Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.7e-111 406.0 204 100.0
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 4.1e-28 129.0 224 41.1
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 1.0e-18 97.8 244 29.9
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 2.1e-16 90.1 236 25.8
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 9.7e-14 81.3 215 28.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 9.7e-14 81.3 209 31.1
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.7e-13 79.3 220 27.3
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 4.8e-13 79.0 214 31.3
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 4.8e-13 79.0 213 28.6
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 4.8e-13 79.0 214 30.4
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 6.3e-13 78.6 213 30.5
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 6.3e-13 78.6 214 30.8
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 6.3e-13 78.6 215 28.4
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 8.2e-13 78.2 209 32.1
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 8.2e-13 78.2 217 30.9
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.1e-12 77.8 197 31.0
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.4e-12 77.4 207 28.0
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.4e-12 77.4 212 29.2
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.8e-12 77.0 212 29.7
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 2.4e-12 76.6 216 31.0
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.4e-12 76.6 208 29.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 3.1e-12 76.3 217 30.4
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 4.1e-12 75.9 213 31.5
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 5.3e-12 75.5 210 29.5
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.3e-12 75.5 211 27.5
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 5.3e-12 75.5 209 29.7
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 7.0e-12 75.1 209 27.8
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 7.0e-12 75.1 213 27.7
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 7.0e-12 75.1 213 31.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 9.1e-12 74.7 211 28.0
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.2e-11 74.3 212 30.2
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.6e-11 73.9 214 28.5
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 2.0e-11 73.6 213 30.0
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.0e-11 73.6 210 28.6
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.7e-11 73.2 214 29.4
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 2.7e-11 73.2 217 25.3
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 2.7e-11 73.2 210 30.5
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.7e-11 73.2 210 30.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.7e-11 73.2 211 30.3
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.7e-11 73.2 211 27.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.5e-11 72.8 210 28.6
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 3.5e-11 72.8 220 29.1
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.5e-11 72.8 214 29.4
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 3.5e-11 72.8 215 28.4
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.5e-11 72.8 208 28.4
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 3.5e-11 72.8 213 29.1
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.5e-11 72.8 217 29.5
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 4.5e-11 72.4 140 32.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.5e-11 72.4 213 29.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 5.9e-11 72.0 207 29.0
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.9e-11 72.0 211 30.3
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.9e-11 72.0 209 28.2
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 5.9e-11 72.0 214 29.4
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 7.7e-11 71.6 210 29.0
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 7.7e-11 71.6 219 26.5
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 7.7e-11 71.6 210 30.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 7.7e-11 71.6 209 28.2
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 7.7e-11 71.6 209 28.7
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-10 71.2 214 27.6
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.0e-10 71.2 213 29.6
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.3e-10 70.9 210 28.6
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.3e-10 70.9 210 28.6
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.7e-10 70.5 168 29.8
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.7e-10 70.5 214 27.6
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 2.2e-10 70.1 212 25.9
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.2e-10 70.1 209 28.2
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.9e-10 69.7 212 27.8
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.8e-10 69.3 214 30.4
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 3.8e-10 69.3 213 28.6
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 5.0e-10 68.9 210 27.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 5.0e-10 68.9 210 27.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 5.0e-10 68.9 209 26.3
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 5.0e-10 68.9 213 27.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 6.5e-10 68.6 207 29.5
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 8.5e-10 68.2 214 26.2
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.1e-09 67.8 210 27.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.1e-09 67.8 210 27.6
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.1e-09 67.8 210 29.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.1e-09 67.8 214 28.5
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.5e-09 67.4 213 30.0
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.9e-09 67.0 212 28.8
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.9e-09 67.0 209 27.8
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.5e-09 66.6 210 27.6
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 3.2e-09 66.2 213 26.8
Cre13.g572800 Chlamydomonas reinhardtii HOM05D028917 ORTHO05D023487 3.2e-09 66.2 155 29.7
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 3.2e-09 66.2 213 26.3
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 3.2e-09 66.2 211 28.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.2e-09 66.2 211 28.0
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 4.2e-09 65.9 210 27.6
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 5.5e-09 65.5 213 26.3
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 5.5e-09 65.5 210 27.6
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.5e-09 65.5 210 27.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.1e-08 63.5 212 25.5
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 6.1e-08 62.0 228 27.2
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 8.0e-08 61.6 213 26.8
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.0e-07 61.2 202 29.2
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.3e-07 60.1 165 27.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 8.8e-07 58.2 228 26.3
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 7.5e-06 55.1 99 32.3
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 9.8e-06 54.7 99 32.3


User provided reference genes

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