Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.5e-195 685.3 348 100.0
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 9.7e-14 82.0 242 27.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.8e-13 80.5 246 26.8
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 6.3e-13 79.3 244 27.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 4.1e-12 76.6 257 24.9
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 5.3e-12 76.3 278 26.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 5.3e-12 76.3 244 26.6
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 7.0e-12 75.9 243 27.2
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.2e-11 75.1 278 26.3
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.2e-11 75.1 306 23.5
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.2e-11 75.1 244 26.2
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.6e-11 74.7 251 23.5
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.6e-11 74.7 244 26.6
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.0e-11 74.3 278 24.8
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 2.0e-11 74.3 246 24.8
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 2.7e-11 73.9 249 25.7
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.7e-11 73.9 296 24.7
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 3.5e-11 73.6 242 26.9
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.5e-11 73.2 272 26.1
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 4.5e-11 73.2 272 26.1
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 5.9e-11 72.8 271 24.7
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 5.9e-11 72.8 218 28.0
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 7.7e-11 72.4 278 25.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.0e-10 72.0 250 26.0
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.3e-10 71.6 266 24.4
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.3e-10 71.6 323 23.8
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 1.7e-10 71.2 264 25.4
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.7e-10 71.2 319 23.5
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.7e-10 71.2 243 26.7
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.7e-10 71.2 243 26.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.7e-10 71.2 319 24.8
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.7e-10 71.2 293 22.9
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.2e-10 70.9 245 24.9
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 2.2e-10 70.9 274 25.2
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 2.2e-10 70.9 245 24.9
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.2e-10 70.9 271 26.6
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 2.2e-10 70.9 268 25.0
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.2e-10 70.9 250 24.8
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 2.9e-10 70.5 245 25.3
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 2.9e-10 70.5 264 25.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 2.9e-10 70.5 264 25.0
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.9e-10 70.5 285 24.9
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.9e-10 70.5 266 24.8
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.9e-10 70.5 251 24.3
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 3.8e-10 70.1 245 24.9
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 3.8e-10 70.1 264 24.6
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 3.8e-10 70.1 244 25.8
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 3.8e-10 70.1 268 23.9
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.8e-10 70.1 218 25.7
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 5.0e-10 69.7 243 24.7
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 5.0e-10 69.7 240 26.2
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 6.5e-10 69.3 244 25.0
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 6.5e-10 69.3 271 24.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 6.5e-10 69.3 271 24.4
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 6.5e-10 69.3 245 24.1
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 6.5e-10 69.3 255 24.7
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 8.5e-10 68.9 236 25.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 8.5e-10 68.9 266 24.4
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 8.5e-10 68.9 219 26.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 8.5e-10 68.9 250 25.6
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.1e-09 68.6 218 26.6
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.1e-09 68.6 274 23.0
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.5e-09 68.2 288 24.3
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.5e-09 68.2 242 26.0
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-09 67.8 288 24.7
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.9e-09 67.8 244 23.8
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.9e-09 67.8 257 23.7
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.9e-09 67.8 244 24.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.9e-09 67.8 245 24.1
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 2.5e-09 67.4 266 23.7
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 2.5e-09 67.4 264 25.4
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.5e-09 67.4 264 25.4
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 4.2e-09 66.6 265 24.9
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 5.5e-09 66.2 251 24.7
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 5.5e-09 66.2 244 24.6
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.4e-09 65.5 242 25.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 9.4e-09 65.5 271 24.4
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.2e-08 65.1 243 24.7
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-08 64.7 242 23.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.6e-08 64.7 243 24.7
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.1e-08 64.3 244 25.8
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.1e-08 64.3 218 24.8
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 2.7e-08 63.9 263 24.7
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 2.7e-08 63.9 269 23.4
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.7e-08 63.9 242 23.6
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 2.7e-08 63.9 239 25.9
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 3.6e-08 63.5 242 25.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 4.7e-08 63.2 240 25.0
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.7e-08 63.2 240 25.0
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 4.7e-08 63.2 316 21.5
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.1e-08 62.8 278 25.2
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.1e-08 62.8 242 23.1
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 8.0e-08 62.4 216 25.0
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 3.0e-07 60.5 218 24.8
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.0e-07 60.5 210 25.2
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 4.0e-07 60.1 219 25.6
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 6.8e-07 59.3 268 23.1
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 8.8e-07 58.9 294 23.1
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 8.8e-07 58.9 191 27.2
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-06 58.5 217 23.5
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-06 57.4 188 24.5
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.4e-06 57.0 127 28.3
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.4e-06 56.6 196 25.0
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 4.4e-06 56.6 211 28.4
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 5.7e-06 56.2 190 24.2


User provided reference genes

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