Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G277 Micromonas commoda HOM05D048100 ORTHO05D044250 0.0e+00 1142.1 574 100.0
Cre13.g567300 Chlamydomonas reinhardtii HOM05D048100 ORTHO05D044250 5.0e-92 342.8 766 33.7
Sabra15G0117900 Salix brachista HOM05D002723 ORTHO05D003240 7.4e-19 99.8 591 25.0
Potri.015G097200 Populus trichocarpa HOM05D002723 ORTHO05D003240 1.3e-18 99.0 600 25.2
Dinv11176 Davidia involucrata HOM05D002723 ORTHO05D003240 3.7e-18 97.4 598 25.4
Dinv23153 Davidia involucrata HOM05D002723 ORTHO05D003240 3.7e-18 97.4 599 24.7
FAN10G3895 Fragaria x ananassa HOM05D002723 ORTHO05D003240 3.7e-18 97.4 610 26.2
CANSAT80G2425 Cannabis sativa HOM05D002723 ORTHO05D003240 4.8e-18 97.1 591 24.0
MD06G1028700 Malus domestica HOM05D002723 ORTHO05D003240 1.1e-17 95.9 607 26.0
Potri.012G098300 Populus trichocarpa HOM05D002723 ORTHO05D003240 1.1e-17 95.9 594 25.1
Lsat_1_v5_gn_4_80820 Lactuca sativa HOM05D002723 ORTHO05D003240 2.4e-17 94.7 601 24.8
Ah.11g045440 Amaranthus hybridus HOM05D002723 ORTHO05D003240 5.3e-17 93.6 603 24.9
Carub.0005s1475 Capsella rubella HOM05D002723 ORTHO05D003240 5.3e-17 93.6 605 25.0
FAN01G2771 Fragaria x ananassa HOM05D002723 ORTHO05D003240 5.3e-17 93.6 610 26.1
Ca_00309_v3 Cicer arietinum L. HOM05D002723 ORTHO05D003240 7.0e-17 93.2 596 24.7
Ca_00314_v3 Cicer arietinum L. HOM05D002723 ORTHO05D003240 7.0e-17 93.2 596 24.7
FvH4_7g06770 Fragaria vesca HOM05D002723 ORTHO05D003240 7.0e-17 93.2 611 26.0
FAN06G1916 Fragaria x ananassa HOM05D002723 ORTHO05D003240 7.0e-17 93.2 611 26.0
Actinidia25568 Actinidia chinensis HOM05D002723 ORTHO05D003240 9.1e-17 92.8 591 24.4
FAN03G1565 Fragaria x ananassa HOM05D002723 ORTHO05D003240 9.1e-17 92.8 610 25.9
Sabra12G0071700 Salix brachista HOM05D002723 ORTHO05D003240 9.1e-17 92.8 594 24.7
Haze_07132 Corylus avellana HOM05D002723 ORTHO05D003240 1.6e-16 92.0 601 24.5
BcaB05g23006 Brassica carinata HOM05D002723 ORTHO05D003240 2.0e-16 91.7 602 24.8
Ciclev10030907m.g Citrus clementina HOM05D002723 ORTHO05D003240 2.0e-16 91.7 594 25.1
Dinv02539 Davidia involucrata HOM05D002723 ORTHO05D003240 2.0e-16 91.7 594 24.7
Prupe.5G043100 Prunus persica HOM05D002723 ORTHO05D003240 2.6e-16 91.3 608 24.5
Cpa.g.sc13.109 Carica papaya HOM05D002723 ORTHO05D003240 3.5e-16 90.9 588 24.1
Eucgr.K02720 Eucalyptus grandis HOM05D002723 ORTHO05D003240 3.5e-16 90.9 598 25.4
Sc22g0003800 Simmondsia chinensis HOM05D002723 ORTHO05D003240 3.5e-16 90.9 601 24.1
