Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G391 Micromonas commoda HOM05D006113 ORTHO05D007828 4.5e-220 767.7 406 100.0
Cre12.g513950 Chlamydomonas reinhardtii HOM05D006113 ORTHO05D007828 2.9e-86 323.2 407 47.2
CBR_g5705 Chara braunii HOM05D006113 ORTHO05D007828 8.5e-86 321.6 429 44.8
CBR_g5706 Chara braunii HOM05D006113 ORTHO05D007828 2.7e-84 316.6 429 44.3
Pp3c12_11290 Physcomitrium patens HOM05D006113 ORTHO05D007828 5.7e-82 308.9 414 45.4
PRCOL_00003470 Prasinoderma coloniale HOM05D006113 ORTHO05D007828 3.8e-78 296.2 422 43.8
Mapoly0097s0089 Marchantia polymorpha HOM05D006113 ORTHO05D007828 6.5e-78 295.4 408 43.6
Lj2g0019507 Lotus japonicus HOM05D006113 ORTHO05D007828 2.5e-77 293.5 399 44.9
AagrBONN_evm.TU.Sc2ySwM_228.790 Anthoceros agrestis HOM05D006113 ORTHO05D007828 4.2e-77 292.7 465 40.4
Eucgr.E00301 Eucalyptus grandis HOM05D006113 ORTHO05D007828 3.0e-75 286.6 399 43.9
AT1G32500 Arabidopsis thaliana HOM05D006113 ORTHO05D007828 1.2e-74 284.6 413 41.9
CARHR031950 Cardamine hirsuta HOM05D006113 ORTHO05D007828 1.5e-74 284.3 408 42.2
BcaC05g27850 Brassica carinata HOM05D006113 ORTHO05D007828 2.0e-74 283.9 413 42.6
C05p38480 Brassica napus HOM05D006113 ORTHO05D007828 2.0e-74 283.9 413 42.6
BolC5t32582H Brassica oleracea HOM05D006113 ORTHO05D007828 2.0e-74 283.9 413 42.6
Ciclev10031360m.g Citrus clementina HOM05D006113 ORTHO05D007828 2.6e-74 283.5 405 43.0
arahy.Tifrunner.gnm1.ann1.C9Y7N1 Arachis hypogaea HOM05D006113 ORTHO05D007828 3.4e-74 283.1 413 42.1
arahy.Tifrunner.gnm1.ann1.LSM77P Arachis hypogaea HOM05D006113 ORTHO05D007828 3.4e-74 283.1 413 42.1
A05p24790 Brassica napus HOM05D006113 ORTHO05D007828 4.4e-74 282.7 413 42.6
BraA05t21362Z Brassica rapa HOM05D006113 ORTHO05D007828 4.4e-74 282.7 413 42.6
SEGI_13135 Sequoiadendron giganteum HOM05D006113 ORTHO05D007828 5.7e-74 282.3 400 42.0
Carub.0001s3091 Capsella rubella HOM05D006113 ORTHO05D007828 7.5e-74 282.0 417 41.5
Sp1g28400 Schrenkiella parvula HOM05D006113 ORTHO05D007828 7.5e-74 282.0 408 42.4
Sed0027774 Sechium edule HOM05D006113 ORTHO05D007828 7.5e-74 282.0 401 42.6
MBI18_g17018_MAGBIO Magnolia biondii HOM05D006113 ORTHO05D007828 9.8e-74 281.6 406 41.6
Migut.E01131 Erythranthe guttata HOM05D006113 ORTHO05D007828 1.7e-73 280.8 405 42.0
Potri.001G144500 Populus trichocarpa HOM05D006113 ORTHO05D007828 2.2e-73 280.4 401 42.9
Sabra01G0112900 Salix brachista HOM05D006113 ORTHO05D007828 2.2e-73 280.4 401 42.9
BcaB03g13726 Brassica carinata HOM05D006113 ORTHO05D007828 3.7e-73 279.6 417 42.0
COL.COLO4_17073 Corchorus olitorius HOM05D006113 ORTHO05D007828 6.3e-73 278.9 404 42.3
Thhalv10007401m.g Eutrema salsugineum HOM05D006113 ORTHO05D007828 6.3e-73 278.9 406 42.6
