Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 7.4e-308 1059.7 525 100.0
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 7.5e-252 873.6 537 81.6
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.1e-234 816.6 515 79.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 7.8e-233 810.4 538 75.3
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.3e-232 808.9 530 76.4
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 8.6e-232 807.0 538 74.7
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.5e-231 805.4 538 75.3
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 6.8e-229 797.3 538 73.4
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 2.6e-228 795.4 538 73.4
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.4e-226 789.6 540 74.6
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 5.4e-226 787.7 526 74.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 5.4e-226 787.7 530 74.7
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 7.1e-226 787.3 545 72.8
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 3.5e-225 785.0 539 73.3
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.7e-224 782.7 535 73.8
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.7e-224 782.7 536 74.8
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 3.9e-224 781.6 546 73.1
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 6.6e-224 780.8 538 74.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.5e-223 778.9 520 76.3
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 3.3e-223 778.5 531 74.2
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.3e-222 776.5 520 76.5
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 2.8e-222 775.4 533 74.3
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 1.5e-220 769.6 538 72.5
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.3e-219 766.5 538 71.9
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.7e-219 766.1 562 69.6
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 2.2e-219 765.8 534 71.2
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 3.8e-219 765.0 535 72.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 5.4e-218 761.1 540 70.6
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.1e-217 759.2 538 71.6
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.0e-217 757.7 538 71.0
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 3.9e-216 755.0 504 74.2
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.3e-215 751.9 528 71.4
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 3.6e-214 748.4 532 71.6
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.8e-213 746.1 621 63.4
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 6.9e-213 744.2 540 69.4
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 8.4e-211 737.3 539 70.9
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 1.1e-210 736.9 532 70.5
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 9.3e-210 733.8 533 69.2
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 3.5e-209 731.9 526 70.2
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.9e-207 726.1 542 68.3
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.9e-207 726.1 531 70.2
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 5.6e-207 724.5 531 70.2
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 7.4e-207 724.2 499 73.3
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.6e-206 723.0 531 70.2
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 2.8e-206 722.2 537 70.2
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 6.2e-206 721.1 536 68.3
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.1e-205 720.3 536 69.0
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 4.0e-205 718.4 541 68.2
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.3e-205 718.0 536 69.0
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 6.9e-205 717.6 543 66.9
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 9.0e-205 717.2 534 67.6
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 3.4e-204 715.3 537 66.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 7.6e-204 714.1 537 66.7
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.0e-203 713.8 537 66.7
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.3e-203 713.4 537 66.9
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.1e-202 710.3 537 66.5
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 1.4e-202 709.9 536 66.6
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.5e-202 709.1 531 67.4
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.5e-202 709.1 561 65.1
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 4.6e-201 704.9 537 66.7
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 3.0e-200 702.2 518 66.2
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.1e-199 700.3 532 67.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 4.3e-199 698.4 615 62.1
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 7.4e-199 697.6 540 65.6
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.6e-198 696.4 543 65.6
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 8.2e-198 694.1 542 65.5
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 2.6e-196 689.1 544 64.2
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.0e-195 687.2 576 64.8
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.2e-195 686.0 565 61.9
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.2e-195 686.0 565 61.9
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 2.2e-195 686.0 548 63.5
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 9.3e-194 680.6 518 66.0
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 2.1e-193 679.5 518 65.8
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.0e-192 677.2 518 69.5
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.3e-192 676.0 520 65.2
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.1e-191 673.7 448 73.9
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 9.7e-191 670.6 475 73.1
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 6.3e-190 667.9 438 78.1
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 9.0e-189 664.1 534 64.4
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.1e-185 652.9 526 65.4
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 4.6e-185 651.7 491 66.6
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.7e-179 633.3 435 73.8
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.4e-176 623.6 492 63.8
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.5e-175 620.2 651 51.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 3.3e-175 619.0 448 71.4
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 9.7e-175 617.5 594 55.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.9e-162 576.6 519 58.0
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.2e-162 575.9 415 72.3
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 9.8e-159 564.3 438 67.8
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.7e-158 563.5 542 53.5
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.5e-154 549.7 533 53.5
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.9e-147 526.2 472 57.2
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 3.1e-136 489.6 327 74.3
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 6.0e-132 475.3 339 72.0
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.9e-130 470.3 496 53.6
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.4e-119 432.6 286 71.7
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.1e-117 427.9 884 33.7
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.5e-114 417.5 846 34.2
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.5e-114 417.5 357 61.3
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.3e-114 415.2 281 73.3
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 2.1e-113 413.7 266 73.7
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 4.7e-113 412.5 971 30.9
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 5.2e-112 409.1 891 32.0
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 5.2e-112 409.1 306 66.7
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.3e-110 404.4 961 30.7
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 6.4e-102 375.6 241 74.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.9e-99 366.3 313 63.3
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.3e-98 362.8 239 76.2
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.9e-85 320.9 265 62.6
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 2.4e-72 277.3 199 71.9
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 2.7e-68 263.8 287 51.6
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 8.8e-67 258.8 275 51.6
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.3e-62 245.0 173 73.4
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 2.0e-34 151.4 126 65.1
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.6e-31 141.7 790 21.9
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 4.9e-25 120.2 79 72.2
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 1.1e-21 109.0 102 55.9
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 7.3e-21 106.3 250 24.8
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 8.9e-19 99.4 65 80.0
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 4.9e-17 93.6 96 55.2
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.5e-13 81.3 65 60.0
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 3.4e-10 70.9 50 76.0
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 9.9e-10 69.3 325 23.4
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 5.4e-08 63.5 32 87.5
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.0e-06 57.8 50 60.0


User provided reference genes

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