Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G178 Micromonas commoda HOM05D003364 ORTHO05D003795 4.0e-112 408.3 236 100.0
SEGI_00976 Sequoiadendron giganteum HOM05D003364 ORTHO05D003795 4.6e-15 85.9 173 31.8
Mapoly0070s0080 Marchantia polymorpha HOM05D003364 ORTHO05D003795 2.1e-12 77.0 201 29.4
Os03g0186800 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 2.1e-12 77.0 166 30.7
HanXRQChr13g0400531 Helianthus annuus HOM05D003364 ORTHO05D003795 8.1e-12 75.1 143 32.2
SMO147G0421 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 1.1e-11 74.7 142 29.6
CBR_g30234 Chara braunii HOM05D003364 ORTHO05D003795 1.8e-11 73.9 156 26.9
Thhalv10017224m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 2.3e-11 73.6 174 30.5
HanXRQChr11g0345961 Helianthus annuus HOM05D003364 ORTHO05D003795 3.1e-11 73.2 172 30.2
HanXRQChr01g0019311 Helianthus annuus HOM05D003364 ORTHO05D003795 4.0e-11 72.8 169 30.2
CARHR162970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 5.2e-11 72.4 167 29.9
Sp4g18950 Schrenkiella parvula HOM05D003364 ORTHO05D003795 5.2e-11 72.4 174 29.3
SMO144G0012 Selaginella moellendorffii HOM05D003364 ORTHO05D003795 5.2e-11 72.4 142 28.9
AL4G32860 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 6.8e-11 72.0 174 29.9
BcaB02g09341 Brassica carinata HOM05D003364 ORTHO05D003795 6.8e-11 72.0 171 29.8
CARHR130970 Cardamine hirsuta HOM05D003364 ORTHO05D003795 8.9e-11 71.6 174 29.9
Lsat_1_v5_gn_6_28160 Lactuca sativa HOM05D003364 ORTHO05D003795 8.9e-11 71.6 143 30.8
A04p06260 Brassica napus HOM05D003364 ORTHO05D003795 1.2e-10 71.2 173 29.5
BraA04t16331Z Brassica rapa HOM05D003364 ORTHO05D003795 1.2e-10 71.2 173 29.5
BcaC03g18177 Brassica carinata HOM05D003364 ORTHO05D003795 1.5e-10 70.9 171 29.2
Thhalv10023701m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 1.5e-10 70.9 174 29.9
AT2G36680 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 2.0e-10 70.5 174 29.3
Zm00001eb006510 Zea mays HOM05D003364 ORTHO05D003795 2.0e-10 70.5 177 28.2
BcaB02g08535 Brassica carinata HOM05D003364 ORTHO05D003795 3.4e-10 69.7 173 29.5
BcaC02g09182 Brassica carinata HOM05D003364 ORTHO05D003795 3.4e-10 69.7 173 29.5
BcaC02g11785 Brassica carinata HOM05D003364 ORTHO05D003795 3.4e-10 69.7 171 29.2
C04p11370 Brassica napus HOM05D000165 ORTHO05D003795 3.4e-10 69.7 171 29.2
BolC4t22777H Brassica oleracea HOM05D003364 ORTHO05D003795 3.4e-10 69.7 171 29.2
BolC4t22795H Brassica oleracea HOM05D003364 ORTHO05D003795 3.4e-10 69.7 171 29.2
BolC4t25549H Brassica oleracea HOM05D003364 ORTHO05D003795 3.4e-10 69.7 173 29.5
