Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO06G092 Micromonas commoda HOM05D006654 ORTHO05D008201 1.8e-179 632.5 320 100.0
TWI23G1026 Tripterygium wilfordii HOM05D006654 ORTHO05D008201 2.3e-49 200.3 237 48.9
Os07g0295200 Oryza sativa ssp. japonica HOM05D006654 ORTHO05D008201 2.9e-49 199.9 237 49.4
Actinidia08864 Actinidia chinensis HOM05D006654 ORTHO05D008201 5.0e-49 199.1 237 48.9
EL10As4g23406 Beta vulgaris HOM05D006654 ORTHO05D008201 5.0e-49 199.1 232 50.4
CiPaw.12G042200 Carya illinoinensis HOM05D006654 ORTHO05D008201 5.0e-49 199.1 237 49.4
ClCG03G003720 Citrullus lanatus HOM05D006654 ORTHO05D008201 5.0e-49 199.1 237 48.9
CsaV3_1G009610 Cucumis sativus L. HOM05D006654 ORTHO05D008201 5.0e-49 199.1 237 48.9
THA.LOC104818189 Tarenaya hassleriana HOM05D006654 ORTHO05D008201 5.0e-49 199.1 232 49.1
Haze_07229 Corylus avellana HOM05D006654 ORTHO05D008201 6.6e-49 198.7 237 49.8
MBI07_g34629_MAGBIO Magnolia biondii HOM05D006654 ORTHO05D008201 6.6e-49 198.7 237 48.9
PSO063G4350 Papaver somniferum HOM05D006654 ORTHO05D008201 8.6e-49 198.4 237 48.1
PSO782G1240 Papaver somniferum HOM05D006654 ORTHO05D008201 8.6e-49 198.4 237 48.1
Rhsim12G0173900 Rhododendron simsii HOM05D006654 ORTHO05D008201 8.6e-49 198.4 237 49.4
AUR62029635 Chenopodium quinoa HOM05D006654 ORTHO05D008201 1.5e-48 197.6 237 49.4
TAR371G0211 Trochodendron aralioides HOM05D006654 ORTHO05D008201 1.5e-48 197.6 237 48.5
GSVIVG01008527001 Vitis vinifera HOM05D006654 ORTHO05D008201 1.5e-48 197.6 237 49.4
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 1.9e-48 197.2 237 48.9
Manes.06G118600 Manihot esculenta HOM05D006654 ORTHO05D008201 1.9e-48 197.2 237 48.9
Aa31LG1G18600 Aethionema arabicum HOM05D006654 ORTHO05D008201 2.5e-48 196.8 237 47.7
Thhalv10004858m.g Eutrema salsugineum HOM05D006654 ORTHO05D008201 2.5e-48 196.8 232 47.8
Hma1.2p1_0014F.1_g009560 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 2.5e-48 196.8 237 48.5
Manes.14G052100 Manihot esculenta HOM05D006654 ORTHO05D008201 2.5e-48 196.8 237 48.5
BcaC01g02588 Brassica carinata HOM05D006654 ORTHO05D008201 3.3e-48 196.4 232 48.3
Gorai.003G121200 Gossypium raimondii HOM05D006654 ORTHO05D008201 4.3e-48 196.1 237 48.1
Thecc.03G127500 Theobroma cacao HOM05D006654 ORTHO05D008201 4.3e-48 196.1 237 48.1
CANSAT80G1342 Cannabis sativa HOM05D006654 ORTHO05D008201 5.6e-48 195.7 237 47.7
Carub.0008s2414 Capsella rubella HOM05D006654 ORTHO05D008201 5.6e-48 195.7 232 47.8
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 5.6e-48 195.7 232 48.7
Aqoxy5G03402 Aquilegia oxysepala HOM05D006654 ORTHO05D008201 7.3e-48 195.3 237 48.1
Nn4g22349 Nelumbo nucifera HOM05D006654 ORTHO05D008201 7.3e-48 195.3 237 48.5
