Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1017700 Malus domestica HOM05D004947 ORTHO05D006077 0.0e+00 1207.2 620 100.0
Prupe.6G175000 Prunus persica HOM05D004947 ORTHO05D006077 2.6e-211 739.2 626 65.3
RcHm_v2.0_Chr2g0116221 Rosa chinensis HOM05D004947 ORTHO05D006077 2.2e-170 603.2 529 61.4
FAN28G2993 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.1e-156 555.8 576 55.4
FAN23G3004 Fragaria x ananassa HOM05D004947 ORTHO05D006077 3.0e-151 539.7 623 52.2
FAN26G0674 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.0e-139 500.4 608 50.3
FvH4_1g24620 Fragaria vesca HOM05D004947 ORTHO05D006077 1.3e-138 497.7 608 49.5
QL06p032353 Quercus lobata HOM05D004947 ORTHO05D006077 1.7e-138 497.3 515 54.8
Cfa002745 Carpinus fangiana HOM05D004947 ORTHO05D006077 3.1e-135 486.5 597 51.3
Duzib147G0355 Durio zibethinus HOM05D004947 ORTHO05D006077 6.8e-135 485.3 575 51.5
FAN19G2885 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.7e-133 480.7 608 48.4
Thecc.01G111600 Theobroma cacao HOM05D004947 ORTHO05D006077 4.3e-129 466.1 624 47.8
CANSAT01G0537 Cannabis sativa HOM05D004947 ORTHO05D006077 2.8e-128 463.4 674 45.4
Gohir.A02G134000 Gossypium hirsutum HOM05D004947 ORTHO05D006077 3.6e-128 463.0 576 48.8
CiPaw.03G134900 Carya illinoinensis HOM05D004947 ORTHO05D006077 4.7e-128 462.6 444 57.9
Gohir.D03G045400 Gossypium hirsutum HOM05D004947 ORTHO05D006077 4.7e-128 462.6 601 47.1
Gorai.003G046500 Gossypium raimondii HOM05D004947 ORTHO05D006077 1.8e-127 460.7 601 47.3
Ciclev10025244m.g Citrus clementina HOM05D004947 ORTHO05D006077 2.0e-126 457.2 581 47.8
TAR625G0980 Trochodendron aralioides HOM05D004947 ORTHO05D006077 2.6e-126 456.8 594 46.8
TAR376G0315 Trochodendron aralioides HOM05D004947 ORTHO05D006077 9.2e-124 448.4 597 46.9
COL.COLO4_11020 Corchorus olitorius HOM05D004947 ORTHO05D006077 6.0e-123 445.7 595 46.1
Dinv42703 Davidia involucrata HOM05D004947 ORTHO05D006077 2.8e-120 436.8 630 46.0
Atru.chr4.372 Acer truncatum HOM05D004947 ORTHO05D006077 1.4e-119 434.5 530 50.2
Atru.chr4.373 Acer truncatum HOM05D004947 ORTHO05D006077 1.4e-119 434.5 530 50.2
TWI74G1183 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 1.9e-116 424.1 606 45.5
CiPaw.04G092600 Carya illinoinensis HOM05D004947 ORTHO05D006077 2.4e-116 423.7 426 56.3
Ca_17699_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 7.8e-115 418.7 515 47.4
Sc03g0004250 Simmondsia chinensis HOM05D004947 ORTHO05D006077 1.9e-113 414.1 583 44.6
ClCG01G019270 Citrullus lanatus HOM05D004947 ORTHO05D006077 5.6e-113 412.5 577 44.0
Haze_25032 Corylus avellana HOM05D004947 ORTHO05D006077 9.6e-113 411.8 519 48.6
CsaV3_6G045960 Cucumis sativus L. HOM05D004947 ORTHO05D006077 6.2e-112 409.1 512 46.5
vmacro12909 Vaccinium macrocarpon HOM05D004947 ORTHO05D006077 8.1e-112 408.7 634 43.2
Potri.005G083600 Populus trichocarpa HOM05D004947 ORTHO05D006077 1.1e-111 408.3 577 44.9
Manes.12G141400 Manihot esculenta HOM05D004947 ORTHO05D006077 3.1e-111 406.8 555 45.4
Lj1g0026570 Lotus japonicus HOM05D004947 ORTHO05D006077 8.9e-111 405.2 521 44.7
Nitab4.5_0002843g0020 Nicotiana tabacum HOM05D004947 ORTHO05D006077 4.4e-110 402.9 601 43.9
