Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G101 Micromonas commoda HOM05D000041 ORTHO05D006140 0.0e+00 1703.3 862 100.0
MCO11G242 Micromonas commoda HOM05D000041 ORTHO05D006140 5.2e-16 90.9 157 34.4
CANSAT80G0179 Cannabis sativa HOM05D000041 ORTHO05D006140 2.0e-15 89.0 302 25.5
SEGI_30138 Sequoiadendron giganteum HOM05D000041 ORTHO05D006140 5.7e-15 87.4 156 33.3
PSO017G0721 Papaver somniferum HOM05D000041 ORTHO05D006140 2.2e-14 85.5 356 26.1
ATR0730G006 Amborella trichopoda HOM05D000041 ORTHO05D006140 3.7e-14 84.7 159 32.7
FvH4_5g14510 Fragaria vesca HOM05D000041 ORTHO05D006140 4.9e-14 84.3 357 25.2
ECA246G3346 Erigeron canadensis HOM05D000041 ORTHO05D006140 1.1e-13 83.2 156 33.3
FAN18G2506 Fragaria x ananassa HOM05D000041 ORTHO05D006140 1.1e-13 83.2 335 25.4
Gorai.001G079100 Gossypium raimondii HOM05D000041 ORTHO05D006140 1.1e-13 83.2 337 25.5
Mapoly0007s0251 Marchantia polymorpha HOM05D000041 ORTHO05D006140 1.1e-13 83.2 225 31.6
Oeu052459.1 Olea europaea HOM05D000041 ORTHO05D006140 1.4e-13 82.8 154 32.5
Pp3c15_14620 Physcomitrium patens HOM05D000041 ORTHO05D006140 1.4e-13 82.8 155 34.8
Prupe.5G198700 Prunus persica HOM05D000041 ORTHO05D006140 1.4e-13 82.8 335 25.7
Ciclev10020015m.g Citrus clementina HOM05D000041 ORTHO05D006140 1.8e-13 82.4 293 25.3
ECA247G0382 Erigeron canadensis HOM05D000041 ORTHO05D006140 1.8e-13 82.4 293 26.6
HanXRQChr08g0236771 Helianthus annuus HOM05D000041 ORTHO05D006140 2.4e-13 82.0 154 33.8
Zm00001eb020460 Zea mays HOM05D000041 ORTHO05D006140 2.4e-13 82.0 235 28.9
Aqoxy3G03493 Aquilegia oxysepala HOM05D000041 ORTHO05D006140 3.1e-13 81.6 344 24.4
Eucgr.B00542 Eucalyptus grandis HOM05D000041 ORTHO05D006140 3.1e-13 81.6 349 25.8
Lsat_1_v5_gn_5_21580 Lactuca sativa HOM05D000041 ORTHO05D006140 3.1e-13 81.6 154 33.1
Actinidia19018 Actinidia chinensis HOM05D000041 ORTHO05D006140 4.1e-13 81.3 356 24.7
FAN08G1333 Fragaria x ananassa HOM05D000041 ORTHO05D006140 4.1e-13 81.3 335 25.1
Sp1g16630 Schrenkiella parvula HOM05D000041 ORTHO05D006140 4.1e-13 81.3 345 24.9
CARHR019290 Cardamine hirsuta HOM05D000041 ORTHO05D006140 5.4e-13 80.9 334 25.1
CiPaw.11G047400 Carya illinoinensis HOM05D000041 ORTHO05D006140 5.4e-13 80.9 287 25.4
Gohir.A07G070500 Gossypium hirsutum HOM05D000041 ORTHO05D006140 5.4e-13 80.9 337 25.5
Sc04g0002810 Simmondsia chinensis HOM05D000041 ORTHO05D006140 5.4e-13 80.9 166 29.5
Atru.chr9.344 Acer truncatum HOM05D000041 ORTHO05D006140 7.0e-13 80.5 283 25.4
AL1G31110 Arabidopsis lyrata HOM05D000041 ORTHO05D006140 7.0e-13 80.5 334 25.1
Actinidia04865 Actinidia chinensis HOM05D000041 ORTHO05D006140 9.2e-13 80.1 372 24.5
