Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 1.9e-122 442.6 233 100.0
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 3.2e-21 106.3 194 35.1
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 9.4e-21 104.8 216 31.5
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 9.4e-21 104.8 195 32.3
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 9.4e-21 104.8 195 32.3
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.6e-20 102.8 194 32.0
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 3.6e-20 102.8 194 32.0
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 4.7e-20 102.4 194 33.0
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 8.0e-20 101.7 202 31.2
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 8.0e-20 101.7 194 33.0
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.0e-19 101.3 214 30.8
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.8e-19 100.5 194 31.4
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 2.3e-19 100.1 194 32.0
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.9e-19 99.4 194 31.4
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 5.2e-19 99.0 194 31.4
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 6.7e-19 98.6 195 32.8
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 8.8e-19 98.2 194 32.5
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 8.8e-19 98.2 214 31.3
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 8.8e-19 98.2 226 29.2
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 1.5e-18 97.4 214 30.8
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 1.5e-18 97.4 214 30.8
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.5e-18 97.4 194 30.9
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 2.0e-18 97.1 194 31.4
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 2.0e-18 97.1 198 32.3
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.3e-18 96.3 194 31.4
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 3.3e-18 96.3 194 30.4
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 4.4e-18 95.9 214 28.5
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 4.4e-18 95.9 194 30.9
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 5.7e-18 95.5 195 30.8
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 5.7e-18 95.5 194 30.9
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 7.4e-18 95.1 194 30.4
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 9.7e-18 94.7 194 31.4
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 9.7e-18 94.7 194 31.4
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.3e-17 94.4 195 32.8
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.3e-17 94.4 195 30.8
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.3e-17 94.4 194 30.4
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.7e-17 94.0 195 32.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.7e-17 94.0 195 30.8
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 1.7e-17 94.0 221 29.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 1.7e-17 94.0 195 32.3
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.7e-17 94.0 194 30.4
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 2.2e-17 93.6 201 30.3
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 2.8e-17 93.2 194 29.9
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 3.7e-17 92.8 194 30.9
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.8e-17 92.4 198 30.3
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 4.8e-17 92.4 214 29.9
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 6.3e-17 92.0 194 30.4
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 8.2e-17 91.7 194 29.9
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 8.2e-17 91.7 194 29.4
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.4e-16 90.9 200 29.0
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 1.4e-16 90.9 195 32.3
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 1.4e-16 90.9 197 28.9
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.4e-16 90.1 206 29.1
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 3.1e-16 89.7 200 27.5
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.1e-16 89.7 200 28.5
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 4.1e-16 89.4 208 29.3
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 5.3e-16 89.0 194 29.9
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 5.3e-16 89.0 197 28.4
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 7.0e-16 88.6 194 29.9
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 7.0e-16 88.6 214 28.0
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 7.0e-16 88.6 186 31.2
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 9.1e-16 88.2 201 31.3
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 9.1e-16 88.2 186 30.6
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.2e-15 87.8 194 30.4
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.6e-15 87.4 197 29.9
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 1.6e-15 87.4 186 30.6
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 2.0e-15 87.0 194 29.9
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 2.6e-15 86.7 200 27.5
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.5e-15 85.9 198 29.3
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 4.5e-15 85.9 188 30.3
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.9e-15 85.5 198 29.3
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 7.7e-15 85.1 200 27.5
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.3e-14 84.3 183 30.1
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.9e-14 83.2 200 26.5
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 3.8e-14 82.8 200 27.0
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 5.0e-14 82.4 184 32.1
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 6.5e-14 82.0 200 27.0
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 8.5e-14 81.6 200 26.5
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 8.5e-14 81.6 216 26.9
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 1.1e-13 81.3 200 27.0
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.1e-13 81.3 193 29.5
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.1e-13 81.3 196 31.1
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 1.5e-13 80.9 200 27.0
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 1.5e-13 80.9 193 29.5
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.5e-13 80.9 217 29.5
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.9e-13 80.5 181 29.8
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 1.9e-13 80.5 227 26.9
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 9.4e-13 78.2 200 26.5
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-12 77.8 200 26.5
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.2e-12 77.8 200 26.5
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.1e-12 77.0 200 26.5
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.6e-12 76.3 214 27.1
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 3.6e-12 76.3 194 26.8
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 4.7e-12 75.9 200 26.0
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 4.7e-12 75.9 200 26.0
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 4.7e-12 75.9 200 26.0
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 6.1e-12 75.5 186 28.5
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 8.0e-12 75.1 200 26.0
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.4e-11 74.3 200 26.0
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.4e-11 74.3 206 27.7
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 2.3e-11 73.6 194 27.3
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 4.0e-11 72.8 189 25.9
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 4.4e-10 69.3 200 26.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 5.7e-10 68.9 177 28.8
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 9.1e-08 61.6 200 23.5
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 3.5e-07 59.7 197 25.4
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 3.5e-07 59.7 197 25.9
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 3.5e-07 59.7 197 25.9


User provided reference genes

Program Settings