Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 0.0e+00 1134.4 592 100.0
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.7e-21 108.6 358 26.8
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 5.0e-18 97.1 359 27.3
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.4e-17 95.5 358 28.2
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.6e-16 92.0 312 26.6
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 2.1e-16 91.7 360 25.8
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 4.7e-16 90.5 355 26.2
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 4.7e-16 90.5 376 26.9
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 4.7e-16 90.5 354 26.6
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.0e-15 89.4 358 26.3
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.0e-15 89.4 362 26.0
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 1.0e-15 89.4 241 29.0
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 1.8e-15 88.6 370 25.9
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.8e-15 88.6 357 26.9
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 2.3e-15 88.2 359 27.0
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.3e-15 88.2 359 26.5
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 5.1e-15 87.0 348 25.9
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 6.7e-15 86.7 368 27.4
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 8.8e-15 86.3 375 26.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.5e-14 85.5 301 26.6
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.5e-14 85.5 357 26.3
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.5e-14 85.5 357 26.3
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.6e-14 84.7 358 26.0
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-14 84.3 371 27.8
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 5.7e-14 83.6 357 25.5
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 7.4e-14 83.2 355 26.2
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 9.7e-14 82.8 357 26.6
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 9.7e-14 82.8 300 31.0
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.3e-13 82.4 357 26.3
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.3e-13 82.4 375 27.2
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 1.7e-13 82.0 371 29.1
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.7e-13 82.0 374 25.9
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 2.2e-13 81.6 361 26.6
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 2.2e-13 81.6 370 25.1
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.2e-13 81.6 357 26.6
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.8e-13 81.3 297 26.3
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.7e-13 80.9 390 24.6
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 4.8e-13 80.5 359 25.6
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.3e-13 80.1 298 26.8
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 6.3e-13 80.1 377 27.3
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 8.2e-13 79.7 362 28.5
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.1e-12 79.3 364 27.2
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 1.8e-12 78.6 356 25.0
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.8e-12 78.6 376 23.7
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 3.1e-12 77.8 298 27.5
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 9.1e-12 76.3 360 25.3
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 1.2e-11 75.9 354 24.3
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.6e-11 75.5 368 26.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.6e-11 75.5 245 27.8
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 2.0e-11 75.1 367 27.2
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 2.0e-11 75.1 369 24.9
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.0e-11 75.1 360 25.6
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 2.6e-11 74.7 355 24.8
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 4.5e-11 73.9 362 26.5
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 5.9e-11 73.6 368 26.6
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 5.9e-11 73.6 357 23.5
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 7.7e-11 73.2 190 28.4
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 1.0e-10 72.8 355 23.7
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.7e-10 72.0 362 26.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.7e-10 72.0 366 24.9
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.2e-10 71.6 423 23.9
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 2.9e-10 71.2 354 24.3
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 5.0e-10 70.5 304 25.7
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 1.1e-09 69.3 312 26.0
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.5e-09 68.9 450 25.8
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 3.2e-09 67.8 184 28.3
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 3.2e-09 67.8 355 23.1
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 5.5e-09 67.0 190 27.9
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 9.4e-09 66.2 356 26.1
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 8.0e-08 63.2 365 24.7
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.0e-07 62.8 247 26.7
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.8e-07 62.0 418 23.7
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 2.3e-07 61.6 356 23.3
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 4.0e-07 60.8 294 25.9
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 8.8e-07 59.7 232 26.7
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.1e-06 59.3 399 24.3
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.1e-06 59.3 153 27.5
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 3.3e-06 57.8 392 23.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 7.5e-06 56.6 483 23.6


User provided reference genes

Program Settings