Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1053700 Malus domestica HOM05D002009 ORTHO05D006831 9.9e-77 290.0 147 100.0
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 4.8e-63 244.6 142 87.3
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 9.1e-54 213.8 140 76.4
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.2e-53 213.4 142 73.9
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 1.0e-52 210.3 142 73.9
FAN02G0878 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.0e-52 210.3 142 73.9
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.0e-52 210.3 142 73.9
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 2.2e-52 209.1 135 71.1
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 6.5e-52 207.6 142 70.4
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 1.4e-51 206.5 140 72.1
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 1.4e-51 206.5 140 72.1
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 4.2e-51 204.9 140 71.4
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 4.2e-51 204.9 140 71.4
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla HOM05D002009 ORTHO05D006831 9.4e-51 203.8 138 71.0
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 1.2e-50 203.4 138 70.3
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 1.2e-50 203.4 142 68.3
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 2.1e-50 202.6 140 70.0
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 2.1e-50 202.6 140 69.3
Gohir.D08G227001 Gossypium hirsutum HOM05D002009 ORTHO05D006831 2.7e-50 202.2 142 68.3
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 3.6e-50 201.8 140 70.0
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 3.6e-50 201.8 141 70.9
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 4.7e-50 201.4 142 69.7
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 4.7e-50 201.4 142 74.6
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 7.9e-50 200.7 138 69.6
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 7.9e-50 200.7 132 73.5
vmacro04830 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 1.0e-49 200.3 128 73.4
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 1.0e-49 200.3 128 73.4
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 2.3e-49 199.1 142 67.6
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 2.3e-49 199.1 140 68.6
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 3.0e-49 198.7 133 72.2
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 6.7e-49 197.6 140 67.9
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 8.8e-49 197.2 142 66.2
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 8.8e-49 197.2 130 71.5
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 1.5e-48 196.4 130 69.2
TAR633G0909 Trochodendron aralioides HOM05D002009 ORTHO05D006831 2.6e-48 195.7 142 70.4
Lj1g0026508 Lotus japonicus HOM05D002009 ORTHO05D006831 3.3e-48 195.3 140 67.1
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 5.7e-48 194.5 140 67.1
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 5.7e-48 194.5 132 69.7
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 7.4e-48 194.1 142 66.2
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 9.7e-48 193.7 142 68.3
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 9.7e-48 193.7 137 67.2
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 1.7e-47 193.0 140 68.6
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 1.7e-47 193.0 142 67.6
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 3.7e-47 191.8 127 74.8
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 4.8e-47 191.4 133 69.9
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 4.8e-47 191.4 140 66.4
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 4.8e-47 191.4 128 75.0
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 6.3e-47 191.0 127 73.2
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 6.3e-47 191.0 138 67.4
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 8.2e-47 190.7 132 70.5
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 8.2e-47 190.7 127 74.0
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 1.1e-46 190.3 140 64.3
MELO3C004237.2 Cucumis melo HOM05D002009 ORTHO05D006831 1.8e-46 189.5 130 68.5
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 1.8e-46 189.5 140 67.1
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 1.8e-46 189.5 127 73.2
VMungo0540G0763 Vigna mungo HOM05D002009 ORTHO05D006831 1.8e-46 189.5 142 64.8
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 2.4e-46 189.1 133 69.9
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 3.1e-46 188.7 140 67.9
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 3.1e-46 188.7 130 67.7
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 4.1e-46 188.3 139 64.0
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 4.1e-46 188.3 126 74.6
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 5.3e-46 188.0 130 71.5
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 9.1e-46 187.2 124 71.0
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 9.1e-46 187.2 133 70.7
Eucgr.B01945 Eucalyptus grandis HOM05D002009 ORTHO05D006831 1.2e-45 186.8 135 63.7
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 1.5e-45 186.4 138 63.0
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 1.5e-45 186.4 138 64.5
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 2.6e-45 185.7 130 66.9
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 3.4e-45 185.3 124 74.2
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 3.4e-45 185.3 128 70.3
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 4.5e-45 184.9 133 67.7
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 5.9e-45 184.5 133 67.7
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 7.7e-45 184.1 138 63.8
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 7.7e-45 184.1 133 66.9
Cpa.g.sc48.68 Carica papaya HOM05D002009 ORTHO05D006831 1.0e-44 183.7 137 66.4
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 1.3e-44 183.3 124 73.4
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 1.7e-44 183.0 137 65.7
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 3.8e-44 181.8 124 72.6
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 5.0e-44 181.4 132 65.9
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 5.0e-44 181.4 133 68.4
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 8.5e-44 180.6 133 68.4
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 1.1e-43 180.3 113 77.9
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 1.1e-43 180.3 124 71.8
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 1.1e-43 180.3 133 66.9
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 2.5e-43 179.1 133 66.2
Migut.N02070 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.6e-42 176.4 138 65.2
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 5.2e-41 171.4 139 60.4
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 6.7e-41 171.0 142 60.6
unitig_0.g2310 Utricularia gibba HOM05D002009 ORTHO05D006831 1.5e-40 169.9 133 63.2
Psat0s2197g0080 Pisum sativum HOM05D002009 ORTHO05D006831 1.8e-38 162.9 127 60.6
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 1.8e-38 162.9 127 57.5
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 3.1e-38 162.2 141 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 1.2e-37 160.2 112 62.5
HPP92_001324 Vanilla planifolia HOM05D002009 ORTHO05D006831 1.3e-36 156.8 125 60.8
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 1.9e-35 152.9 112 64.3
Mapoly0082s0049 Marchantia polymorpha HOM05D002009 ORTHO05D006831 2.1e-34 149.4 141 51.8
CBR_g26315 Chara braunii HOM05D002009 ORTHO05D006831 5.2e-33 144.8 125 53.6
SMO146G0384 Selaginella moellendorffii HOM05D002009 ORTHO05D006831 1.5e-32 143.3 110 59.1
COL.COLO4_13444 Corchorus olitorius HOM05D002009 ORTHO05D006831 8.2e-31 137.5 103 63.1
Rhsim06G0107400 Rhododendron simsii HOM05D002009 ORTHO05D006831 4.5e-29 131.7 128 53.1
SHI18133 Sapria himalayana HOM05D002009 ORTHO05D006831 1.0e-28 130.6 115 53.0
SEGI_14509 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 1.7e-28 129.8 125 50.4
Cre09.g387400 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D006831 8.0e-26 120.9 107 49.5
MCO12G390 Micromonas commoda HOM05D002009 ORTHO05D006831 5.7e-24 114.8 117 47.0
Cfa024282 Carpinus fangiana HOM05D002009 ORTHO05D006831 4.7e-18 95.1 107 42.1
PRCOL_00003841 Prasinoderma coloniale HOM05D002009 ORTHO05D006831 1.2e-13 80.5 106 35.8
Lj9C88G10 Lonicera japonica HOM05D002009 ORTHO05D006831 4.4e-08 62.0 58 50.0
Haze_26679 Corylus avellana HOM05D002009 ORTHO05D006831 8.3e-07 57.8 92 31.5


User provided reference genes

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