Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G532 Micromonas commoda HOM05D003168 ORTHO05D003590 0.0e+00 1174.1 577 100.0
Cc06_g21780 Coffea canephora HOM05D003168 ORTHO05D003590 5.3e-25 120.2 257 32.7
FAN17G2428 Fragaria x ananassa HOM05D003168 ORTHO05D003590 9.1e-25 119.4 295 33.2
Os08g0517700 Oryza sativa ssp. japonica HOM05D003168 ORTHO05D003590 9.1e-25 119.4 286 33.6
FAN22G0675 Fragaria x ananassa HOM05D003168 ORTHO05D003590 1.2e-24 119.0 295 33.2
Zm00001eb174710 Zea mays HOM05D003168 ORTHO05D003590 1.2e-24 119.0 294 32.0
AagrBONN_evm.TU.Sc2ySwM_228.564 Anthoceros agrestis HOM05D003168 ORTHO05D003590 4.5e-24 117.1 309 29.8
FAN07G0893 Fragaria x ananassa HOM05D003168 ORTHO05D003590 4.5e-24 117.1 295 33.6
Mapoly0087s0057 Marchantia polymorpha HOM05D003168 ORTHO05D003590 5.9e-24 116.7 295 33.2
FvH4_4g07390 Fragaria vesca HOM05D003168 ORTHO05D003590 2.9e-23 114.4 295 32.9
FAN12G4144 Fragaria x ananassa HOM05D003168 ORTHO05D003590 2.9e-23 114.4 295 32.9
BcaB08g36086 Brassica carinata HOM05D003168 ORTHO05D003590 3.8e-23 114.0 269 32.7
SGA_v2.0_scaffold21G09649 Striga asiatica HOM05D003168 ORTHO05D003590 6.5e-23 113.2 259 34.0
Carub.0008s1774 Capsella rubella HOM05D003168 ORTHO05D003590 1.1e-22 112.5 260 31.9
Aa31LG3G13130 Aethionema arabicum HOM05D003168 ORTHO05D003590 1.9e-22 111.7 270 32.6
CiPaw.08G033300 Carya illinoinensis HOM05D003168 ORTHO05D003590 1.9e-22 111.7 313 29.7
Thhalv10015272m.g Eutrema salsugineum HOM05D003168 ORTHO05D003590 1.9e-22 111.7 269 32.3
Lj4g0006475 Lotus japonicus HOM05D003168 ORTHO05D003590 1.9e-22 111.7 289 30.4
AL8G33210 Arabidopsis lyrata HOM05D003168 ORTHO05D003590 2.5e-22 111.3 260 32.3
MSTRG.10446 Avicennia marina HOM05D003168 ORTHO05D003590 2.5e-22 111.3 259 32.0
CARHR271040 Cardamine hirsuta HOM05D003168 ORTHO05D003590 2.5e-22 111.3 260 32.7
Sp7g23890 Schrenkiella parvula HOM05D003168 ORTHO05D003590 2.5e-22 111.3 269 32.3
Actinidia01284 Actinidia chinensis HOM05D003168 ORTHO05D003590 3.2e-22 110.9 284 32.0
Peaxi162Scf00152g00412 Petunia axillaris HOM05D003168 ORTHO05D003590 3.2e-22 110.9 257 32.3
Oeu064542.1 Olea europaea HOM05D003168 ORTHO05D003590 4.2e-22 110.5 258 32.2
AT5G57240 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 7.2e-22 109.8 260 31.9
Peaxi162Scf00201g00015 Petunia axillaris HOM05D003168 ORTHO05D003590 7.2e-22 109.8 284 32.0
BcaC04g19985 Brassica carinata HOM05D003168 ORTHO05D003590 9.4e-22 109.4 269 32.0
Medtr4g127510 Medicago truncatula HOM05D003168 ORTHO05D003590 9.4e-22 109.4 293 30.7
GSVIVG01010873001 Vitis vinifera HOM05D003168 ORTHO05D003590 1.2e-21 109.0 266 32.7