Dinv10659 Davidia involucrata HOM05D000041 ORTHO05D006140 9.2e-13 80.1 163 32.5
TWI60G1324 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 9.2e-13 80.1 338 24.3
Carub.0001s1829 Capsella rubella HOM05D000041 ORTHO05D006140 1.2e-12 79.7 334 24.9
Duzib205G1692 Durio zibethinus HOM05D000041 ORTHO05D006140 1.2e-12 79.7 338 25.1
RcHm_v2.0_Chr7g0182141 Rosa chinensis HOM05D000041 ORTHO05D006140 1.2e-12 79.7 357 25.2
Hund11349 Selenicereus undatus HOM05D000041 ORTHO05D006140 1.2e-12 79.7 304 24.7
Ah.02g113790 Amaranthus hybridus HOM05D000041 ORTHO05D006140 1.6e-12 79.3 303 24.1
AT1G18660 Arabidopsis thaliana HOM05D000041 ORTHO05D006140 1.6e-12 79.3 334 25.1
HanXRQChr04g0107201 Helianthus annuus HOM05D000041 ORTHO05D006140 1.6e-12 79.3 154 32.5
Lsat_1_v5_gn_1_14381 Lactuca sativa HOM05D000041 ORTHO05D006140 1.6e-12 79.3 154 31.8
Lalb_Chr08g0235431 Lupinus albus HOM05D000041 ORTHO05D006140 1.6e-12 79.3 154 31.8
MD14G1205300 Malus domestica HOM05D000041 ORTHO05D006140 1.6e-12 79.3 157 30.6
arahy.Tifrunner.gnm1.ann1.C7Z6YQ Arachis hypogaea HOM05D000041 ORTHO05D006140 2.0e-12 79.0 154 31.8
arahy.Tifrunner.gnm1.ann1.JQ6XER Arachis hypogaea HOM05D000041 ORTHO05D006140 2.0e-12 79.0 154 31.8
PSO478G5294 Papaver somniferum HOM05D000041 ORTHO05D000061 2.0e-12 79.0 337 25.8
THA.LOC104813886 Tarenaya hassleriana HOM05D000041 ORTHO05D006140 2.0e-12 79.0 163 32.5
vmacro17573 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 2.0e-12 79.0 157 31.2
A09p59780 Brassica napus HOM05D000041 ORTHO05D006140 2.7e-12 78.6 336 25.9
CDE04G1628 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 2.7e-12 78.6 156 31.4
Duzib084G1175 Durio zibethinus HOM05D000041 ORTHO05D006140 2.7e-12 78.6 338 24.9
Thhalv10007493m.g Eutrema salsugineum HOM05D000041 ORTHO05D006140 2.7e-12 78.6 336 25.6
Rhsim12G0153700 Rhododendron simsii HOM05D000041 ORTHO05D006140 2.7e-12 78.6 157 31.8
TAR629G1015 Trochodendron aralioides HOM05D000041 ORTHO05D006140 2.7e-12 78.6 157 29.3
C08p43200 Brassica napus HOM05D000041 ORTHO05D006140 3.5e-12 78.2 296 25.3
BolC5t30395H Brassica oleracea HOM05D000041 ORTHO05D006140 3.5e-12 78.2 334 24.9
CSS0039287 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 3.5e-12 78.2 157 32.5
CDE02G0410 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 3.5e-12 78.2 156 30.8
BcaC05g25761 Brassica carinata HOM05D000041 ORTHO05D006140 4.5e-12 77.8 334 24.9
C05p16920 Brassica napus HOM05D000041 ORTHO05D006140 4.5e-12 77.8 334 24.9
BraA09t41355Z Brassica rapa HOM05D000041 ORTHO05D006140 4.5e-12 77.8 296 25.3
Nitab4.5_0001211g0200 Nicotiana tabacum HOM05D000041 ORTHO05D006140 4.5e-12 77.8 162 29.6