CAN.G541.25 Capsicum annuum HOM05D003364 ORTHO05D003795 3.4e-10 69.7 175 29.1
Ca_08937_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 3.4e-10 69.7 195 27.2
Ca_30110_v3 Cicer arietinum L. HOM05D003364 ORTHO05D003795 3.4e-10 69.7 195 27.2
Sp5g09200 Schrenkiella parvula HOM05D003364 ORTHO05D003795 3.4e-10 69.7 174 29.9
AT3G53120 Arabidopsis thaliana HOM05D003364 ORTHO05D003795 4.4e-10 69.3 171 29.2
Thhalv10010721m.g Eutrema salsugineum HOM05D003364 ORTHO05D003795 5.8e-10 68.9 175 29.7
SGA_v2.0_scaffold75G24816 Striga asiatica HOM05D003364 ORTHO05D003795 5.8e-10 68.9 136 30.9
VMungo1383G1043 Vigna mungo HOM05D003364 ORTHO05D003795 5.8e-10 68.9 146 29.5
EL10Ac7g16703 Beta vulgaris HOM05D003364 ORTHO05D003795 7.6e-10 68.6 184 29.3
BraA05t19876Z Brassica rapa HOM05D003364 ORTHO05D003795 7.6e-10 68.6 171 28.7
Carub.0004s1850 Capsella rubella HOM05D003364 ORTHO05D003795 7.6e-10 68.6 169 29.6
Eucgr.A01593 Eucalyptus grandis HOM05D003364 ORTHO05D003795 7.6e-10 68.6 160 28.1
Glyma.03G188100 Glycine max HOM05D003364 ORTHO05D003795 7.6e-10 68.6 171 29.8
Os03g0572300 Oryza sativa ssp. japonica HOM05D003364 ORTHO05D003795 7.6e-10 68.6 179 27.9
THA.LOC104818582 Tarenaya hassleriana HOM05D003364 ORTHO05D003795 7.6e-10 68.6 174 29.9
AL5G34000 Arabidopsis lyrata HOM05D003364 ORTHO05D003795 9.9e-10 68.2 171 29.2
vmacro07356 Vaccinium macrocarpon HOM05D003364 ORTHO05D003795 1.3e-09 67.8 176 29.0
Carub.0005s1965 Capsella rubella HOM05D003364 ORTHO05D003795 2.2e-09 67.0 174 28.7
Glyma.19G188300 Glycine max HOM05D003364 ORTHO05D003795 2.2e-09 67.0 171 29.2
Oeu045244.1 Olea europaea HOM05D003364 ORTHO05D003795 2.2e-09 67.0 154 29.2
AUR62040195 Chenopodium quinoa HOM05D003364 ORTHO05D003795 2.9e-09 66.6 190 27.4
Potri.006G119200 Populus trichocarpa HOM05D003364 ORTHO05D003795 4.9e-09 65.9 174 27.6
Cc06_g04780 Coffea canephora HOM05D003364 ORTHO05D003795 6.4e-09 65.5 163 30.7
PSO339G5958 Papaver somniferum HOM05D003364 ORTHO05D003795 6.4e-09 65.5 164 27.4
Sabra16G0100200 Salix brachista HOM05D003364 ORTHO05D003795 6.4e-09 65.5 173 28.3
Haze_19478 Corylus avellana HOM05D003364 ORTHO05D003795 8.4e-09 65.1 140 30.0
Migut.F01371 Erythranthe guttata HOM05D003364 ORTHO05D003795 8.4e-09 65.1 186 27.4
Medtr7g102780 Medicago truncatula HOM05D003364 ORTHO05D003795 8.4e-09 65.1 182 26.9
Oeu040563.2 Olea europaea HOM05D003364 ORTHO05D003795 8.4e-09 65.1 143 29.4
MD12G1102900 Malus domestica HOM05D003364 ORTHO05D003795 1.1e-08 64.7 177 28.2
Pp3c1_40630 Physcomitrium patens HOM05D003364 ORTHO05D003795 1.1e-08 64.7 191 26.2
HPP92_020787 Vanilla planifolia HOM05D003364 ORTHO05D003795 1.1e-08 64.7 160 28.8
