Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.8e-235 818.9 427 100.0
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.8e-54 217.6 320 41.2
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 6.3e-47 192.6 285 38.9
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 5.0e-44 183.0 238 42.9
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.2e-42 178.3 220 43.2
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 2.6e-40 170.6 278 37.8
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 5.7e-40 169.5 206 41.7
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 9.7e-40 168.7 207 42.0
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 2.2e-39 167.5 185 47.6
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 3.7e-39 166.8 207 41.1
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 4.8e-39 166.4 276 35.9
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 6.3e-39 166.0 279 35.5
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 8.2e-39 165.6 207 41.5
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 4.1e-38 163.3 282 37.2
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.2e-37 161.8 277 35.7
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 2.0e-37 161.0 208 41.8
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 2.6e-37 160.6 233 36.9
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 2.6e-37 160.6 278 36.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 2.6e-37 160.6 212 40.1
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 3.5e-37 160.2 277 34.3
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 7.7e-37 159.1 294 35.7
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.0e-36 158.7 278 36.3
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.0e-36 158.7 277 35.4
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.0e-36 158.7 207 39.1
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.0e-36 158.7 207 41.1
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 2.2e-36 157.5 227 36.1
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 2.2e-36 157.5 212 39.6
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 2.9e-36 157.1 276 33.7
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 2.9e-36 157.1 282 36.9
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 3.8e-36 156.8 278 35.6
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 3.8e-36 156.8 207 39.6
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 5.0e-36 156.4 293 35.5
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 5.0e-36 156.4 278 36.3
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 6.5e-36 156.0 207 39.1
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 6.5e-36 156.0 277 35.7
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 6.5e-36 156.0 224 38.4
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 6.5e-36 156.0 290 33.4
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.1e-35 155.2 280 35.0
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.1e-35 155.2 278 35.6
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.1e-35 155.2 207 37.7
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.5e-35 154.8 334 35.0
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.5e-35 154.8 278 34.9
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.5e-35 154.8 277 35.4
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.5e-35 154.8 279 35.5
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 1.9e-35 154.5 220 38.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 2.5e-35 154.1 302 34.8
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 2.5e-35 154.1 321 33.6
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 2.5e-35 154.1 293 35.2
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 3.2e-35 153.7 285 36.8
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 3.2e-35 153.7 186 41.4
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 3.2e-35 153.7 207 39.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 3.2e-35 153.7 186 41.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 3.2e-35 153.7 297 34.7
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 4.2e-35 153.3 210 40.5
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 4.2e-35 153.3 208 39.4
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 5.5e-35 152.9 277 34.3
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 7.2e-35 152.5 296 34.8
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 7.2e-35 152.5 225 36.9
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 9.4e-35 152.1 299 35.8
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 9.4e-35 152.1 297 35.0
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 9.4e-35 152.1 207 39.6
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 9.4e-35 152.1 224 37.5
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 1.2e-34 151.8 277 35.0
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.2e-34 151.8 292 32.9
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 2.1e-34 151.0 288 34.7
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.1e-34 151.0 209 39.2
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.1e-34 151.0 277 34.7
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 2.7e-34 150.6 300 35.7
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 3.6e-34 150.2 301 34.6
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 3.6e-34 150.2 277 35.7
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 3.6e-34 150.2 277 33.9
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.6e-34 150.2 292 33.9
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.6e-34 150.2 292 33.9
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.6e-34 150.2 292 33.9
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 4.7e-34 149.8 296 34.1
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.7e-34 149.8 280 32.9
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.7e-34 149.8 280 32.9
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 4.7e-34 149.8 208 38.9
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 4.7e-34 149.8 204 40.2
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 6.1e-34 149.4 280 32.9
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 6.1e-34 149.4 280 32.9
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 6.1e-34 149.4 220 38.2
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 6.1e-34 149.4 301 34.2
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 6.1e-34 149.4 277 33.9
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.0e-33 148.7 292 34.2
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.0e-33 148.7 278 34.9
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 1.0e-33 148.7 221 37.6
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 1.0e-33 148.7 293 35.2
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 1.4e-33 148.3 302 34.1
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 1.4e-33 148.3 304 34.5
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.4e-33 148.3 304 34.5
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-33 147.9 295 34.6
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 1.8e-33 147.9 295 34.6
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.8e-33 147.9 294 33.3
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.3e-33 147.5 277 34.3
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.3e-33 147.5 277 34.3
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 3.9e-33 146.7 301 33.9
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 6.7e-33 146.0 291 31.6
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 8.8e-33 145.6 277 35.4
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 8.8e-33 145.6 295 35.6
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 8.8e-33 145.6 295 35.6
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 1.1e-32 145.2 299 34.1
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.1e-32 145.2 209 35.9
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.0e-32 144.4 284 33.1
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.6e-32 144.1 299 33.8
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 4.4e-32 143.3 293 34.8
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.2e-29 135.2 246 32.1
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 7.7e-29 132.5 185 41.1
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 5.0e-28 129.8 347 28.5
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.1e-27 128.6 212 34.4
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.9e-27 127.9 339 30.4
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.2e-26 125.2 328 30.5
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 4.7e-26 123.2 225 32.4
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 5.2e-25 119.8 305 30.8
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 8.8e-25 119.0 299 32.8
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.4e-22 111.7 170 36.5
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 7.0e-22 109.4 275 30.2
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 7.0e-22 109.4 216 31.5
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.5e-21 107.1 268 30.2
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 3.8e-20 103.6 148 37.2
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 5.0e-20 103.2 295 29.5
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 3.0e-17 94.0 104 43.3
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 5.7e-16 89.7 90 47.8
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.3e-15 88.6 143 32.9
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 8.3e-15 85.9 200 32.5
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.1e-14 85.5 201 29.9
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.8e-14 84.7 219 30.1
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 1.3e-12 78.6 200 29.0
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.2e-08 65.5 76 47.4
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 2.2e-07 61.2 49 55.1
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 6.3e-07 59.7 47 53.2
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-06 58.2 54 46.3
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.4e-06 56.6 179 29.6


User provided reference genes

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