Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 5.7e-73 277.7 163 100.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 5.2e-26 121.7 164 44.5
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.6e-25 119.4 167 44.9
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 2.6e-25 119.4 166 44.0
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 3.4e-25 119.0 166 45.2
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 3.4e-25 119.0 166 45.2
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 9.8e-25 117.5 165 43.6
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-24 117.1 166 44.6
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-24 117.1 166 44.6
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.3e-24 117.1 166 44.6
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 1.3e-24 117.1 166 44.0
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.7e-24 116.7 166 44.6
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.7e-24 116.7 166 44.6
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.7e-24 116.7 166 44.6
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.7e-24 116.7 164 42.7
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.2e-24 116.3 166 44.6
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 2.2e-24 116.3 169 43.2
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 2.2e-24 116.3 164 42.7
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.2e-24 116.3 165 43.0
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 2.8e-24 115.9 166 44.6
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.8e-24 115.9 144 45.1
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 2.8e-24 115.9 165 43.0
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 3.7e-24 115.5 164 43.9
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 3.7e-24 115.5 164 42.7
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 4.9e-24 115.2 164 43.3
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 4.9e-24 115.2 164 42.1
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 4.9e-24 115.2 165 43.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 6.3e-24 114.8 165 45.5
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 6.3e-24 114.8 167 43.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 8.3e-24 114.4 165 41.8
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-23 114.0 166 44.0
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.1e-23 114.0 165 41.8
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.1e-23 114.0 165 41.8
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 1.1e-23 114.0 165 41.8
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.4e-23 113.6 166 42.8
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.4e-23 113.6 164 41.5
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.4e-23 113.6 165 43.6
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.4e-23 113.6 165 47.3
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.8e-23 113.2 164 42.7
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 1.8e-23 113.2 165 40.6
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.8e-23 113.2 164 42.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.8e-23 113.2 164 41.5
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 2.4e-23 112.8 166 44.0
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 2.4e-23 112.8 164 41.5
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 2.4e-23 112.8 163 43.6
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 3.2e-23 112.5 165 43.0
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 3.2e-23 112.5 165 43.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 3.2e-23 112.5 164 42.7
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 40.9
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 43.3
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 43.3
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 43.3
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 43.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 4.1e-23 112.1 164 40.9
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 5.4e-23 111.7 166 43.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 5.4e-23 111.7 174 40.8
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 5.4e-23 111.7 165 41.8
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 5.4e-23 111.7 164 43.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 7.0e-23 111.3 165 41.8
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 9.2e-23 110.9 164 42.7
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 9.2e-23 110.9 165 45.5
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.2e-22 110.5 167 44.3
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.2e-22 110.5 164 42.1
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.2e-22 110.5 165 41.8
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.2e-22 110.5 167 43.1
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.6e-22 110.2 165 41.2
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.6e-22 110.2 167 49.1
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.6e-22 110.2 164 45.1
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-22 110.2 165 41.2
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.6e-22 110.2 164 42.7
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.6e-22 110.2 164 42.7
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.0e-22 109.8 164 39.6
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 2.7e-22 109.4 164 42.7
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 3.5e-22 109.0 165 40.0
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 3.5e-22 109.0 167 42.5
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.5e-22 109.0 170 42.4
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.5e-22 109.0 168 41.1
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 4.5e-22 108.6 167 43.1
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 4.5e-22 108.6 165 42.4
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 5.9e-22 108.2 165 41.8
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 5.9e-22 108.2 162 38.9
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 7.8e-22 107.8 139 44.6
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 7.8e-22 107.8 164 39.6
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 7.8e-22 107.8 165 46.7
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 3.9e-21 105.5 162 39.5
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 6.6e-21 104.8 167 46.1
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.6e-21 104.8 164 41.5
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 6.6e-21 104.8 170 38.8
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 8.6e-21 104.4 137 43.8
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 1.5e-20 103.6 96 51.0
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.3e-20 102.4 167 43.1
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 5.6e-20 101.7 168 41.1
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 7.3e-20 101.3 165 39.4
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 9.5e-20 100.9 163 39.9
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.2e-14 84.0 100 40.0
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.3e-13 80.5 162 34.0
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.0e-13 79.3 142 39.4
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 3.0e-13 79.3 142 37.3
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.5e-12 77.0 141 41.8
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.9e-12 76.6 165 34.5
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 4.3e-12 75.5 143 37.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 4.3e-12 75.5 115 40.0
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 7.5e-09 64.7 140 36.4
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 2.9e-08 62.8 144 36.1
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.9e-07 60.1 127 36.2
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 4.1e-07 58.9 133 36.8
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-06 57.0 127 35.4


User provided reference genes

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