Sc10g0010430 Simmondsia chinensis HOM05D006654 ORTHO05D008201 7.3e-48 195.3 237 48.5
AL8G40500 Arabidopsis lyrata HOM05D006654 ORTHO05D008201 9.5e-48 194.9 232 47.8
Oeu023486.1 Olea europaea HOM05D006654 ORTHO05D008201 9.5e-48 194.9 232 47.4
QL10p003811 Quercus lobata HOM05D006654 ORTHO05D008201 9.5e-48 194.9 237 48.5
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 1.2e-47 194.5 237 47.3
ECA232G0809 Erigeron canadensis HOM05D006654 ORTHO05D008201 1.6e-47 194.1 237 48.9
Migut.I00498 Erythranthe guttata HOM05D006654 ORTHO05D008201 1.6e-47 194.1 232 47.8
Mapoly0061s0139 Marchantia polymorpha HOM05D006654 ORTHO05D008201 1.6e-47 194.1 232 48.7
AT5G63440 Arabidopsis thaliana HOM05D006654 ORTHO05D008201 2.8e-47 193.4 232 47.4
Sp2g26520 Schrenkiella parvula HOM05D006654 ORTHO05D008201 2.8e-47 193.4 232 47.4
Ca_11428_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 3.6e-47 193.0 237 47.3
Cc04_g10050 Coffea canephora HOM05D006654 ORTHO05D008201 3.6e-47 193.0 232 48.7
arahy.Tifrunner.gnm1.ann1.S79YT6 Arachis hypogaea HOM05D006654 ORTHO05D008201 4.7e-47 192.6 237 46.8
Nitab4.5_0004750g0080 Nicotiana tabacum HOM05D006654 ORTHO05D008201 4.7e-47 192.6 232 47.8
CAN.G352.15 Capsicum annuum HOM05D006654 ORTHO05D008201 6.1e-47 192.2 232 47.8
Glyma.20G249100 Glycine max HOM05D006654 ORTHO05D008201 8.0e-47 191.8 237 47.7
HPP92_000346 Vanilla planifolia HOM05D006654 ORTHO05D008201 8.0e-47 191.8 237 47.3
CARHR277290 Cardamine hirsuta HOM05D006654 ORTHO05D008201 1.0e-46 191.4 232 47.0
FAN03G1885 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.0e-46 191.4 237 47.7
PGSC0003DMG402015240 Solanum tuberosum HOM05D006654 ORTHO05D008201 1.0e-46 191.4 232 47.4
TPR.G39480 Trifolium pratense HOM05D006654 ORTHO05D008201 1.4e-46 191.0 237 46.4
Nitab4.5_0003282g0120 Nicotiana tabacum HOM05D006654 ORTHO05D008201 1.8e-46 190.7 232 47.4
Potri.012G096500 Populus trichocarpa HOM05D006654 ORTHO05D008201 1.8e-46 190.7 237 48.1
Eucgr.F01379 Eucalyptus grandis HOM05D006654 ORTHO05D008201 2.3e-46 190.3 237 47.7
FAN10G2487 Fragaria x ananassa HOM05D006654 ORTHO05D008201 2.3e-46 190.3 237 47.3
CDE05G1175 Ceratophyllum demersum HOM05D006654 ORTHO05D008201 3.0e-46 189.9 237 46.8
FAN01G0962 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.0e-46 189.9 237 47.3
FAN06G4528 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.0e-46 189.9 237 47.3
RcHm_v2.0_Chr1g0314831 Rosa chinensis HOM05D006654 ORTHO05D008201 3.0e-46 189.9 237 47.3
Solyc03g111330.4 Solanum lycopersicum HOM05D006654 ORTHO05D008201 3.0e-46 189.9 233 47.6
Lsat_1_v5_gn_4_76920 Lactuca sativa HOM05D006654 ORTHO05D008201 4.0e-46 189.5 237 46.4
