Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 0.0e+00 1139.4 570 100.0
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 8.2e-103 378.6 541 41.6
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 4.0e-97 359.8 552 38.8
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 2.2e-95 354.0 530 40.9
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 3.4e-88 330.1 559 39.2
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 3.1e-86 323.6 528 38.6
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 1.0e-81 308.5 519 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 5.4e-78 296.2 513 38.0
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 2.3e-73 280.8 534 36.9
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 5.8e-72 276.2 516 35.5
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 7.5e-72 275.8 490 36.7
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 3.9e-68 263.5 528 35.8
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 5.0e-68 263.1 558 34.8
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 5.0e-68 263.1 536 35.4
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 1.1e-67 261.9 577 34.5
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 5.6e-67 259.6 536 35.1
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 1.6e-66 258.1 575 33.9
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 3.1e-65 253.8 519 34.5
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 8.9e-65 252.3 516 32.4
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 2.0e-64 251.1 512 35.0
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 2.6e-64 250.8 511 34.1
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 4.4e-64 250.0 515 32.8
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 2.9e-63 247.3 560 32.5
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 4.9e-63 246.5 542 34.9
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 1.1e-62 245.4 531 32.8
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 1.9e-62 244.6 519 33.7
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 1.9e-62 244.6 545 32.7
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 3.2e-62 243.8 540 32.6
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 3.2e-62 243.8 518 34.2
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 5.4e-62 243.0 542 33.2
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 9.2e-62 242.3 569 32.7
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 1.6e-61 241.5 529 31.9
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 1.6e-61 241.5 526 32.5
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.1e-61 241.1 526 32.5
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 6.0e-61 239.6 561 32.4
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 7.8e-61 239.2 567 31.7
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 1.3e-60 238.4 511 33.1
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 1.3e-60 238.4 567 33.0
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 3.0e-60 237.3 530 33.0
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.5e-59 235.0 572 32.2
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 1.5e-59 235.0 583 32.4
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 5.6e-59 233.0 540 33.5
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 7.3e-59 232.6 501 34.5
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 1.6e-58 231.5 541 32.9
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 3.6e-58 230.3 525 32.0
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 8.1e-58 229.2 377 37.7
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 1.4e-57 228.4 449 34.5