Aa31LG2G13450 Aethionema arabicum HOM05D006113 ORTHO05D007828 8.3e-73 278.5 398 42.7
Gohir.D08G178600 Gossypium hirsutum HOM05D006113 ORTHO05D007828 8.3e-73 278.5 409 42.3
Potri.003G089700 Populus trichocarpa HOM05D006113 ORTHO05D007828 1.4e-72 277.7 407 41.8
AL1G46750 Arabidopsis lyrata HOM05D006113 ORTHO05D007828 1.8e-72 277.3 413 40.9
vmacro14161 Vaccinium macrocarpon HOM05D006113 ORTHO05D007828 3.1e-72 276.6 406 41.6
CSS0019238 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 4.1e-72 276.2 406 41.1
CSS0023186 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 4.1e-72 276.2 406 41.1
Gohir.A08G158300 Gossypium hirsutum HOM05D006113 ORTHO05D007828 4.1e-72 276.2 409 42.1
Manes.05G117026 Manihot esculenta HOM05D006113 ORTHO05D007828 4.1e-72 276.2 400 42.5
Hund14417 Selenicereus undatus HOM05D006113 ORTHO05D007828 5.4e-72 275.8 398 42.7
EL10Ac1g02288 Beta vulgaris HOM05D006113 ORTHO05D007828 7.0e-72 275.4 400 42.2
Rhsim07G0124800 Rhododendron simsii HOM05D006113 ORTHO05D007828 7.0e-72 275.4 405 41.7
Gorai.004G186900 Gossypium raimondii HOM05D006113 ORTHO05D007828 9.1e-72 275.0 409 42.1
Lsat_1_v5_gn_3_16601 Lactuca sativa HOM05D006113 ORTHO05D007828 9.1e-72 275.0 412 39.6
Thecc.03G231000 Theobroma cacao HOM05D006113 ORTHO05D007828 9.1e-72 275.0 411 42.6
HanXRQChr06g0167341 Helianthus annuus HOM05D006113 ORTHO05D007828 1.2e-71 274.6 410 40.2
Duzib205G1867 Durio zibethinus HOM05D006113 ORTHO05D007828 2.0e-71 273.9 409 42.3
DCAR_008285 Daucus carota HOM05D006113 ORTHO05D007828 3.5e-71 273.1 399 42.4
AUR62007248 Chenopodium quinoa HOM05D006113 ORTHO05D007828 5.9e-71 272.3 401 41.6
SMO356G0179 Selaginella moellendorffii HOM05D006113 ORTHO05D007828 7.7e-71 271.9 408 40.0
THA.LOC104807962 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 7.7e-71 271.9 412 40.5
HanXRQChr17g0535731 Helianthus annuus HOM05D006113 ORTHO05D007828 1.0e-70 271.6 409 39.9
Lalb_Chr05g0214021 Lupinus albus HOM05D006113 ORTHO05D007828 1.0e-70 271.6 409 41.1
CAN.G845.35 Capsicum annuum HOM05D006113 ORTHO05D007828 1.3e-70 271.2 404 40.6
Atru.chr6.1754 Acer truncatum HOM05D006113 ORTHO05D007828 1.7e-70 270.8 406 41.6
Aqoxy3G00478 Aquilegia oxysepala HOM05D006113 ORTHO05D007828 1.7e-70 270.8 412 39.8
Lj8A291G57 Lonicera japonica HOM05D006113 ORTHO05D007828 1.7e-70 270.8 393 43.3
PGR042G1735 Punica granatum HOM05D006113 ORTHO05D007828 1.7e-70 270.8 411 40.6
Ca_24644_v3 Cicer arietinum L. HOM05D006113 ORTHO05D007828 2.3e-70 270.4 331 46.2
CsaV3_3G049370 Cucumis sativus L. HOM05D006113 ORTHO05D007828 3.8e-70 269.6 403 42.2
MD09G1232600 Malus domestica HOM05D006113 ORTHO05D007828 3.8e-70 269.6 407 41.3