Zm00001eb401560 Zea mays HOM05D003364 ORTHO05D003795 1.1e-08 64.7 183 28.4
CiPaw.09G005100 Carya illinoinensis HOM05D003364 ORTHO05D003795 1.4e-08 64.3 175 28.6
Lj3A995G63 Lonicera japonica HOM05D003364 ORTHO05D003795 1.4e-08 64.3 185 28.1
Sed0022654 Sechium edule HOM05D003364 ORTHO05D003795 1.4e-08 64.3 175 29.7
Aqoxy2G01564 Aquilegia oxysepala HOM05D003364 ORTHO05D003795 2.4e-08 63.5 166 27.7
Cpa.g.sc5.126 Carica papaya HOM05D003364 ORTHO05D003795 2.4e-08 63.5 172 29.1
Migut.J00476 Erythranthe guttata HOM05D003364 ORTHO05D003795 2.4e-08 63.5 186 26.9
PGR142G3973 Punica granatum HOM05D003364 ORTHO05D003795 2.4e-08 63.5 153 29.4
Sc20g0005750 Simmondsia chinensis HOM05D003364 ORTHO05D003795 2.4e-08 63.5 183 28.4
Aa31LG10G8290 Aethionema arabicum HOM05D003364 ORTHO05D003795 3.2e-08 63.2 172 27.3
ATR1158G038 Amborella trichopoda HOM05D003364 ORTHO05D003795 3.2e-08 63.2 184 29.9
MSTRG.5787 Avicennia marina HOM05D003364 ORTHO05D003795 3.2e-08 63.2 143 29.4
Lj1A203T55 Lonicera japonica HOM05D003364 ORTHO05D003795 3.2e-08 63.2 175 26.9
Manes.09G048862 Manihot esculenta HOM05D003364 ORTHO05D003795 3.2e-08 63.2 187 28.9
Pp3c2_570 Physcomitrium patens HOM05D003364 ORTHO05D003795 3.2e-08 63.2 175 28.0
Psat3g038040 Pisum sativum HOM05D003364 ORTHO05D003795 3.2e-08 63.2 184 27.7
Peaxi162Scf00110g00816 Petunia axillaris HOM05D003364 ORTHO05D003795 4.1e-08 62.8 178 26.4
TWI77G0900 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 4.1e-08 62.8 180 27.2
CsaV3_3G036470 Cucumis sativus L. HOM05D003364 ORTHO05D003795 5.4e-08 62.4 187 27.3
Migut.J00474 Erythranthe guttata HOM05D003364 ORTHO05D003795 7.1e-08 62.0 186 26.3
PSO801G0728 Papaver somniferum HOM05D003364 ORTHO05D003795 7.1e-08 62.0 181 27.6
QL07p041392 Quercus lobata HOM05D003364 ORTHO05D003795 7.1e-08 62.0 175 28.0
CSS0048678 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 9.2e-08 61.6 176 27.8
MELO3C009407.2 Cucumis melo HOM05D003364 ORTHO05D003795 9.2e-08 61.6 187 27.3
Lalb_Chr02g0155361 Lupinus albus HOM05D003364 ORTHO05D003795 9.2e-08 61.6 172 28.5
Sabra06G0093800 Salix brachista HOM05D003364 ORTHO05D003795 9.2e-08 61.6 164 27.4
TAR633G2316 Trochodendron aralioides HOM05D003364 ORTHO05D003795 1.2e-07 61.2 179 27.9
QL07p041377 Quercus lobata HOM05D003364 ORTHO05D003795 1.6e-07 60.8 175 28.0
TWI74G0085 Tripterygium wilfordii HOM05D003364 ORTHO05D003795 1.6e-07 60.8 176 27.8
ATR0661G393 Amborella trichopoda HOM05D003364 ORTHO05D003795 2.1e-07 60.5 177 27.7
Duzib128G0277 Durio zibethinus HOM05D003364 ORTHO05D003795 2.1e-07 60.5 165 26.7
