Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G787 Micromonas commoda HOM05D000142 ORTHO05D268235 2.3e-264 915.2 529 100.0
Cre01.g024200 Chlamydomonas reinhardtii HOM05D004266 ORTHO05D005151 2.1e-07 61.6 102 36.3
Cfa024121 Carpinus fangiana HOM05D000285 ORTHO05D001253 3.5e-07 60.8 100 37.0
Zm00001eb176260 Zea mays HOM05D000142 ORTHO05D001253 3.5e-07 60.8 87 37.9
PRCOL_00002013 Prasinoderma coloniale HOM05D004266 ORTHO05D005151 4.6e-07 60.5 89 38.2
Os09g0565200 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D001253 6.0e-07 60.1 105 36.2
Actinidia08837 Actinidia chinensis HOM05D000142 ORTHO05D001253 1.0e-06 59.3 104 34.6
Actinidia36762 Actinidia chinensis HOM05D000142 ORTHO05D001253 1.8e-06 58.5 104 34.6
AT4G24770 Arabidopsis thaliana HOM05D000142 ORTHO05D001253 2.3e-06 58.2 87 36.8
CSS0032937 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D001253 2.3e-06 58.2 104 35.6
PSO063G0618 Papaver somniferum HOM05D000142 ORTHO05D000124 2.3e-06 58.2 88 35.2
Sabra12G0065000 Salix brachista HOM05D000142 ORTHO05D001253 2.3e-06 58.2 108 34.3
Zm00001eb039630 Zea mays HOM05D000142 ORTHO05D001253 2.3e-06 58.2 104 35.6
Potri.012G090200 Populus trichocarpa HOM05D000142 ORTHO05D001253 3.0e-06 57.8 104 33.7
Zm00001eb306930 Zea mays HOM05D000142 ORTHO05D001253 3.9e-06 57.4 104 35.6
Os08g0557100 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D001253 5.1e-06 57.0 104 33.7
PSO017G7083 Papaver somniferum HOM05D000142 ORTHO05D000124 6.7e-06 56.6 88 34.1


User provided reference genes

Program Settings