Sc22g0001480 Simmondsia chinensis HOM05D006113 ORTHO05D007828 6.6e-70 268.9 404 41.3
Sopen08g002980 Solanum pennellii HOM05D006113 ORTHO05D007828 6.6e-70 268.9 408 39.5
TWI60G1370 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 8.6e-70 268.5 408 41.9
TWI81G0082 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 1.1e-69 268.1 407 41.3
HPP92_003349 Vanilla planifolia HOM05D006113 ORTHO05D007828 1.5e-69 267.7 417 40.0
MELO3C003389.2 Cucumis melo HOM05D006113 ORTHO05D007828 1.9e-69 267.3 401 42.1
Dinv28932 Davidia involucrata HOM05D006113 ORTHO05D007828 2.5e-69 266.9 407 39.6
Oeu062745.2 Olea europaea HOM05D006113 ORTHO05D007828 3.3e-69 266.5 397 40.8
THA.LOC104814434 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 3.3e-69 266.5 420 41.2
GSVIVG01013180001 Vitis vinifera HOM05D006113 ORTHO05D007828 3.3e-69 266.5 406 38.9
MSTRG.12007 Avicennia marina HOM05D006113 ORTHO05D007828 5.5e-69 265.8 397 40.6
Cc08_g02430 Coffea canephora HOM05D006113 ORTHO05D007828 5.5e-69 265.8 408 40.2
CANSAT21G0754 Cannabis sativa HOM05D006113 ORTHO05D007828 7.2e-69 265.4 407 41.3
Prupe.1G552500 Prunus persica HOM05D006113 ORTHO05D007828 7.2e-69 265.4 408 41.2
Solyc08g007010.4 Solanum lycopersicum HOM05D006113 ORTHO05D007828 7.2e-69 265.4 290 46.6
CSS0010269 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 9.5e-69 265.0 402 39.6
SalBow1G7584 Salvia bowleyana HOM05D006113 ORTHO05D007828 9.5e-69 265.0 395 41.0
Peaxi162Scf00102g00639 Petunia axillaris HOM05D006113 ORTHO05D007828 1.6e-68 264.2 408 39.2
Ah.12g054610 Amaranthus hybridus HOM05D006113 ORTHO05D007828 2.8e-68 263.5 400 40.2
Phvul.002G006200 Phaseolus vulgaris HOM05D006113 ORTHO05D007828 2.8e-68 263.5 286 48.6
SGA_v2.0_scaffold385G50460 Striga asiatica HOM05D006113 ORTHO05D007828 2.8e-68 263.5 396 40.9
RcHm_v2.0_Chr6g0269051 Rosa chinensis HOM05D006113 ORTHO05D007828 3.6e-68 263.1 412 40.8
PGSC0003DMG400020501 Solanum tuberosum HOM05D006113 ORTHO05D007828 3.6e-68 263.1 411 39.2
Medtr5g014290 Medicago truncatula HOM05D006113 ORTHO05D007828 4.7e-68 262.7 404 40.1
Nitab4.5_0000535g0010 Nicotiana tabacum HOM05D006113 ORTHO05D007828 4.7e-68 262.7 411 39.2
unitig_52.g17240 Utricularia gibba HOM05D006113 ORTHO05D007828 4.7e-68 262.7 402 40.8
VMungo1215G1026 Vigna mungo HOM05D006113 ORTHO05D007828 1.8e-67 260.8 293 47.1
Cfa012411 Carpinus fangiana HOM05D006113 ORTHO05D007828 6.8e-67 258.8 421 39.4
ECA246G3200 Erigeron canadensis HOM05D006113 ORTHO05D007828 8.9e-67 258.5 411 39.2
Glyma.11G042400 Glycine max HOM05D006113 ORTHO05D007828 8.9e-67 258.5 411 39.2
Nitab4.5_0000804g0060 Nicotiana tabacum HOM05D006113 ORTHO05D007828 1.2e-66 258.1 390 40.3