THA.LOC104821520 Tarenaya hassleriana HOM05D002723 ORTHO05D003240 3.5e-16 90.9 593 24.8
A01p25340 Brassica napus HOM05D002723 ORTHO05D003240 4.5e-16 90.5 601 24.8
Rhsim08G0190500 Rhododendron simsii HOM05D002723 ORTHO05D003240 4.5e-16 90.5 591 24.0
CiPaw.11G006500 Carya illinoinensis HOM05D002723 ORTHO05D003240 5.9e-16 90.1 609 25.3
ECA232G1339 Erigeron canadensis HOM05D002723 ORTHO05D003240 5.9e-16 90.1 600 25.2
Migut.D01268 Erythranthe guttata HOM05D002723 ORTHO05D003240 5.9e-16 90.1 592 24.8
QL10p002843 Quercus lobata HOM05D002723 ORTHO05D003240 5.9e-16 90.1 601 24.3
THA.LOC104818184 Tarenaya hassleriana HOM05D002723 ORTHO05D003240 5.9e-16 90.1 587 24.4
Cfa018790 Carpinus fangiana HOM05D002723 ORTHO05D003240 7.7e-16 89.7 604 24.5
Duzib212G0411 Durio zibethinus HOM05D002723 ORTHO05D003240 7.7e-16 89.7 603 24.9
Hma1.2p1_0014F.1_g009360 Hydrangea macrophylla HOM05D002723 ORTHO05D003240 7.7e-16 89.7 592 24.2
MBI16_g26408_MAGBIO Magnolia biondii HOM05D002723 ORTHO05D003240 7.7e-16 89.7 613 24.8
PGR083G1230 Punica granatum HOM05D002723 ORTHO05D003240 7.7e-16 89.7 617 24.3
Thhalv10010177m.g Eutrema salsugineum HOM05D002723 ORTHO05D003240 1.0e-15 89.4 605 25.0
PSO478G0593 Papaver somniferum HOM05D002723 ORTHO05D003240 1.0e-15 89.4 598 24.4
VMungo1309G1476 Vigna mungo HOM05D002723 ORTHO05D003240 1.0e-15 89.4 613 25.0
BraA01t02444Z Brassica rapa HOM05D002723 ORTHO05D003240 1.3e-15 89.0 602 24.6
Haze_07133 Corylus avellana HOM05D002723 ORTHO05D003240 1.3e-15 89.0 601 24.5
Ca_29261_v3 Cicer arietinum L. HOM05D002723 ORTHO05D003240 1.7e-15 88.6 558 26.0
Medtr2g013120 Medicago truncatula HOM05D002723 ORTHO05D003240 1.7e-15 88.6 615 24.6
AT3G48560 Arabidopsis thaliana HOM05D002723 ORTHO05D003240 2.2e-15 88.2 604 24.2
C01p32280 Brassica napus HOM05D002723 ORTHO05D003240 2.2e-15 88.2 602 24.3
BolC1t03114H Brassica oleracea HOM05D002723 ORTHO05D003240 2.2e-15 88.2 602 24.3
PGSC0003DMG400034102 Solanum tuberosum HOM05D002723 ORTHO05D003240 2.2e-15 88.2 598 24.7
BcaC09g49880 Brassica carinata HOM05D002723 ORTHO05D003240 2.9e-15 87.8 602 24.3
AUR62034831 Chenopodium quinoa HOM05D002723 ORTHO05D003240 3.8e-15 87.4 611 24.7
Aa31LG4G17180 Aethionema arabicum HOM05D002723 ORTHO05D003240 5.0e-15 87.0 589 24.3
Eucgr.B00108 Eucalyptus grandis HOM05D002723 ORTHO05D003240 5.0e-15 87.0 592 24.3
Nitab4.5_0010961g0010 Nicotiana tabacum HOM05D002723 ORTHO05D003240 5.0e-15 87.0 591 23.0