arahy.Tifrunner.gnm1.ann1.XRAY4T Arachis hypogaea HOM05D004947 ORTHO05D006077 9.9e-110 401.7 609 42.2
Aqoxy5G01985_Aqoxy5G01986 Aquilegia oxysepala HOM05D004947 ORTHO05D006077 1.3e-109 401.4 521 46.3
Lalb_Chr11g0068011 Lupinus albus HOM05D004947 ORTHO05D006077 3.2e-108 396.7 577 43.5
Sabra07G0068900 Salix brachista HOM05D004947 ORTHO05D006077 3.2e-108 396.7 618 42.2
Sed0009808 Sechium edule HOM05D004947 ORTHO05D006077 3.2e-108 396.7 438 50.0
MBI03_g11138_MAGBIO Magnolia biondii HOM05D004947 ORTHO05D006077 7.1e-108 395.6 573 45.0
TPR.G2194 Trifolium pratense HOM05D004947 ORTHO05D006077 7.1e-108 395.6 504 45.8
TWI53G2111 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 1.6e-107 394.4 554 44.8
arahy.Tifrunner.gnm1.ann1.V2ZAQJ Arachis hypogaea HOM05D004947 ORTHO05D006077 2.1e-107 394.0 626 41.9
TPR.G6951 Trifolium pratense HOM05D004947 ORTHO05D006077 2.7e-107 393.7 521 44.3
Actinidia16961 Actinidia chinensis HOM05D004947 ORTHO05D006077 3.5e-107 393.3 600 44.2
Medtr3g094760 Medicago truncatula HOM05D004947 ORTHO05D006077 4.6e-107 392.9 524 43.7
Ca_16888_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 1.0e-106 391.7 539 43.4
Manes.13G077600 Manihot esculenta HOM05D004947 ORTHO05D006077 1.1e-105 388.3 423 51.3
HanXRQChr14g0446211 Helianthus annuus HOM05D004947 ORTHO05D006077 4.3e-105 386.3 540 44.4
Nn1g00054 Nelumbo nucifera HOM05D004947 ORTHO05D006077 5.6e-105 386.0 438 49.5
Nitab4.5_0000156g0160 Nicotiana tabacum HOM05D004947 ORTHO05D006077 4.8e-104 382.9 628 41.1
PSO675G5310 Papaver somniferum HOM05D004947 ORTHO05D006077 2.4e-103 380.6 615 39.8
Sopen04g023630 Solanum pennellii HOM05D004947 ORTHO05D006077 6.9e-103 379.0 606 42.7
Oeu056486.1 Olea europaea HOM05D004947 ORTHO05D006077 7.6e-102 375.6 522 44.6
PSO541G1244 Papaver somniferum HOM05D004947 ORTHO05D006077 2.9e-101 373.6 610 39.7
THA.LOC104818481 Tarenaya hassleriana HOM05D004947 ORTHO05D006077 2.9e-101 373.6 530 43.8
PGR102G0173 Punica granatum HOM05D004947 ORTHO05D006077 4.9e-101 372.9 570 41.6
PGSC0003DMG402012957 Solanum tuberosum HOM05D004947 ORTHO05D006077 8.4e-101 372.1 599 41.6
CAN.G1854.1 Capsicum annuum HOM05D004947 ORTHO05D006077 1.9e-100 370.9 546 42.9
EL10Ac6g14744 Beta vulgaris HOM05D004947 ORTHO05D006077 2.4e-100 370.5 577 44.0
Cc07_g16050 Coffea canephora HOM05D004947 ORTHO05D006077 2.4e-100 370.5 623 40.0
Rhsim10G0151500 Rhododendron simsii HOM05D004947 ORTHO05D006077 4.2e-100 369.8 650 39.5
Hund19664 Selenicereus undatus HOM05D004947 ORTHO05D006077 1.2e-99 368.2 606 43.7
Peaxi162Scf01006g00315 Petunia axillaris HOM05D004947 ORTHO05D006077 3.5e-99 366.7 532 43.0
HanXRQChr15g0471901 Helianthus annuus HOM05D004947 ORTHO05D006077 4.6e-99 366.3 522 42.5
AUR62003314 Chenopodium quinoa HOM05D004947 ORTHO05D006077 6.0e-99 365.9 612 40.5
Solyc04g054170.4 Solanum lycopersicum HOM05D004947 ORTHO05D006077 1.0e-98 365.2 625 41.0
FvH4_1g22140 Fragaria vesca HOM05D004947 ORTHO05D006077 1.7e-98 364.4 399 54.4
Ah.02g124420 Amaranthus hybridus HOM05D004947 ORTHO05D006077 1.5e-97 361.3 573 42.1
Lsat_1_v5_gn_2_65461 Lactuca sativa HOM05D004947 ORTHO05D006077 1.5e-97 361.3 592 41.2