MD13G1243400 Malus domestica HOM05D003168 ORTHO05D003590 2.7e-21 107.8 288 33.0
Oeu044679.2 Olea europaea HOM05D003168 ORTHO05D003590 3.6e-21 107.5 284 30.6
Prupe.1G076800 Prunus persica HOM05D003168 ORTHO05D003590 3.6e-21 107.5 270 32.6
SalBow5G2766 Salvia bowleyana HOM05D003168 ORTHO05D003590 3.6e-21 107.5 306 29.7
SMO118G0261 Selaginella moellendorffii HOM05D003168 ORTHO05D003590 3.6e-21 107.5 292 32.5
BolC9t57759H Brassica oleracea HOM05D003168 ORTHO05D003590 6.1e-21 106.7 271 32.1
Duzib168G2272 Durio zibethinus HOM05D003168 ORTHO05D003590 6.1e-21 106.7 284 30.3
Peaxi162Scf00014g00101 Petunia axillaris HOM05D003168 ORTHO05D003590 6.1e-21 106.7 284 31.3
MD16G1249900 Malus domestica HOM05D003168 ORTHO05D003590 8.0e-21 106.3 258 33.7
Aqoxy7G02763 Aquilegia oxysepala HOM05D003168 ORTHO05D003590 1.0e-20 105.9 260 32.7
CANSAT11G2081 Cannabis sativa HOM05D003168 ORTHO05D003590 1.0e-20 105.9 256 31.2
Sc14g0001440 Simmondsia chinensis HOM05D003168 ORTHO05D003590 1.0e-20 105.9 299 28.4
Gohir.D03G147400 Gossypium hirsutum HOM05D003168 ORTHO05D003590 1.4e-20 105.5 266 32.0
Gorai.003G154900 Gossypium raimondii HOM05D003168 ORTHO05D003590 1.4e-20 105.5 266 32.0
Peaxi162Scf00517g00001 Petunia axillaris HOM05D003168 ORTHO05D003590 1.4e-20 105.5 265 31.7
Thhalv10025441m.g Eutrema salsugineum HOM05D003168 ORTHO05D003590 1.8e-20 105.1 268 31.0
C09p49100 Brassica napus HOM05D003168 ORTHO05D003590 3.0e-20 104.4 271 31.7
Gohir.A08G083200 Gossypium hirsutum HOM05D003168 ORTHO05D003590 3.0e-20 104.4 291 29.6
RcHm_v2.0_Chr4g0399831 Rosa chinensis HOM05D003168 ORTHO05D003590 3.0e-20 104.4 325 31.1
Gohir.A03G021400 Gossypium hirsutum HOM05D003168 ORTHO05D003590 4.0e-20 104.0 285 31.2
Lj6g0018522 Lotus japonicus HOM05D003168 ORTHO05D003590 4.0e-20 104.0 287 30.3
PGR044G0796 Punica granatum HOM05D003168 ORTHO05D003590 4.0e-20 104.0 257 32.3
Cpa.g.sc95.18 Carica papaya HOM05D003168 ORTHO05D003590 5.2e-20 103.6 271 30.6
Gorai.004G098300 Gossypium raimondii HOM05D003168 ORTHO05D003590 5.2e-20 103.6 291 29.9
Eucgr.B01130 Eucalyptus grandis HOM05D003168 ORTHO05D003590 6.8e-20 103.2 270 33.3
Lalb_Chr08g0231871 Lupinus albus HOM05D003168 ORTHO05D003590 6.8e-20 103.2 289 29.8
TPR.G5415 Trifolium pratense HOM05D003168 ORTHO05D003590 6.8e-20 103.2 286 30.8
MSTRG.26538 Avicennia marina HOM05D003168 ORTHO05D003590 8.8e-20 102.8 255 31.8
Psat0ss2585g0600 Pisum sativum HOM05D003168 ORTHO05D003590 8.8e-20 102.8 262 32.1
Ciclev10008645m.g Citrus clementina HOM05D003168 ORTHO05D003590 1.2e-19 102.4 261 30.7