Rhsim08G0152000 Rhododendron simsii HOM05D000041 ORTHO05D006140 4.5e-12 77.8 157 30.6
A06p14770 Brassica napus HOM05D000041 ORTHO05D006140 5.9e-12 77.4 334 24.9
BraA06t24600Z Brassica rapa HOM05D000041 ORTHO05D006140 5.9e-12 77.4 334 24.9
Glyma.06G196600 Glycine max HOM05D000041 ORTHO05D006140 5.9e-12 77.4 285 26.3
MD06G1197800 Malus domestica HOM05D000041 ORTHO05D006140 5.9e-12 77.4 157 29.9
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 5.9e-12 77.4 334 25.4
unitig_0.g773 Utricularia gibba HOM05D000041 ORTHO05D006140 5.9e-12 77.4 158 32.9
Aa31LG7G3420 Aethionema arabicum HOM05D000041 ORTHO05D006140 7.8e-12 77.0 338 24.9
AagrBONN_evm.TU.Sc2ySwM_344.2038 Anthoceros agrestis HOM05D000041 ORTHO05D006140 7.8e-12 77.0 153 31.4
BcaB03g14492 Brassica carinata HOM05D000041 ORTHO05D006140 7.8e-12 77.0 168 30.4
TPR.G12274 Trifolium pratense HOM05D000041 ORTHO05D006140 7.8e-12 77.0 166 31.3
Ca_14694_v3 Cicer arietinum L. HOM05D000041 ORTHO05D006140 1.0e-11 76.6 293 26.3
Dinv38747 Davidia involucrata HOM05D000041 ORTHO05D006140 1.0e-11 76.6 157 29.9
FAN13G2854 Fragaria x ananassa HOM05D000041 ORTHO05D006140 1.0e-11 76.6 157 29.3
PRCOL_00003458 Prasinoderma coloniale HOM05D000041 ORTHO05D006140 1.0e-11 76.6 425 27.1
BolC8t51874H Brassica oleracea HOM05D000041 ORTHO05D006140 1.3e-11 76.3 296 25.0
DCAR_016582 Daucus carota HOM05D000041 ORTHO05D006140 1.3e-11 76.3 352 23.6
DCAR_026036 Daucus carota HOM05D000041 ORTHO05D006140 1.3e-11 76.3 154 29.2
Hma1.2p1_0060F.1_g033480 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 1.3e-11 76.3 184 30.4
Hma1.2p1_2933F.1_g330550 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 1.3e-11 76.3 184 30.4
Lj5A107T101 Lonicera japonica HOM05D000041 ORTHO05D006140 1.3e-11 76.3 300 24.7
CSS0043787 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 1.7e-11 75.9 157 29.9
Lj9A467T86 Lonicera japonica HOM05D000041 ORTHO05D006140 1.7e-11 75.9 156 30.1
Nn4g23280 Nelumbo nucifera HOM05D000041 ORTHO05D006140 1.7e-11 75.9 156 29.5
VMungo1309G2906 Vigna mungo HOM05D000041 ORTHO05D006140 1.7e-11 75.9 153 32.0
BcaB07g31886 Brassica carinata HOM05D000041 ORTHO05D006140 2.3e-11 75.5 168 29.8
Medtr3g037230 Medicago truncatula HOM05D000041 ORTHO05D006140 2.3e-11 75.5 166 30.7
Nitab4.5_0002756g0120 Nicotiana tabacum HOM05D000041 ORTHO05D006140 2.3e-11 75.5 156 30.1
Sed0001387 Sechium edule HOM05D000041 ORTHO05D006140 2.3e-11 75.5 289 24.2
EL10Ac5g11065 Beta vulgaris HOM05D000041 ORTHO05D006140 2.9e-11 75.1 164 28.0
BcaC07g41312 Brassica carinata HOM05D000041 ORTHO05D006140 2.9e-11 75.1 168 29.8