Lj4A878G34 Lonicera japonica HOM05D004947 ORTHO05D006077 7.4e-97 359.0 418 49.5
Eucgr.H04830 Eucalyptus grandis HOM05D004947 ORTHO05D006077 9.6e-97 358.6 424 46.0
Glyma.06G145800 Glycine max HOM05D004947 ORTHO05D006077 3.6e-96 356.7 590 38.5
Psat5g067160 Pisum sativum HOM05D004947 ORTHO05D006077 5.3e-95 352.8 480 42.1
DCAR_014256 Daucus carota HOM05D004947 ORTHO05D006077 9.0e-95 352.1 536 41.4
SGA_v2.0_scaffold47G17714 Striga asiatica HOM05D004947 ORTHO05D006077 5.8e-94 349.4 619 38.9
Migut.L00078 Erythranthe guttata HOM05D004947 ORTHO05D006077 8.4e-93 345.5 522 41.6
Phvul.009G140300 Phaseolus vulgaris HOM05D004947 ORTHO05D006077 1.9e-92 344.4 555 39.1
Sp2g28010 Schrenkiella parvula HOM05D004947 ORTHO05D006077 4.2e-92 343.2 600 38.2
ECA238G1011 Erigeron canadensis HOM05D004947 ORTHO05D006077 7.1e-92 342.4 517 41.8
ATR0171G039 Amborella trichopoda HOM05D004947 ORTHO05D006077 2.3e-90 337.4 438 41.6
unitig_88.g27735 Utricularia gibba HOM05D004947 ORTHO05D006077 2.5e-89 334.0 607 36.7
Aa31LG1G17040 Aethionema arabicum HOM05D004947 ORTHO05D006077 3.3e-89 333.6 566 38.3
Psat7g052040 Pisum sativum HOM05D004947 ORTHO05D006077 3.3e-89 333.6 364 51.1
SalBow5G4162 Salvia bowleyana HOM05D004947 ORTHO05D006077 3.3e-89 333.6 648 38.4
CDE05G2725 Ceratophyllum demersum HOM05D004947 ORTHO05D006077 2.8e-88 330.5 590 38.0
HPP92_005876 Vanilla planifolia HOM05D004947 ORTHO05D006077 2.8e-88 330.5 443 42.7
GSVIVG01022215001 Vitis vinifera HOM05D004947 ORTHO05D006077 3.7e-88 330.1 426 50.7
FAN23G2837 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.8e-88 329.7 354 54.8
A06p31700 Brassica napus HOM05D004947 ORTHO05D006077 1.1e-87 328.6 524 39.5
BolC3t18387H Brassica oleracea HOM05D004947 ORTHO05D006077 4.0e-87 326.6 524 39.5
MELO3C007803.2 Cucumis melo HOM05D004947 ORTHO05D006077 1.2e-86 325.1 537 40.8
BcaC01g02724 Brassica carinata HOM05D004947 ORTHO05D006077 2.6e-86 323.9 524 39.3
C03p61260 Brassica napus HOM05D004947 ORTHO05D006077 2.6e-86 323.9 524 39.3
BcaB02g09842 Brassica carinata HOM05D004947 ORTHO05D006077 1.0e-85 322.0 525 38.5
BraA06t26105Z Brassica rapa HOM05D004947 ORTHO05D006077 8.4e-85 318.9 594 36.5
MELO3C007802.2 Cucumis melo HOM05D004947 ORTHO05D006077 1.4e-84 318.2 514 40.7
CARHR293840 Cardamine hirsuta HOM05D004947 ORTHO05D006077 1.9e-84 317.8 515 39.2
SHI11672 Sapria himalayana HOM05D004947 ORTHO05D006077 1.8e-79 301.2 446 41.0
QL93p0275_0011 Quercus lobata HOM05D004947 ORTHO05D006077 2.0e-78 297.7 375 49.9
Zm00001eb364640 Zea mays HOM05D004947 ORTHO05D006077 3.4e-78 297.0 491 36.9
BcaB04g20000 Brassica carinata HOM05D004947 ORTHO05D006077 5.9e-78 296.2 561 36.2
Thhalv10003912m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 2.9e-77 293.9 606 37.0
AUR62016269 Chenopodium quinoa HOM05D004947 ORTHO05D006077 1.1e-76 292.0 528 40.0
AL8G42430 Arabidopsis lyrata HOM05D004947 ORTHO05D006077 1.6e-75 288.1 519 36.2
Os02g0770100 Oryza sativa ssp. japonica HOM05D004947 ORTHO05D006077 1.6e-75 288.1 525 35.6
AT5G64930 Arabidopsis thaliana HOM05D004947 ORTHO05D006077 7.9e-75 285.8 612 33.5
Carub.0008s2576 Capsella rubella HOM05D004947 ORTHO05D006077 1.0e-69 268.9 518 33.2