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 3.1e-57 227.3 452 33.6
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 4.0e-57 226.9 614 30.0
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 6.8e-57 226.1 425 34.8
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 1.2e-56 225.3 534 33.1
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 2.6e-56 224.2 559 31.5
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 7.6e-56 222.6 516 31.2
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 2.2e-55 221.1 435 33.8
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.9e-55 220.7 526 31.7
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 1.6e-53 214.9 496 31.9
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 6.0e-53 213.0 550 31.1
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 8.6e-52 209.1 563 30.7
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 9.6e-51 205.7 445 34.2
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 8.1e-50 202.6 618 29.9
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 5.2e-49 199.9 541 30.1
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 6.9e-49 199.5 543 31.1
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 5.8e-48 196.4 463 30.9
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 3.8e-47 193.7 666 28.5
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 4.2e-46 190.3 356 35.1
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 4.8e-34 150.2 268 33.6
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 2.4e-33 147.9 188 42.6
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 9.0e-33 146.0 208 38.0
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 2.0e-32 144.8 311 33.4
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 4.5e-32 143.7 326 34.7
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 3.4e-24 117.5 314 29.3
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 2.2e-18 98.2 212 33.0
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 4.8e-18 97.1 296 27.7
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 6.3e-18 96.7 257 28.8
Nn6g31492 Nelumbo nucifera HOM05D002360 ORTHO05D006971 6.9e-17 93.2 456 25.2
VMungo1383G0373 Vigna mungo HOM05D002182 ORTHO05D008382 9.0e-17 92.8 465 25.6
arahy.Tifrunner.gnm1.ann1.M5MKEZ Arachis hypogaea HOM05D002360 ORTHO05D006971 1.2e-16 92.4 457 25.2
arahy.Tifrunner.gnm1.ann1.TUF7J0 Arachis hypogaea HOM05D002360 ORTHO05D006971 1.2e-16 92.4 457 25.2
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 1.2e-16 92.4 207 30.4
Sopen03g041530 Solanum pennellii HOM05D002360 ORTHO05D006971 1.5e-16 92.0 457 24.5
Glyma.18G003900 Glycine max HOM05D002360 ORTHO05D006971 2.0e-16 91.7 458 25.1
Lalb_Chr11g0075841 Lupinus albus HOM05D002360 ORTHO05D006971 2.0e-16 91.7 458 24.5
MD04G1023800 Malus domestica HOM05D002360 ORTHO05D006971 3.4e-16 90.9 465 25.8
Solyc03g123760.3 Solanum lycopersicum HOM05D002360 ORTHO05D006971 3.4e-16 90.9 457 24.3
CANSAT78G1063 Cannabis sativa HOM05D002360 ORTHO05D006971 4.5e-16 90.5 456 24.8
Phvul.001G264200 Phaseolus vulgaris HOM05D002360 ORTHO05D006971 4.5e-16 90.5 457 25.2
Prupe.1G174100 Prunus persica HOM05D002360 ORTHO05D006971 4.5e-16 90.5 464 26.1
Migut.I01145 Erythranthe guttata HOM05D002360 ORTHO05D006971 7.6e-16 89.7 458 24.5
THA.LOC104822231 Tarenaya hassleriana HOM05D002360 ORTHO05D006971 1.0e-15 89.4 456 25.0
TAR371G0365 Trochodendron aralioides HOM05D002360 ORTHO05D006971 1.3e-15 89.0 467 24.8
CiPaw.01G111500 Carya illinoinensis HOM05D002360 ORTHO05D006971 1.7e-15 88.6 457 24.5
Eucgr.H02625 Eucalyptus grandis HOM05D002360 ORTHO05D006971 1.7e-15 88.6 457 24.3