FvH4_6g17210 Fragaria vesca HOM05D003364 ORTHO05D003795 2.1e-07 60.5 180 26.1
FAN02G0897 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.1e-07 60.5 180 26.1
FAN14G4580 Fragaria x ananassa HOM05D003364 ORTHO05D003795 2.1e-07 60.5 180 26.1
Potri.016G097000 Populus trichocarpa HOM05D003364 ORTHO05D003795 2.1e-07 60.5 173 27.2
RcHm_v2.0_Chr3g0471291 Rosa chinensis HOM05D003364 ORTHO05D003795 2.1e-07 60.5 172 27.9
COL.COLO4_22254 Corchorus olitorius HOM05D003364 ORTHO05D003795 2.7e-07 60.1 184 26.6
TPR.G31682 Trifolium pratense HOM05D003364 ORTHO05D003795 2.7e-07 60.1 173 26.6
GSVIVG01033713001 Vitis vinifera HOM05D003364 ORTHO05D003795 2.7e-07 60.1 179 27.9
Ah.09g232710 Amaranthus hybridus HOM05D000736 ORTHO05D007313 4.6e-07 59.3 183 25.7
EL10As10g23959 Beta vulgaris HOM05D003364 ORTHO05D003795 4.6e-07 59.3 179 27.4
Nitab4.5_0009839g0030 Nicotiana tabacum HOM05D003364 ORTHO05D003795 4.6e-07 59.3 176 27.3
CSS0050150 Camellia sinensis var. sinensis HOM05D003364 ORTHO05D003795 6.0e-07 58.9 176 27.8
Nn6g35170 Nelumbo nucifera HOM05D003364 ORTHO05D003795 6.0e-07 58.9 180 27.8
Thecc.05G075500 Theobroma cacao HOM05D003364 ORTHO05D003795 6.0e-07 58.9 184 26.1
CiPaw.10G002500 Carya illinoinensis HOM05D003364 ORTHO05D003795 7.8e-07 58.5 184 27.2
Gohir.D11G342100 Gossypium hirsutum HOM05D003364 ORTHO05D003795 1.0e-06 58.2 180 27.2
Gorai.007G372100 Gossypium raimondii HOM05D003364 ORTHO05D003795 1.0e-06 58.2 180 27.2
MD14G1097000 Malus domestica HOM05D003364 ORTHO05D003795 1.0e-06 58.2 177 26.6
Phvul.001G183500 Phaseolus vulgaris HOM05D003364 ORTHO05D003795 1.3e-06 57.8 185 27.0
Duzib093G1696 Durio zibethinus HOM05D003364 ORTHO05D003795 1.7e-06 57.4 177 25.4
Nn2g13901 Nelumbo nucifera HOM05D003364 ORTHO05D003795 1.7e-06 57.4 176 28.4
Nitab4.5_0000725g0070 Nicotiana tabacum HOM05D003364 ORTHO05D003795 1.7e-06 57.4 176 26.7
Gohir.A11G323000 Gossypium hirsutum HOM05D003364 ORTHO05D003795 2.3e-06 57.0 168 26.2
Gohir.D04G106900 Gossypium hirsutum HOM05D003364 ORTHO05D003795 3.0e-06 56.6 179 26.3
Gorai.009G411000 Gossypium raimondii HOM05D003364 ORTHO05D003795 3.0e-06 56.6 179 26.3
Oeu031866.1 Olea europaea HOM05D003364 ORTHO05D003795 3.0e-06 56.6 106 32.1
Gohir.A04G068400 Gossypium hirsutum HOM05D003364 ORTHO05D003795 3.9e-06 56.2 179 26.3
Lsat_1_v5_gn_2_100520 Lactuca sativa HOM05D003364 ORTHO05D003795 5.1e-06 55.8 185 26.5
Peaxi162Scf00146g00018 Petunia axillaris HOM05D003364 ORTHO05D003795 6.6e-06 55.5 191 27.7
Duzib106G1154 Durio zibethinus HOM05D003364 ORTHO05D003795 8.6e-06 55.1 189 26.5


User provided reference genes

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