Sabra05G0068700 Salix brachista HOM05D004947 ORTHO05D006077 6.3e-64 249.6 351 45.9
Potri.007G082100 Populus trichocarpa HOM05D004947 ORTHO05D006077 1.8e-63 248.1 439 41.2
CSS0010100 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 2.4e-63 247.7 448 43.1
Thhalv10019768m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 3.0e-58 230.7 553 31.8
CSS0029975 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 8.8e-58 229.2 294 50.7
SalBow5G3891 Salvia bowleyana HOM05D004947 ORTHO05D006077 2.0e-57 228.0 245 50.6
Cpa.g.sc196.3 Carica papaya HOM05D004947 ORTHO05D006077 9.1e-47 192.6 175 54.9
Thhalv10005311m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 1.9e-44 184.9 262 39.7
Nn1g05196 Nelumbo nucifera HOM05D004947 ORTHO05D006077 8.8e-42 176.0 174 51.1
FAN28G0567 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.0e-41 174.9 226 48.2
VMungo1309G1623 Vigna mungo HOM05D004947 ORTHO05D006077 8.3e-40 169.5 393 34.1
Zm00001eb193490 Zea mays HOM05D004947 ORTHO05D006077 1.5e-36 158.7 352 33.2
VMungo1309G0633 Vigna mungo HOM05D004947 ORTHO05D006077 1.5e-33 148.7 145 47.6
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 2.0e-33 148.3 313 31.3
Mapoly0107s0002 Marchantia polymorpha HOM05D004947 ORTHO05D006077 5.9e-30 136.7 291 33.0
Mapoly0483s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 5.6e-28 130.2 291 32.3
Pp3c21_530 Physcomitrium patens HOM05D004947 ORTHO05D006077 7.3e-28 129.8 246 34.6
AagrBONN_evm.TU.Sc2ySwM_228.3588 Anthoceros agrestis HOM05D004947 ORTHO05D006077 3.0e-26 124.4 322 28.9
Pp3c22_5670 Physcomitrium patens HOM05D004947 ORTHO05D006077 1.8e-23 115.2 215 34.4
Mapoly0002s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 1.2e-22 112.5 286 30.8
Nn5g28924 Nelumbo nucifera HOM05D004947 ORTHO05D006077 2.0e-22 111.7 148 50.0
SGA_v2.0_scaffold47G17717 Striga asiatica HOM05D004947 ORTHO05D006077 1.3e-21 109.0 131 44.3
CSS0006585 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 9.5e-20 102.8 87 50.6
CSS0047108 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 9.5e-20 102.8 87 50.6
CBR_g4593 Chara braunii HOM05D004947 ORTHO05D006077 9.2e-15 86.3 322 25.5
FAN19G2927 Fragaria x ananassa HOM05D004947 ORTHO05D006077 7.8e-14 83.2 151 42.4
BcaB02g07604 Brassica carinata HOM05D004947 ORTHO05D006077 8.6e-13 79.7 319 23.2
FAN26G2475 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.5e-12 79.0 153 41.2
A07p23420 Brassica napus HOM05D004947 ORTHO05D006077 5.6e-12 77.0 259 22.8
BraA07t30005Z Brassica rapa HOM05D004947 ORTHO05D006077 5.6e-12 77.0 259 22.8
BcaC08g44843 Brassica carinata HOM05D004947 ORTHO05D006077 3.6e-11 74.3 312 22.4
C06p24500 Brassica napus HOM05D004947 ORTHO05D006077 3.6e-11 74.3 312 22.4
BolC6t37597H Brassica oleracea HOM05D004947 ORTHO05D006077 3.6e-11 74.3 312 22.4
CBR_g49522 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-10 72.0 257 24.5
Nn1g00055 Nelumbo nucifera HOM05D004947 ORTHO05D006077 4.0e-10 70.9 78 51.3
FAN28G1315 Fragaria x ananassa HOM05D004947 ORTHO05D006077 5.8e-09 67.0 182 36.3
Medtr7g109250 Medicago truncatula HOM05D003601 ORTHO05D004896 7.8e-06 56.6 55 47.3


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