Glyma.11G253000 Glycine max HOM05D002360 ORTHO05D006971 1.7e-15 88.6 458 24.7
PGSC0003DMG400009156 Solanum tuberosum HOM05D002360 ORTHO05D006971 1.7e-15 88.6 457 24.3
Lj6g0010237 Lotus japonicus HOM05D002360 ORTHO05D006971 2.9e-15 87.8 457 24.7
SalBow6G3918 Salvia bowleyana HOM05D002360 ORTHO05D006971 2.9e-15 87.8 458 23.8
AT4G14210 Arabidopsis thaliana HOM05D002360 ORTHO05D006971 3.8e-15 87.4 457 24.9
Carub.0007s2818 Capsella rubella HOM05D002360 ORTHO05D006971 3.8e-15 87.4 456 24.6
Lalb_Chr23g0278241 Lupinus albus HOM05D002360 ORTHO05D006971 3.8e-15 87.4 456 24.1
AL7G42150 Arabidopsis lyrata HOM05D002360 ORTHO05D006971 5.0e-15 87.0 456 24.6
Lj9A539T91 Lonicera japonica HOM05D002360 ORTHO05D006971 5.0e-15 87.0 458 24.2
BcaC02g09347 Brassica carinata HOM05D002360 ORTHO05D006971 6.5e-15 86.7 457 24.3
BolC4t25740H Brassica oleracea HOM05D002360 ORTHO05D006971 6.5e-15 86.7 457 24.3
Thhalv10024795m.g Eutrema salsugineum HOM05D002360 ORTHO05D006971 6.5e-15 86.7 456 24.6
Sp7g12070 Schrenkiella parvula HOM05D002360 ORTHO05D006971 6.5e-15 86.7 456 24.6
CAN.G790.47 Capsicum annuum HOM05D002360 ORTHO05D006971 8.5e-15 86.3 457 23.6
BcaNung05576 Brassica carinata HOM05D002360 ORTHO05D006971 1.1e-14 85.9 456 24.3
CARHR220290 Cardamine hirsuta HOM05D002360 ORTHO05D006971 1.1e-14 85.9 456 24.3
Cc04_g00540 Coffea canephora HOM05D002360 ORTHO05D006971 1.1e-14 85.9 457 23.6
BcaC01g00209 Brassica carinata HOM05D002360 ORTHO05D006971 1.9e-14 85.1 457 24.1
Sed0014208 Sechium edule HOM05D002360 ORTHO05D006971 1.9e-14 85.1 456 24.3
TPR.G18101 Trifolium pratense HOM05D002360 ORTHO05D006971 1.9e-14 85.1 456 24.1
C03p76930 Brassica napus HOM05D002360 ORTHO05D006971 2.5e-14 84.7 457 24.1
Ca_16437_v3 Cicer arietinum L. HOM05D002360 ORTHO05D006971 2.5e-14 84.7 456 24.3
Manes.05G193700 Manihot esculenta HOM05D002360 ORTHO05D006971 2.5e-14 84.7 456 24.8
HPP92_016649 Vanilla planifolia HOM05D002360 ORTHO05D006971 2.5e-14 84.7 457 23.6
A08p24280 Brassica napus HOM05D002360 ORTHO05D006971 3.2e-14 84.3 457 24.1
MELO3C017772.2 Cucumis melo HOM05D002360 ORTHO05D006971 3.2e-14 84.3 456 24.6
Aqoxy7G00909 Aquilegia oxysepala HOM05D002360 ORTHO05D006971 4.2e-14 84.0 468 24.6
ECA232G4402 Erigeron canadensis HOM05D002360 ORTHO05D006971 4.2e-14 84.0 457 23.9
GSVIVG01016650001 Vitis vinifera HOM05D002360 ORTHO05D006971 4.2e-14 84.0 457 23.9
BcaB02g08628 Brassica carinata HOM05D002360 ORTHO05D006971 5.5e-14 83.6 496 23.8
C04p41610 Brassica napus HOM05D002360 ORTHO05D006971 5.5e-14 83.6 457 24.1
Haze_11694 Corylus avellana HOM05D002360 ORTHO05D006971 5.5e-14 83.6 457 23.6
Sabra02G0179300 Salix brachista HOM05D002360 ORTHO05D006971 5.5e-14 83.6 456 24.1
A04p07910 Brassica napus HOM05D002360 ORTHO05D006971 7.2e-14 83.2 458 24.0
CsaV3_4G002690 Cucumis sativus L. HOM05D002360 ORTHO05D006971 7.2e-14 83.2 456 24.3
PGR083G1913 Punica granatum HOM05D002360 ORTHO05D006971 7.2e-14 83.2 457 24.1
Sc15g0000870 Simmondsia chinensis HOM05D002360 ORTHO05D006971 7.2e-14 83.2 458 23.6
BraA04t16480Z Brassica rapa HOM05D002360 ORTHO05D006971 9.3e-14 82.8 458 23.8
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 9.3e-14 82.8 464 24.1
MSTRG.10902 Avicennia marina HOM05D002360 ORTHO05D006971 1.2e-13 82.4 457 23.6
Atru.chr3.1763 Acer truncatum HOM05D002360 ORTHO05D006971 1.6e-13 82.0 456 23.7
BolC3t19948H Brassica oleracea HOM05D002360 ORTHO05D006971 1.6e-13 82.0 462 24.0
HanXRQChr15g0497361 Helianthus annuus HOM05D002360 ORTHO05D006971 2.1e-13 81.6 458 23.6
Nitab4.5_0006338g0050 Nicotiana tabacum HOM05D002360 ORTHO05D006971 2.1e-13 81.6 457 23.9