Pp3c18_15000 Physcomitrium patens HOM05D006654 ORTHO05D008201 4.0e-46 189.5 232 49.6
Phvul.007G001300 Phaseolus vulgaris HOM05D006654 ORTHO05D008201 5.2e-46 189.1 237 47.3
SEGI_01164 Sequoiadendron giganteum HOM05D006654 ORTHO05D008201 6.8e-46 188.7 232 47.8
FvH4_7g00630 Fragaria vesca HOM05D006654 ORTHO05D008201 8.9e-46 188.3 237 46.8
Peaxi162Scf00089g00632 Petunia axillaris HOM05D006654 ORTHO05D008201 8.9e-46 188.3 232 47.0
SMO364G0616 Selaginella moellendorffii HOM05D006654 ORTHO05D008201 1.2e-45 188.0 232 47.0
FAN01G2458 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.5e-45 187.6 237 46.4
MD02G1316100 Malus domestica HOM05D006654 ORTHO05D008201 1.5e-45 187.6 237 46.8
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 1.5e-45 187.6 235 46.4
Pp3c22_11190 Physcomitrium patens HOM05D006654 ORTHO05D008201 2.0e-45 187.2 232 47.8
Pp3c22_11201 Physcomitrium patens HOM05D006654 ORTHO05D008201 2.0e-45 187.2 232 47.8
Potri.015G094300 Populus trichocarpa HOM05D006654 ORTHO05D008201 2.0e-45 187.2 232 48.3
Prupe.4G287600 Prunus persica HOM05D006654 ORTHO05D008201 2.0e-45 187.2 237 46.4
MD07G1005800 Malus domestica HOM05D006654 ORTHO05D008201 3.4e-45 186.4 237 46.4
ATR0561G261 Amborella trichopoda HOM05D006654 ORTHO05D008201 7.5e-45 185.3 229 48.0
Lj5g0001059 Lotus japonicus HOM05D006654 ORTHO05D008201 9.8e-45 184.9 237 44.7
vmacro16672 Vaccinium macrocarpon HOM05D006654 ORTHO05D008201 3.7e-44 183.0 220 50.0
arahy.Tifrunner.gnm1.ann1.653AWM Arachis hypogaea HOM05D006654 ORTHO05D008201 9.2e-43 178.3 220 47.3
Cpa.g.sc13.133 Carica papaya HOM05D006654 ORTHO05D008201 1.2e-42 177.9 220 47.3
VMungo0720G2310 Vigna mungo HOM05D006654 ORTHO05D008201 3.5e-42 176.4 263 43.0
MELO3C002357.2 Cucumis melo HOM05D006654 ORTHO05D008201 2.3e-41 173.7 249 44.6
Duzib068G1280 Durio zibethinus HOM05D006654 ORTHO05D008201 8.6e-41 171.8 238 44.1
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 2.5e-40 170.2 225 46.2
Cre12.g485750 Chlamydomonas reinhardtii HOM05D006654 ORTHO05D008201 2.1e-39 167.2 242 38.8
Oeu044257.1 Olea europaea HOM05D006654 ORTHO05D008201 1.1e-38 164.9 299 37.1
Lalb_Chr06g0164681 Lupinus albus HOM05D006654 ORTHO05D008201 4.0e-38 162.9 230 42.2
Sopen03g030460 Solanum pennellii HOM05D006654 ORTHO05D008201 1.3e-36 157.9 197 45.2
Sed0016483 Sechium edule HOM05D006654 ORTHO05D008201 1.7e-36 157.5 193 48.2
Nn3g16497 Nelumbo nucifera HOM05D006654 ORTHO05D008201 3.7e-36 156.4 203 45.3
Gohir.D03G115000 Gossypium hirsutum HOM05D006654 ORTHO05D008201 6.4e-36 155.6 201 44.8
Atru.BG.190.p Acer truncatum HOM05D006654 ORTHO05D008201 1.4e-35 154.5 232 43.5
COL.COLO4_28092 Corchorus olitorius HOM05D006654 ORTHO05D008201 1.4e-35 154.5 193 46.1