CANSAT11G0244 Cannabis sativa HOM05D003168 ORTHO05D003590 1.5e-19 102.1 256 33.6
Migut.L01890 Erythranthe guttata HOM05D003168 ORTHO05D003590 1.5e-19 102.1 274 30.7
Lsat_1_v5_gn_5_82861 Lactuca sativa HOM05D003168 ORTHO05D003590 1.5e-19 102.1 260 30.8
Glyma.17G060100 Glycine max HOM05D003168 ORTHO05D003590 2.0e-19 101.7 283 29.0
Atru.chr7.796 Acer truncatum HOM05D003168 ORTHO05D003590 2.6e-19 101.3 288 29.9
Eucgr.C02223 Eucalyptus grandis HOM05D003168 ORTHO05D003590 2.6e-19 101.3 258 33.3
A10p14690 Brassica napus HOM05D003168 ORTHO05D003590 3.4e-19 100.9 269 32.3
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 3.4e-19 100.9 287 30.3
Aa31LG3G250 Aethionema arabicum HOM05D003168 ORTHO05D003590 4.4e-19 100.5 271 31.7
Gohir.D08G092800 Gossypium hirsutum HOM05D003168 ORTHO05D003590 5.7e-19 100.1 291 29.2
Ca_21250_v3 Cicer arietinum L. HOM05D003168 ORTHO05D003525 7.5e-19 99.8 261 30.3
ECA234G0668 Erigeron canadensis HOM05D003168 ORTHO05D003590 7.5e-19 99.8 270 30.4
Medtr2g037790 Medicago truncatula HOM05D003168 ORTHO05D003590 7.5e-19 99.8 261 31.8
BcaNung04101 Brassica carinata HOM05D003168 ORTHO05D003590 9.8e-19 99.4 268 31.3
Glyma.09G058900 Glycine max HOM05D003168 ORTHO05D003590 9.8e-19 99.4 256 30.9
TPR.G5366 Trifolium pratense HOM05D003168 ORTHO05D003590 9.8e-19 99.4 257 30.7
COL.COLO4_34242 Corchorus olitorius HOM05D003168 ORTHO05D003590 1.3e-18 99.0 284 29.2
VMungo1309G2777 Vigna mungo HOM05D003168 ORTHO05D003590 1.3e-18 99.0 260 29.6
Lj5C662G0 Lonicera japonica HOM05D003168 ORTHO05D003590 1.7e-18 98.6 281 30.2
C01p21450 Brassica napus HOM05D003168 ORTHO05D003590 2.2e-18 98.2 268 31.0
BolC1t02064H Brassica oleracea HOM05D003168 ORTHO05D003590 2.2e-18 98.2 268 31.0
THA.LOC104813510 Tarenaya hassleriana HOM05D003168 ORTHO05D003590 2.2e-18 98.2 263 31.2
Thecc.09G184500 Theobroma cacao HOM05D003168 ORTHO05D003590 2.2e-18 98.2 284 27.5
CsaV3_1G031820 Cucumis sativus L. HOM05D003168 ORTHO05D003590 2.8e-18 97.8 286 30.4
Psat0ss2585g0640 Pisum sativum HOM05D003168 ORTHO05D003590 2.8e-18 97.8 257 29.6
Sed0017714 Sechium edule HOM05D003168 ORTHO05D003590 2.8e-18 97.8 294 29.6
MELO3C017434.2 Cucumis melo HOM05D003168 ORTHO05D003590 3.7e-18 97.4 267 31.5
Dinv41167 Davidia involucrata HOM05D003168 ORTHO05D003590 3.7e-18 97.4 261 31.4
Manes.06G020500 Manihot esculenta HOM05D003168 ORTHO05D003590 3.7e-18 97.4 256 30.9
arahy.Tifrunner.gnm1.ann1.XZH3XT Arachis hypogaea HOM05D003168 ORTHO05D003590 4.8e-18 97.1 324 26.5
Carub.0007s1509 Capsella rubella HOM05D003168 ORTHO05D003590 4.8e-18 97.1 268 30.6