Aqoxy3G00597 Aquilegia oxysepala HOM05D002723 ORTHO05D003240 6.5e-15 86.7 600 24.0
AL5G28010 Arabidopsis lyrata HOM05D002723 ORTHO05D003240 6.5e-15 86.7 604 24.2
Lj1g0017329 Lotus japonicus HOM05D002723 ORTHO05D003240 6.5e-15 86.7 603 23.7
Lj6g0017314 Lotus japonicus HOM05D002723 ORTHO05D003240 6.5e-15 86.7 593 24.3
Medtr3g099190 Medicago truncatula HOM05D002723 ORTHO05D003240 6.5e-15 86.7 598 22.9
Thecc.04G176500 Theobroma cacao HOM05D002723 ORTHO05D003240 6.5e-15 86.7 592 24.5
EL10Ac5g11406 Beta vulgaris HOM05D002723 ORTHO05D003240 8.5e-15 86.3 600 24.2
Glyma.04G196100 Glycine max HOM05D002723 ORTHO05D003240 8.5e-15 86.3 595 25.2
Glyma.13G241000 Glycine max HOM05D002723 ORTHO05D003240 8.5e-15 86.3 598 24.4
QL10p002814 Quercus lobata HOM05D002723 ORTHO05D003240 8.5e-15 86.3 596 24.3
Sopen03g008440 Solanum pennellii HOM05D002723 ORTHO05D003240 8.5e-15 86.3 599 24.5
Sopen07g030210 Solanum pennellii HOM05D002723 ORTHO05D003240 8.5e-15 86.3 599 24.4
Nitab4.5_0011199g0020 Nicotiana tabacum HOM05D002723 ORTHO05D003240 1.1e-14 85.9 591 23.0
Prupe.8G001300 Prunus persica HOM05D002723 ORTHO05D003240 1.1e-14 85.9 602 24.4
Solyc03g044330.1 Solanum lycopersicum HOM05D002723 ORTHO05D003240 1.1e-14 85.9 599 24.4
PGSC0003DMG400007078 Solanum tuberosum HOM05D002723 ORTHO05D003240 1.1e-14 85.9 599 24.4
CAN.G46.9 Capsicum annuum HOM05D002723 ORTHO05D003240 1.5e-14 85.5 595 24.2
Cc10_g00510 Coffea canephora HOM05D002723 ORTHO05D003240 1.5e-14 85.5 589 24.4
Migut.I00533 Erythranthe guttata HOM05D002723 ORTHO05D003240 1.5e-14 85.5 604 24.0
Manes.06G120100 Manihot esculenta HOM05D002723 ORTHO05D003240 1.5e-14 85.5 611 25.0
PSO017G3090 Papaver somniferum HOM05D002723 ORTHO05D003240 1.5e-14 85.5 591 24.9
MBI07_g39450_MAGBIO Magnolia biondii HOM05D002723 ORTHO05D003240 1.9e-14 85.1 589 24.8
DCAR_007493 Daucus carota HOM05D002723 ORTHO05D003240 2.5e-14 84.7 596 23.7
SHI14331 Sapria himalayana HOM05D002723 ORTHO05D003240 2.5e-14 84.7 591 23.4
MSTRG.11276 Avicennia marina HOM05D002723 ORTHO05D003240 3.2e-14 84.3 600 25.2
CSS0023817 Camellia sinensis var. sinensis HOM05D002723 ORTHO05D003240 4.2e-14 84.0 591 23.4
CSS0024943 Camellia sinensis var. sinensis HOM05D002723 ORTHO05D003240 4.2e-14 84.0 591 23.4
DCAR_021621 Daucus carota HOM05D002723 ORTHO05D003240 4.2e-14 84.0 611 23.9
Duzib175G0008 Durio zibethinus HOM05D002723 ORTHO05D003240 4.2e-14 84.0 602 24.6
Lalb_Chr20g0121961 Lupinus albus HOM05D002723 ORTHO05D003240 4.2e-14 84.0 594 23.6