ClCG06G016000 Citrullus lanatus HOM05D000041 ORTHO05D006140 2.9e-11 75.1 296 27.0
TWI81G0058 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 2.9e-11 75.1 184 28.8
Cc04_g14400 Coffea canephora HOM05D000041 ORTHO05D006140 3.9e-11 74.7 154 30.5
Lj1g0011184 Lotus japonicus HOM05D000041 ORTHO05D006140 3.9e-11 74.7 154 30.5
Lalb_Chr11g0071711 Lupinus albus HOM05D000041 ORTHO05D006140 3.9e-11 74.7 154 31.2
Phvul.009G185000 Phaseolus vulgaris HOM05D000041 ORTHO05D006140 3.9e-11 74.7 153 32.0
Solyc03g115720.3 Solanum lycopersicum HOM05D000041 ORTHO05D006140 3.9e-11 74.7 178 29.8
Sopen03g034700 Solanum pennellii HOM05D000041 ORTHO05D006140 3.9e-11 74.7 178 29.8
MSTRG.23000 Avicennia marina HOM05D000041 ORTHO05D006140 6.6e-11 73.9 153 30.1
Manes.14G081900 Manihot esculenta HOM05D000041 ORTHO05D006140 6.6e-11 73.9 165 28.5
Psat5g199640 Pisum sativum HOM05D000041 ORTHO05D006140 8.6e-11 73.6 154 30.5
Potri.012G068100 Populus trichocarpa HOM05D000041 ORTHO05D006140 8.6e-11 73.6 157 28.0
CsaV3_1G002560 Cucumis sativus L. HOM05D000041 ORTHO05D006140 1.1e-10 73.2 285 24.6
Peaxi162Scf00274g00349 Petunia axillaris HOM05D000041 ORTHO05D006140 1.1e-10 73.2 153 29.4
Cre17.g716850 Chlamydomonas reinhardtii HOM05D000041 ORTHO05D006140 1.5e-10 72.8 180 30.6
CAN.G479.58 Capsicum annuum HOM05D000041 ORTHO05D006140 1.9e-10 72.4 181 28.2
MELO3C017192.2 Cucumis melo HOM05D000041 ORTHO05D006140 1.9e-10 72.4 285 24.6
QL10p017885 Quercus lobata HOM05D000041 ORTHO05D006140 1.9e-10 72.4 157 28.7
Thecc.03G094500 Theobroma cacao HOM05D000041 ORTHO05D006140 5.6e-10 70.9 157 29.3
Glyma.04G165900 Glycine max HOM05D000041 ORTHO05D006140 9.5e-10 70.1 153 29.4
GSVIVG01007961001 Vitis vinifera HOM05D000041 ORTHO05D006140 9.5e-10 70.1 357 23.8
vmacro16523 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 6.1e-09 67.4 174 25.9
AUR62008466 Chenopodium quinoa HOM05D000041 ORTHO05D006140 8.0e-09 67.0 151 27.8
PGR083G0939 Punica granatum HOM05D000041 ORTHO05D006140 1.0e-08 66.6 184 28.8
Cfa026163 Carpinus fangiana HOM05D000041 ORTHO05D006140 1.8e-08 65.9 152 30.3
COL.COLO4_36953 Corchorus olitorius HOM05D000041 ORTHO05D006140 2.0e-07 62.4 149 29.5
SGA_v2.0_scaffold313G48328 Striga asiatica HOM05D000041 ORTHO05D006140 2.6e-07 62.0 140 29.3
MBI16_g06793_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D006140 3.4e-07 61.6 150 29.3
Migut.I00214 Erythranthe guttata HOM05D000041 ORTHO05D006140 7.5e-07 60.5 140 28.6
AUR62021627 Chenopodium quinoa HOM05D000041 ORTHO05D006140 1.3e-06 59.7 154 28.6


User provided reference genes

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