CiPaw.07G196200 Carya illinoinensis HOM05D003168 ORTHO05D003590 4.8e-18 97.1 284 29.9
Hma1.2p1_0022F.1_g014560 Hydrangea macrophylla HOM05D003168 ORTHO05D003590 4.8e-18 97.1 289 30.4
Hund09055 Selenicereus undatus HOM05D003168 ORTHO05D003590 4.8e-18 97.1 259 30.1
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.8e-18 97.1 256 29.7
THA.LOC104811778 Tarenaya hassleriana HOM05D003168 ORTHO05D003590 4.8e-18 97.1 256 29.7
Peaxi162Scf00915g00036 Petunia axillaris HOM05D003168 ORTHO05D003590 6.3e-18 96.7 284 30.3
QL02p047700 Quercus lobata HOM05D003168 ORTHO05D003590 6.3e-18 96.7 277 29.6
CSS0019142 Camellia sinensis var. sinensis HOM05D003168 ORTHO05D003590 8.3e-18 96.3 300 30.0
Glyma.15G165000 Glycine max HOM05D003168 ORTHO05D003590 8.3e-18 96.3 260 30.8
Phvul.003G142000 Phaseolus vulgaris HOM05D003168 ORTHO05D003590 8.3e-18 96.3 288 29.2
Hma1.2p1_1326F.1_g275765 Hydrangea macrophylla HOM05D003168 ORTHO05D003590 1.1e-17 95.9 262 32.1
Peaxi162Scf00915g00035 Petunia axillaris HOM05D003168 ORTHO05D003590 1.1e-17 95.9 284 30.6
Psat1g144600 Pisum sativum HOM05D003168 ORTHO05D003590 1.1e-17 95.9 299 26.8
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.1e-17 95.9 255 29.0
TAR383G0299 Trochodendron aralioides HOM05D003168 ORTHO05D003590 1.1e-17 95.9 264 30.3
AL7G27160 Arabidopsis lyrata HOM05D003168 ORTHO05D003590 1.4e-17 95.5 266 29.7
Thhalv10027226m.g Eutrema salsugineum HOM05D003168 ORTHO05D003590 1.4e-17 95.5 266 28.6
Nitab4.5_0000366g0140 Nicotiana tabacum HOM05D003168 ORTHO05D003590 1.4e-17 95.5 256 30.5
Psat1g144720 Pisum sativum HOM05D003168 ORTHO05D003590 1.4e-17 95.5 260 31.9
TPR.G30785 Trifolium pratense HOM05D003168 ORTHO05D003590 1.4e-17 95.5 290 27.6
BcaC09g50736 Brassica carinata HOM05D003168 ORTHO05D003590 1.8e-17 95.1 268 30.2
Solyc07g008920.4 Solanum lycopersicum HOM05D003168 ORTHO05D003590 1.8e-17 95.1 256 29.3
vmacro20824 Vaccinium macrocarpon HOM05D003168 ORTHO05D003590 2.4e-17 94.7 299 29.4
AL7G27170 Arabidopsis lyrata HOM05D003168 ORTHO05D003590 3.1e-17 94.4 268 29.9
Medtr4g127490 Medicago truncatula HOM05D003168 ORTHO05D003590 3.1e-17 94.4 257 29.6
Ca_02094_v3 Cicer arietinum L. HOM05D003168 ORTHO05D003590 4.1e-17 94.0 258 29.8
Ca_02085_v3 Cicer arietinum L. HOM05D003168 ORTHO05D003590 5.4e-17 93.6 270 28.5
Ca_02090_v3 Cicer arietinum L. HOM05D003168 ORTHO05D003590 5.4e-17 93.6 270 28.5
Duzib150G0134 Durio zibethinus HOM05D003168 ORTHO05D003590 5.4e-17 93.6 286 29.4
SEGI_29104 Sequoiadendron giganteum HOM05D003168 ORTHO05D003590 5.4e-17 93.6 289 26.6
Phvul.003G142100 Phaseolus vulgaris HOM05D003168 ORTHO05D003590 7.0e-17 93.2 284 28.2
