Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 1.6e-100 369.4 179 100.0
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 3.1e-32 142.5 68 92.6
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 3.1e-32 142.5 68 92.6
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 5.0e-30 135.2 68 85.3
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 5.0e-30 135.2 68 85.3
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 6.5e-30 134.8 68 86.8
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 1.1e-29 134.0 65 92.3
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 1.1e-29 134.0 68 86.8
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 1.5e-29 133.7 68 85.3
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.5e-29 133.7 68 85.3
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 1.5e-29 133.7 68 85.3
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 1.5e-29 133.7 68 85.3
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 1.5e-29 133.7 68 85.3
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 1.5e-29 133.7 68 85.3
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 1.9e-29 133.3 68 85.3
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 83.8
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 83.8
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 83.8
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 83.8
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 3.2e-29 132.5 68 85.3
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 83.8
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 83.8
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 85.3
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 85.3
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 85.3
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 83.8
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 83.8
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 4.2e-29 132.1 68 83.8
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 5.5e-29 131.7 68 83.8
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.5e-29 131.7 68 85.3
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 85.3
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 7.2e-29 131.3 68 83.8
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 82.4
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 85.3
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 9.4e-29 131.0 68 83.8
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 82.4
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 83.8
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.2e-28 130.6 68 85.3
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 1.6e-28 130.2 68 80.9
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 1.6e-28 130.2 68 80.9
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 1.6e-28 130.2 68 80.9
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 1.6e-28 130.2 68 80.9
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 1.6e-28 130.2 68 80.9
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 82.4
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 83.8
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 83.8
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 83.8
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 83.8
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 82.4
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 82.4
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 80.9
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 2.1e-28 129.8 68 83.8
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 2.7e-28 129.4 68 83.8
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 2.7e-28 129.4 68 79.4
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 2.7e-28 129.4 68 80.9
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 2.7e-28 129.4 68 83.8
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 82.4
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 80.9
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 3.6e-28 129.0 68 82.4
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 83.8
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 82.4
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 83.8
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.6e-28 129.0 68 83.8
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 4.7e-28 128.6 68 83.8
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 4.7e-28 128.6 68 80.9
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 77.9
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 77.9
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 77.9
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 77.9
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 82.4
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 6.1e-28 128.3 66 84.8
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 6.1e-28 128.3 66 84.8
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 80.9
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 83.8
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 6.1e-28 128.3 68 82.4
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 8.0e-28 127.9 68 82.4
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 8.0e-28 127.9 68 80.9
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 8.0e-28 127.9 68 82.4
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 8.0e-28 127.9 68 83.8
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.0e-27 127.5 68 82.4
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 1.0e-27 127.5 68 82.4
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 1.0e-27 127.5 68 82.4
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 1.4e-27 127.1 68 82.4
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 3.9e-27 125.6 68 82.4
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 6.7e-27 124.8 74 77.0
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 1.1e-26 124.0 65 80.0
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 2.0e-26 123.2 78 73.1
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 5.7e-26 121.7 68 79.4
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 5.7e-26 121.7 66 80.3
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 2.2e-25 119.8 84 67.9
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 2.2e-25 119.8 68 75.0
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 2.8e-25 119.4 81 69.1
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.6e-20 103.6 51 86.3
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 4.7e-20 102.1 68 72.1
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 4.7e-20 102.1 51 88.2
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 1.0e-19 100.9 50 86.0
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 1.2e-18 97.4 53 79.2
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 2.0e-18 96.7 51 80.4
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 2.8e-17 92.8 55 76.4
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 7.0e-16 88.2 48 81.2
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 7.7e-15 84.7 66 56.1
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 2.9e-14 82.8 46 80.4
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 2.7e-12 76.3 44 75.0
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 3.0e-11 72.8 47 72.3
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 1.5e-10 70.5 41 75.6
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 2.6e-10 69.7 37 83.8
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.4e-10 68.9 39 74.4
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 4.9e-09 65.5 38 78.9
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 4.9e-09 65.5 29 89.7
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 4.9e-09 65.5 33 75.8
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 4.9e-09 65.5 33 75.8
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 7.0e-08 61.6 38 71.1
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 9.1e-08 61.2 29 86.2
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 1.6e-07 60.5 67 47.8
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 3.5e-07 59.3 38 71.1
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 4.5e-07 58.9 27 88.9
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 1.3e-06 57.4 34 70.6
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 2.3e-06 56.6 39 71.8
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 2.3e-06 56.6 51 49.0


User provided reference genes

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