PSO017G4443 Papaver somniferum HOM05D006113 ORTHO05D007828 1.5e-66 257.7 408 40.2
FvH4_6g31710 Fragaria vesca HOM05D006113 ORTHO05D007828 5.7e-66 255.8 413 39.5
FAN09G0007 Fragaria x ananassa HOM05D006113 ORTHO05D007828 7.5e-66 255.4 406 39.7
ATR0680G232 Amborella trichopoda HOM05D006113 ORTHO05D007828 2.8e-65 253.4 243 51.0
FAN05G0306 Fragaria x ananassa HOM05D006113 ORTHO05D007828 2.8e-65 253.4 405 39.8
FAN02G2000 Fragaria x ananassa HOM05D006113 ORTHO05D007828 4.9e-65 252.7 411 38.9
PSO478G3605 Papaver somniferum HOM05D006113 ORTHO05D007828 6.3e-65 252.3 407 39.8
CiPaw.11G091200 Carya illinoinensis HOM05D006113 ORTHO05D007828 3.1e-64 250.0 409 39.9
Os01g0127300 Oryza sativa ssp. japonica HOM05D006113 ORTHO05D007828 3.9e-62 243.0 408 40.2
Haze_08267 Corylus avellana HOM05D006113 ORTHO05D007828 6.1e-60 235.7 464 35.1
Zm00001eb335220 Zea mays HOM05D006113 ORTHO05D007828 6.8e-59 232.3 403 39.0
GSVIVG01015822001 Vitis vinifera HOM05D006113 ORTHO05D007828 8.6e-54 215.3 199 49.7
AUR62018750 Chenopodium quinoa HOM05D006113 ORTHO05D007828 5.2e-51 206.1 164 59.1
TPR.G7828 Trifolium pratense HOM05D006113 ORTHO05D007828 5.2e-51 206.1 170 55.9
QL12p006235 Quercus lobata HOM05D006113 ORTHO05D007828 1.2e-50 204.9 533 30.2
Cpa.g.c32163 Carica papaya HOM05D006113 ORTHO05D007828 9.8e-50 201.8 159 59.1
Glyma.01G199500 Glycine max HOM05D006113 ORTHO05D007828 1.5e-45 188.0 290 40.3
PSO478G2563 Papaver somniferum HOM05D006113 ORTHO05D007828 2.6e-42 177.2 409 31.5
Nn3g17324 Nelumbo nucifera HOM05D006113 ORTHO05D007828 2.9e-41 173.7 318 38.1
Sed0023119 Sechium edule HOM05D006113 ORTHO05D007828 2.1e-39 167.5 164 50.6
ClCG09G012180 Citrullus lanatus HOM05D006113 ORTHO05D007828 4.6e-39 166.4 321 36.8
Pp3c4_5260 Physcomitrium patens HOM05D006113 ORTHO05D007828 9.5e-37 158.7 126 59.5
Psat2g173560 Pisum sativum HOM05D006113 ORTHO05D007828 4.0e-35 153.3 319 35.1
QL12p004317 Quercus lobata HOM05D006113 ORTHO05D007828 5.3e-27 126.3 202 38.1
TAR371G1082 Trochodendron aralioides HOM05D006113 ORTHO05D007828 5.1e-22 109.8 87 57.5
PSO782G1575 Papaver somniferum HOM05D006113 ORTHO05D007828 1.5e-21 108.2 331 28.4
ClCG09G012190 Citrullus lanatus HOM05D006113 ORTHO05D007828 1.9e-21 107.8 86 58.1
Cpa.g.sc90.55 Carica papaya HOM05D006113 ORTHO05D007828 5.1e-14 83.2 235 31.5
TPR.G17447 Trifolium pratense HOM05D006113 ORTHO05D007828 8.7e-14 82.4 244 32.8
AUR62018751 Chenopodium quinoa HOM05D006113 ORTHO05D007828 2.4e-11 74.3 234 31.2
VMungo0540G2353 Vigna mungo HOM05D006113 ORTHO05D000647 1.9e-08 64.7 67 46.3
BcaC05g27849 Brassica carinata HOM05D006113 ORTHO05D007828 1.8e-06 58.2 236 30.9


User provided reference genes

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