Nitab4.5_0001530g0160 Nicotiana tabacum HOM05D002723 ORTHO05D003240 4.2e-14 84.0 598 23.9
TAR371G0575 Trochodendron aralioides HOM05D002723 ORTHO05D003240 4.2e-14 84.0 602 24.6
AUR62029606 Chenopodium quinoa HOM05D002723 ORTHO05D003240 7.2e-14 83.2 606 23.8
ClCG06G017910 Citrullus lanatus HOM05D002723 ORTHO05D003240 7.2e-14 83.2 588 24.3
Sp5g13420 Schrenkiella parvula HOM05D002723 ORTHO05D003240 7.2e-14 83.2 602 23.9
SGA_v2.0_scaffold649G53352 Striga asiatica HOM05D002723 ORTHO05D003240 7.2e-14 83.2 597 24.0
Peaxi162Scf00377g00074 Petunia axillaris HOM05D002723 ORTHO05D003240 9.4e-14 82.8 604 24.2
Duzib268G0783 Durio zibethinus HOM05D002723 ORTHO05D003240 1.2e-13 82.4 599 23.4
MD10G1013700 Malus domestica HOM05D002723 ORTHO05D003240 1.2e-13 82.4 609 24.1
SGA_v2.0_scaffold215G42341 Striga asiatica HOM05D002723 ORTHO05D003240 1.2e-13 82.4 597 24.0
Gohir.A10G138800 Gossypium hirsutum HOM05D002723 ORTHO05D003240 1.6e-13 82.0 594 24.1
Os04g0389800 Oryza sativa ssp. japonica HOM05D002723 ORTHO05D003240 1.6e-13 82.0 603 25.5
CsaV3_1G000560 Cucumis sativus L. HOM05D002723 ORTHO05D003240 2.1e-13 81.6 593 23.9
VMungo0540G1422 Vigna mungo HOM05D002723 ORTHO05D003240 2.1e-13 81.6 596 23.5
Sed0017429 Sechium edule HOM05D002723 ORTHO05D003240 2.7e-13 81.3 588 24.5
Aqoxy5G00561 Aquilegia oxysepala HOM05D002723 ORTHO05D003240 3.6e-13 80.9 593 23.4
Peaxi162Scf00591g00413 Petunia axillaris HOM05D002723 ORTHO05D003240 3.6e-13 80.9 585 23.1
Oeu005003.1 Olea europaea HOM05D002723 ORTHO05D003240 4.7e-13 80.5 605 24.6
Ca_16049_v3 Cicer arietinum L. HOM05D002723 ORTHO05D003240 6.1e-13 80.1 614 24.8
Nn1g08711 Nelumbo nucifera HOM05D002723 ORTHO05D003240 6.1e-13 80.1 533 24.4
Solyc06g059880.3 Solanum lycopersicum HOM05D002723 ORTHO05D003240 6.1e-13 80.1 602 23.3
Glyma.06G169700 Glycine max HOM05D002723 ORTHO05D003240 8.0e-13 79.7 603 25.0
Gohir.D02G013100 Gossypium hirsutum HOM05D002723 ORTHO05D003240 8.0e-13 79.7 602 24.4
Gorai.005G016600 Gossypium raimondii HOM05D002723 ORTHO05D003240 8.0e-13 79.7 602 24.4
Phvul.009G166100 Phaseolus vulgaris HOM05D002723 ORTHO05D003240 8.0e-13 79.7 614 24.3
Psat5g051480 Pisum sativum HOM05D002723 ORTHO05D003240 8.0e-13 79.7 586 22.5
Sed0003955 Sechium edule HOM05D002723 ORTHO05D003240 8.0e-13 79.7 588 24.0
ATR0561G089 Amborella trichopoda HOM05D002723 ORTHO05D003240 1.0e-12 79.3 604 23.0
Medtr2g027220 Medicago truncatula HOM05D002723 ORTHO05D003240 1.0e-12 79.3 592 22.3