Rhsim01G0118700 Rhododendron simsii HOM05D003168 ORTHO05D003590 7.0e-17 93.2 298 28.5
AT4G25860 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 9.1e-17 92.8 268 31.3
Potri.006G076400 Populus trichocarpa HOM05D003168 ORTHO05D003590 9.1e-17 92.8 255 29.8
Potri.018G143600 Populus trichocarpa HOM05D003168 ORTHO05D003590 9.1e-17 92.8 255 29.4
Sp7g23880 Schrenkiella parvula HOM05D003168 ORTHO05D003590 9.1e-17 92.8 269 27.9
VMungo1215G0632 Vigna mungo HOM05D003168 ORTHO05D003590 9.1e-17 92.8 257 29.2
BcaC09g50737 Brassica carinata HOM05D003168 ORTHO05D003590 1.2e-16 92.4 268 28.4
Glyma.17G060000 Glycine max HOM05D003168 ORTHO05D003590 1.2e-16 92.4 284 27.8
Phvul.009G236900 Phaseolus vulgaris HOM05D003168 ORTHO05D003590 1.2e-16 92.4 257 29.2
ClCG06G013550 Citrullus lanatus HOM05D003168 ORTHO05D003590 1.6e-16 92.0 284 29.6
Sabra06G0057300 Salix brachista HOM05D003168 ORTHO05D003590 1.6e-16 92.0 293 28.0
Dinv25431 Davidia involucrata HOM05D003168 ORTHO05D003590 2.0e-16 91.7 262 30.2
Lalb_Chr13g0300061 Lupinus albus HOM05D003168 ORTHO05D003590 2.0e-16 91.7 260 27.7
Medtr2g037770 Medicago truncatula HOM05D003168 ORTHO05D003590 2.7e-16 91.3 270 27.8
PSO144G0076 Papaver somniferum HOM05D003168 ORTHO05D003590 2.7e-16 91.3 287 28.6
PGSC0003DMG400028739 Solanum tuberosum HOM05D003168 ORTHO05D003590 2.7e-16 91.3 257 30.0
CBR_g31882 Chara braunii HOM05D003168 ORTHO05D003590 3.5e-16 90.9 245 31.4
Sed0027540 Sechium edule HOM05D003168 ORTHO05D003590 3.5e-16 90.9 286 29.0
AT4G25850 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 4.5e-16 90.5 268 30.6
CsaV3_2G008670 Cucumis sativus L. HOM05D003168 ORTHO05D003590 5.9e-16 90.1 262 30.5
HanXRQChr10g0308811 Helianthus annuus HOM05D003168 ORTHO05D003590 5.9e-16 90.1 275 29.5
TWI34G0203 Tripterygium wilfordii HOM05D003168 ORTHO05D003590 5.9e-16 90.1 288 27.8
Glyma.15G164900 Glycine max HOM05D003168 ORTHO05D003590 1.3e-15 89.0 271 28.8
TPR.G30788 Trifolium pratense HOM05D003168 ORTHO05D003590 1.3e-15 89.0 284 28.2
VMungo1215G1022 Vigna mungo HOM05D003168 ORTHO05D003590 1.3e-15 89.0 246 30.1
HanXRQChr12g0358511 Helianthus annuus HOM05D003168 ORTHO05D003590 1.7e-15 88.6 259 29.7
MELO3C003982.2 Cucumis melo HOM05D003168 ORTHO05D003590 2.3e-15 88.2 262 30.5
DCAR_019819 Daucus carota HOM05D003168 ORTHO05D003590 2.3e-15 88.2 286 27.3
Glyma.09G058800 Glycine max HOM05D003168 ORTHO05D003590 2.3e-15 88.2 273 28.2
Sed0011233 Sechium edule HOM05D003168 ORTHO05D003590 2.3e-15 88.2 260 30.8
BraA01t01667Z Brassica rapa HOM05D003168 ORTHO05D003590 2.9e-15 87.8 268 29.9