CSS0045415 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 2.7e-13 81.3 456 23.5
FAN12G1508 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.7e-13 81.3 457 24.5
FAN22G0477 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.7e-13 81.3 458 24.2
PSO135G0985 Papaver somniferum HOM05D002360 ORTHO05D006971 2.7e-13 81.3 456 24.1
Rhsim12G0213700 Rhododendron simsii HOM05D002360 ORTHO05D006971 2.7e-13 81.3 456 23.7
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 2.7e-13 81.3 147 30.6
MCO15G399 Micromonas commoda HOM05D002360 ORTHO05D006971 3.6e-13 80.9 461 25.6
ATR0006G040 Amborella trichopoda HOM05D002360 ORTHO05D006971 6.1e-13 80.1 490 23.9
CSS0024321 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 6.1e-13 80.1 456 23.5
FAN07G1347 Fragaria x ananassa HOM05D002360 ORTHO05D006971 6.1e-13 80.1 457 24.5
Os03g0184000 Oryza sativa ssp. japonica HOM05D002360 ORTHO05D006971 7.9e-13 79.7 457 24.5
Peaxi162Scf00038g02444 Petunia axillaris HOM05D002360 ORTHO05D006971 7.9e-13 79.7 460 23.9
BraA08t34383Z Brassica rapa HOM05D002360 ORTHO05D006971 1.0e-12 79.3 457 24.3
PSO135G0108 Papaver somniferum HOM05D002360 ORTHO05D006971 1.0e-12 79.3 456 23.5
TWI63G1808 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 1.0e-12 79.3 457 24.3
Potri.014G148700 Populus trichocarpa HOM05D002360 ORTHO05D006971 1.4e-12 79.0 458 23.1
SEGI_37732 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 6.7e-12 76.6 96 44.8
Actinidia25995 Actinidia chinensis HOM05D002360 ORTHO05D006971 1.5e-11 75.5 456 23.7
TWI38G1596 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 1.5e-11 75.5 457 23.6
Gorai.011G149900 Gossypium raimondii HOM05D002360 ORTHO05D006971 2.5e-11 74.7 467 24.4
Nitab4.5_0004950g0020 Nicotiana tabacum HOM05D002360 ORTHO05D006971 2.5e-11 74.7 479 23.2
AagrBONN_evm.TU.Sc2ySwM_368.2776 Anthoceros agrestis HOM05D002360 ORTHO05D006971 5.7e-11 73.6 458 23.1
Dinv20370 Davidia involucrata HOM05D002360 ORTHO05D006971 1.3e-10 72.4 349 25.5
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 2.2e-10 71.6 130 35.4
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 2.8e-10 71.2 123 36.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.7e-10 70.9 470 23.4
COL.COLO4_35973 Corchorus olitorius HOM05D002360 ORTHO05D006971 6.3e-10 70.1 336 25.3
PRCOL_00001058 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 2.4e-09 68.2 481 24.1
EL10Ac7g18238 Beta vulgaris HOM05D002360 ORTHO05D006971 3.1e-09 67.8 463 22.5
RcHm_v2.0_Chr4g0411571 Rosa chinensis HOM05D002360 ORTHO05D006971 3.1e-09 67.8 348 25.6
MBI19_g32880_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006971 4.1e-09 67.4 336 25.0
Thecc.04G190000 Theobroma cacao HOM05D002360 ORTHO05D006971 4.1e-09 67.4 337 25.2
Medtr3g084830 Medicago truncatula HOM05D002360 ORTHO05D006971 6.9e-09 66.6 194 29.4
AUR62001382 Chenopodium quinoa HOM05D002360 ORTHO05D006971 1.2e-08 65.9 195 28.7
AUR62025597 Chenopodium quinoa HOM05D002360 ORTHO05D006971 1.2e-08 65.9 195 28.7
Ah.15g094770 Amaranthus hybridus HOM05D002360 ORTHO05D006971 4.5e-08 63.9 195 28.7
Cfa008674 Carpinus fangiana HOM05D002360 ORTHO05D006971 5.9e-08 63.5 194 28.4
Duzib151G1143 Durio zibethinus HOM05D002360 ORTHO05D006971 5.9e-08 63.5 337 24.6
Gohir.A10G132000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 5.9e-08 63.5 347 25.1
Gohir.D10G135000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 5.9e-08 63.5 347 24.8
Ciclev10007114m.g Citrus clementina HOM05D002360 ORTHO05D006971 1.7e-07 62.0 194 28.9
Zm00001eb006300 Zea mays HOM05D002360 ORTHO05D006971 1.1e-06 59.3 337 24.9


User provided reference genes

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