Phvul.006G187400 Phaseolus vulgaris HOM05D002723 ORTHO05D003240 1.0e-12 79.3 596 23.2
TAR629G0881 Trochodendron aralioides HOM05D002723 ORTHO05D003240 1.0e-12 79.3 594 24.2
Glyma.15G072500 Glycine max HOM05D002723 ORTHO05D003240 1.4e-12 79.0 596 23.8
Actinidia36724 Actinidia chinensis HOM05D002723 ORTHO05D003240 1.8e-12 78.6 587 23.3
AagrBONN_evm.TU.Sc2ySwM_344.1740 Anthoceros agrestis HOM05D002723 ORTHO05D003240 1.8e-12 78.6 571 23.5
Gohir.A02G012300 Gossypium hirsutum HOM05D002723 ORTHO05D003240 1.8e-12 78.6 602 24.4
TWI56G0015 Tripterygium wilfordii HOM05D002723 ORTHO05D003240 1.8e-12 78.6 607 24.4
MELO3C026205.2 Cucumis melo HOM05D002723 ORTHO05D003240 3.0e-12 77.8 588 23.8
arahy.Tifrunner.gnm1.ann1.881M8L Arachis hypogaea HOM05D002723 ORTHO05D003240 4.0e-12 77.4 608 23.8
HanXRQChr02g0034691 Helianthus annuus HOM05D002723 ORTHO05D003240 4.0e-12 77.4 599 23.9
arahy.Tifrunner.gnm1.ann1.KGMC0X Arachis hypogaea HOM05D002723 ORTHO05D003240 5.2e-12 77.0 596 23.7
TWI12G0787 Tripterygium wilfordii HOM05D002723 ORTHO05D003240 6.7e-12 76.6 611 24.1
unitig_26.g9287 Utricularia gibba HOM05D002723 ORTHO05D003240 6.7e-12 76.6 583 23.5
SMO298G0030 Selaginella moellendorffii HOM05D002723 ORTHO05D003240 8.8e-12 76.3 594 23.2
HPP92_001832 Vanilla planifolia HOM05D002723 ORTHO05D003240 8.8e-12 76.3 585 23.4
Gorai.011G141100 Gossypium raimondii HOM05D002723 ORTHO05D003240 1.5e-11 75.5 591 23.5
HanXRQChr09g0273191 Helianthus annuus HOM05D002723 ORTHO05D003240 2.0e-11 75.1 603 24.9
PRCOL_00003526 Prasinoderma coloniale HOM05D002723 ORTHO05D003240 2.0e-11 75.1 580 22.4
Solyc07g061940.4 Solanum lycopersicum HOM05D002723 ORTHO05D003240 2.0e-11 75.1 577 24.3
Gohir.D10G128000 Gossypium hirsutum HOM05D002723 ORTHO05D003240 2.6e-11 74.7 591 23.2
Oeu018541.1 Olea europaea HOM05D002723 ORTHO05D003240 4.4e-11 73.9 599 23.4
Nn5g28177 Nelumbo nucifera HOM05D002723 ORTHO05D003240 5.7e-11 73.6 522 23.8
PGSC0003DMG400013027 Solanum tuberosum HOM05D002723 ORTHO05D003240 5.7e-11 73.6 593 22.9
Pp3c10_21800 Physcomitrium patens HOM05D002723 ORTHO05D003240 9.7e-11 72.8 590 23.2
CBR_g18887 Chara braunii HOM05D002723 ORTHO05D003240 1.3e-10 72.4 593 23.6
MCO08G154 Micromonas commoda HOM05D002723 ORTHO05D003240 1.3e-10 72.4 599 23.7
TPR.G14204 Trifolium pratense HOM05D002723 ORTHO05D003240 1.3e-10 72.4 607 22.7
Ciclev10007130m.g Citrus clementina HOM05D002723 ORTHO05D003240 1.7e-10 72.0 589 23.4