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 2.4e-35 153.7 213 42.3
Gohir.A03G052100 Gossypium hirsutum HOM05D006654 ORTHO05D008201 2.4e-35 153.7 205 44.9
Hma1.2p1_0014F.1_g009570 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 2.4e-35 153.7 197 46.2
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 4.1e-35 152.9 188 46.3
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 4.1e-35 152.9 188 46.3
Ciclev10021838m.g Citrus clementina HOM05D006654 ORTHO05D008201 4.1e-35 152.9 193 46.1
Zm00001eb305410 Zea mays HOM05D006654 ORTHO05D008201 4.1e-35 152.9 198 47.0
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 9.2e-35 151.8 188 45.7
Dinv11162 Davidia involucrata HOM05D006654 ORTHO05D008201 9.2e-35 151.8 208 46.6
Ca_29862_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 1.6e-34 151.0 193 45.6
Prupe.1G190000 Prunus persica HOM05D006654 ORTHO05D008201 6.6e-33 145.6 193 44.6
Sabra15G0115700 Salix brachista HOM05D006654 ORTHO05D008201 1.7e-28 131.0 182 45.1
Lj9A478G90 Lonicera japonica HOM05D006654 ORTHO05D008201 6.4e-28 129.0 191 42.9
AUR62025924 Chenopodium quinoa HOM05D006654 ORTHO05D008201 2.4e-27 127.1 140 47.9
MSTRG.4601 Avicennia marina HOM05D006654 ORTHO05D008201 4.6e-26 122.9 138 46.4
CBR_g21852 Chara braunii HOM05D006654 ORTHO05D008201 6.6e-25 119.0 167 43.7
PRCOL_00005389 Prasinoderma coloniale HOM05D006654 ORTHO05D008201 1.1e-24 118.2 256 32.8
C09p09330 Brassica napus HOM05D006654 ORTHO05D008201 1.5e-24 117.9 141 44.7
BolC9t53845H Brassica oleracea HOM05D006654 ORTHO05D008201 1.5e-24 117.9 141 44.7
Psat6g243960 Pisum sativum HOM05D006654 ORTHO05D008201 2.1e-23 114.0 166 43.4
BcaC04g23328 Brassica carinata HOM05D006654 ORTHO05D008201 3.6e-23 113.2 122 48.4
SalBow1G2859 Salvia bowleyana HOM05D006654 ORTHO05D008201 1.8e-22 110.9 116 47.4
SalBow1G7869 Salvia bowleyana HOM05D006654 ORTHO05D008201 1.8e-22 110.9 116 47.4
Hund10171 Selenicereus undatus HOM05D006654 ORTHO05D008201 9.2e-19 98.6 184 37.0
AagrBONN_evm.TU.Sc2ySwM_228.2755 Anthoceros agrestis HOM05D006654 ORTHO05D008201 3.0e-17 93.6 120 48.3
Prupe.2G008500 Prunus persica HOM05D006654 ORTHO05D008201 1.2e-15 88.2 86 51.2
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 2.4e-11 73.9 113 38.9
CBR_g70955 Chara braunii HOM05D006654 ORTHO05D008201 1.6e-10 71.2 65 56.9
LjContig00075g0008356 Lotus japonicus HOM05D006654 ORTHO05D008201 7.8e-10 68.9 189 30.2
BcaB04g19916 Brassica carinata HOM05D006654 ORTHO05D008201 3.9e-09 66.6 95 38.9
Pp3c19_20620 Physcomitrium patens HOM05D006654 ORTHO05D008201 3.6e-07 60.1 112 36.6


User provided reference genes

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