CAN.G547.24 Capsicum annuum HOM05D003168 ORTHO05D003590 3.8e-15 87.4 256 29.7
ClCG11G011820 Citrullus lanatus HOM05D003168 ORTHO05D003590 5.0e-15 87.0 264 31.4
Lalb_Chr23g0276831 Lupinus albus HOM05D003168 ORTHO05D003590 5.0e-15 87.0 302 26.2
Nn8g40875 Nelumbo nucifera HOM05D003168 ORTHO05D003590 5.0e-15 87.0 255 28.6
A01p17120 Brassica napus HOM05D003168 ORTHO05D003590 1.1e-14 85.9 268 29.5
BcaNung04102 Brassica carinata HOM05D003168 ORTHO05D003590 1.5e-14 85.5 266 27.4
HPP92_010284 Vanilla planifolia HOM05D003168 ORTHO05D003590 2.5e-14 84.7 267 30.0
Phvul.003G141900 Phaseolus vulgaris HOM05D003168 ORTHO05D003590 3.3e-14 84.3 264 27.3
Glyma.17G059900 Glycine max HOM05D003168 ORTHO05D003590 7.2e-14 83.2 264 28.8
Lj4g0011458 Lotus japonicus HOM05D003168 ORTHO05D003590 1.2e-13 82.4 275 26.5
Glyma.13G100000 Glycine max HOM05D003168 ORTHO05D003590 1.6e-13 82.0 262 27.9
Migut.O00830 Erythranthe guttata HOM05D003168 ORTHO05D003590 1.0e-12 79.3 218 29.8
Hma1.2p1_0314F.1_g121740 Hydrangea macrophylla HOM05D003168 ORTHO05D003590 3.0e-12 77.8 230 30.4
Lalb_Chr12g0199571 Lupinus albus HOM05D003168 ORTHO05D003590 1.2e-11 75.9 271 25.5
EL10Ac8g18328 Beta vulgaris HOM05D003168 ORTHO05D003590 2.0e-11 75.1 282 25.9
Haze_22009 Corylus avellana HOM05D003168 ORTHO05D003590 7.5e-11 73.2 162 32.1
PSO170G6242 Papaver somniferum HOM05D003168 ORTHO05D003590 1.3e-10 72.4 169 30.2
AUR62021342 Chenopodium quinoa HOM05D003168 ORTHO05D003590 1.1e-09 69.3 259 27.8
Ah.09g230100 Amaranthus hybridus HOM05D003168 ORTHO05D003590 3.2e-09 67.8 332 23.8
Nitab4.5_0002365g0020 Nicotiana tabacum HOM05D003168 ORTHO05D003590 9.2e-09 66.2 201 29.9
Peaxi162Scf00324g00023 Petunia axillaris HOM05D003168 ORTHO05D003590 1.6e-08 65.5 193 30.6
Lalb_Chr08g0231761 Lupinus albus HOM05D003168 ORTHO05D003590 2.7e-08 64.7 209 28.2
MCO03G557 Micromonas commoda HOM05D003168 ORTHO05D003590 4.5e-08 63.9 269 26.4
MBI13_g31532_MAGBIO Magnolia biondii HOM05D003168 ORTHO05D003590 7.8e-08 63.2 145 32.4
CANSAT11G0120 Cannabis sativa HOM05D003168 ORTHO05D003590 1.0e-07 62.8 192 28.6
CBR_g8295 Chara braunii HOM05D000933 ORTHO05D017298 1.7e-07 62.0 72 47.2
AUR62021343 Chenopodium quinoa HOM05D003168 ORTHO05D003590 8.6e-07 59.7 150 32.7
AUR62033257 Chenopodium quinoa HOM05D003168 ORTHO05D003590 1.5e-06 58.9 121 35.5
Mapoly0187s0011 Marchantia polymorpha HOM05D000933 ORTHO05D017298 5.6e-06 57.0 299 24.4
ECA240G2865 Erigeron canadensis HOM05D000758 ORTHO05D002867 7.3e-06 56.6 72 41.7


User provided reference genes

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