A05p03300 Brassica napus HOM05D002723 ORTHO05D003240 2.2e-10 71.6 612 24.8
BraA05t19319Z Brassica rapa HOM05D002723 ORTHO05D003240 2.2e-10 71.6 612 24.8
Manes.15G161400 Manihot esculenta HOM05D002723 ORTHO05D003240 2.8e-10 71.2 600 22.8
Mapoly0088s0092 Marchantia polymorpha HOM05D002723 ORTHO05D003240 4.8e-10 70.5 585 23.2
CARHR157360 Cardamine hirsuta HOM05D002723 ORTHO05D003240 8.2e-10 69.7 602 24.4
Zm00001eb241810 Zea mays HOM05D002723 ORTHO05D003240 1.8e-09 68.6 586 22.7
Gohir.D02G013000 Gossypium hirsutum HOM05D002723 ORTHO05D003240 5.3e-09 67.0 607 23.2
SMO118G0217 Selaginella moellendorffii HOM05D002723 ORTHO05D003240 9.1e-09 66.2 145 31.7
TWI32G0594 Tripterygium wilfordii HOM05D002723 ORTHO05D003240 9.1e-09 66.2 582 23.0
Zm00001eb180890 Zea mays HOM05D002723 ORTHO05D003240 1.2e-08 65.9 594 22.4
HPP92_004961 Vanilla planifolia HOM05D002723 ORTHO05D003240 2.0e-08 65.1 598 22.6
SEGI_17803 Sequoiadendron giganteum HOM05D002723 ORTHO05D003240 3.5e-08 64.3 602 22.1
Os02g0510200 Oryza sativa ssp. japonica HOM05D002723 ORTHO05D003240 4.5e-08 63.9 587 22.8
Gorai.005G016500 Gossypium raimondii HOM05D002723 ORTHO05D003240 1.7e-07 62.0 585 22.7
HPP92_000885 Vanilla planifolia HOM05D002723 ORTHO05D003240 6.5e-07 60.1 530 24.0
CDE08G0856 Ceratophyllum demersum HOM05D002723 ORTHO05D003240 1.1e-06 59.3 548 22.3
Cfa026079 Carpinus fangiana HOM05D002723 ORTHO05D003240 1.5e-06 58.9 586 21.0
Eucgr.B00110 Eucalyptus grandis HOM05D002723 ORTHO05D003240 2.5e-06 58.2 235 25.1
Cfa026087 Carpinus fangiana HOM05D002723 ORTHO05D003240 3.2e-06 57.8 586 23.4
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 3.2e-06 57.8 590 23.6
CBR_g42125 Chara braunii HOM05D002723 ORTHO05D003240 3.2e-06 57.8 143 28.7
vmacro19196 Vaccinium macrocarpon HOM05D002723 ORTHO05D003240 3.2e-06 57.8 128 32.0
GSVIVG01033088001 Vitis vinifera HOM05D002723 ORTHO05D003240 3.2e-06 57.8 136 30.9
AUR62003521 Chenopodium quinoa HOM05D002723 ORTHO05D003240 4.2e-06 57.4 139 29.5
CBR_g8110 Chara braunii HOM05D002723 ORTHO05D003240 5.5e-06 57.0 143 28.7
TPR.G36762 Trifolium pratense HOM05D002723 ORTHO05D003240 5.5e-06 57.0 541 22.2
CBR_g8113 Chara braunii HOM05D002723 ORTHO05D003240 7.2e-06 56.6 143 28.0
Thhalv10011030m.g Eutrema salsugineum HOM05D002723 ORTHO05D003240 7.2e-06 56.6 133 31.6
Manes.17G007500 Manihot esculenta HOM05D002723 ORTHO05D003240 9.4e-06 56.2 577 22.0


User provided reference genes

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