Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G338 Micromonas commoda HOM05D006432 ORTHO05D008257 4.6e-109 397.9 200 100.0
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 3.5e-24 115.9 211 40.8
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 1.7e-23 113.6 206 39.8
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 6.6e-23 111.7 205 37.6
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 1.1e-22 110.9 205 37.6
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 1.9e-22 110.2 205 37.6
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 2.5e-22 109.8 205 39.0
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 4.3e-22 109.0 207 37.7
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 5.6e-22 108.6 207 37.7
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 7.3e-22 108.2 205 37.6
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 7.3e-22 108.2 205 36.6
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 9.5e-22 107.8 198 38.4
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 9.5e-22 107.8 205 38.0
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 1.2e-21 107.5 205 37.6
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 2.1e-21 106.7 207 37.2
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 2.1e-21 106.7 207 36.7
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 2.1e-21 106.7 207 38.2
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 2.8e-21 106.3 198 37.9
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 2.8e-21 106.3 205 37.1
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 2.8e-21 106.3 207 38.2
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 2.8e-21 106.3 207 37.7
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 2.8e-21 106.3 206 37.9
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 3.6e-21 105.9 200 39.5
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 3.6e-21 105.9 205 37.1
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 3.6e-21 105.9 202 37.1
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 3.6e-21 105.9 202 37.6
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 3.6e-21 105.9 201 37.3
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 4.7e-21 105.5 198 36.9
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 4.7e-21 105.5 207 36.2
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 4.7e-21 105.5 208 37.0
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 4.7e-21 105.5 207 38.2
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 6.2e-21 105.1 207 37.7
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 6.2e-21 105.1 211 37.9
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 8.1e-21 104.8 207 37.7
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 1.1e-20 104.4 207 37.2
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 1.1e-20 104.4 209 36.8
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 1.1e-20 104.4 207 36.2
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 1.1e-20 104.4 205 35.6
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 1.1e-20 104.4 208 36.1
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 1.1e-20 104.4 205 34.1
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 1.4e-20 104.0 210 37.6
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 1.4e-20 104.0 205 37.1
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 1.4e-20 104.0 210 37.6
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 1.8e-20 103.6 207 37.2
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 1.8e-20 103.6 205 36.1
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 1.8e-20 103.6 207 35.7
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 1.8e-20 103.6 208 37.5
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 37.1
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 36.6
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 2.3e-20 103.2 209 37.3
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 35.6
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 37.1
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 34.1
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 2.3e-20 103.2 205 35.6
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 3.1e-20 102.8 209 36.8
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 3.1e-20 102.8 209 36.8
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 3.1e-20 102.8 210 37.1
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 3.1e-20 102.8 209 36.4
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 4.0e-20 102.4 208 36.5
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 4.0e-20 102.4 207 36.7
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 5.2e-20 102.1 205 36.6
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 5.2e-20 102.1 205 36.1
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 5.2e-20 102.1 208 36.5
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 5.2e-20 102.1 205 35.1
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 5.2e-20 102.1 205 35.1
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 5.2e-20 102.1 205 34.1
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 5.2e-20 102.1 207 38.2
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 1.2e-19 100.9 205 35.6
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 1.2e-19 100.9 207 36.2
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 1.5e-19 100.5 207 36.7
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 1.5e-19 100.5 207 37.2
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 2.0e-19 100.1 203 37.4
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 2.0e-19 100.1 205 37.1
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 2.0e-19 100.1 207 36.2
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 2.0e-19 100.1 205 36.1
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 2.0e-19 100.1 205 36.1
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 2.6e-19 99.8 205 37.6
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 2.6e-19 99.8 205 35.1
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 2.6e-19 99.8 209 35.4
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 3.4e-19 99.4 205 37.6
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 3.4e-19 99.4 209 37.8
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 4.4e-19 99.0 205 37.6
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 4.4e-19 99.0 208 36.5
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 4.4e-19 99.0 205 34.6
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 4.4e-19 99.0 207 36.7
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 5.8e-19 98.6 205 35.1
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 1.3e-18 97.4 213 34.7
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 1.3e-18 97.4 205 35.1
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 1.3e-18 97.4 203 36.0
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 1.3e-18 97.4 205 34.6
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 3.7e-18 95.9 205 35.6
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 4.9e-18 95.5 207 33.8
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 6.4e-18 95.1 205 36.1
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 8.3e-18 94.7 207 36.2
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 4.1e-17 92.4 200 34.5
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 4.1e-17 92.4 205 35.1
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 1.6e-16 90.5 204 33.3
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 1.2e-13 80.9 201 32.8
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 4.7e-13 79.0 156 37.2
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 8.1e-13 78.2 215 33.5
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 3.4e-11 72.8 201 30.3
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 6.4e-10 68.6 148 33.8
PRCOL_00002195 Prasinoderma coloniale HOM05D006432 ORTHO05D008257 6.4e-10 68.6 122 40.2
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea HOM05D006432 ORTHO05D008257 3.2e-09 66.2 116 37.1
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea HOM05D006432 ORTHO05D008257 4.1e-09 65.9 116 36.2
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 5.4e-09 65.5 145 33.1
SGA_v2.0_scaffold43G16214 Striga asiatica HOM05D006432 ORTHO05D008257 5.4e-09 65.5 118 39.0
CDE03G0089 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 3.5e-08 62.8 116 35.3
Cpa.g.sc44.36 Carica papaya HOM05D006432 ORTHO05D008257 4.6e-08 62.4 116 37.9
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 1.3e-07 60.8 112 35.7
AagrBONN_evm.TU.Sc2ySwM_369.590 Anthoceros agrestis HOM05D002234 ORTHO05D002254 8.7e-07 58.2 229 27.1
PRCOL_00003721 Prasinoderma coloniale HOM05D003483 ORTHO05D002254 1.9e-06 57.0 199 28.6
BcaC09g51148 Brassica carinata HOM05D002234 ORTHO05D002254 2.5e-06 56.6 234 28.2
C01p16500 Brassica napus HOM05D002234 ORTHO05D002254 2.5e-06 56.6 234 28.2
BolC1t01599H Brassica oleracea HOM05D002234 ORTHO05D002254 2.5e-06 56.6 234 28.2
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 2.5e-06 56.6 228 28.5
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 4.3e-06 55.8 194 25.8
A01p13620 Brassica napus HOM05D002234 ORTHO05D002254 5.6e-06 55.5 234 27.8
BraA01t01304Z Brassica rapa HOM05D002234 ORTHO05D002254 5.6e-06 55.5 234 27.8
Potri.004G003200 Populus trichocarpa HOM05D002234 ORTHO05D002254 7.3e-06 55.1 231 26.8


User provided reference genes

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