Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G183 Micromonas commoda HOM05D005066 ORTHO05D006138 3.0e-213 745.0 385 100.0
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 1.1e-23 115.2 407 27.5
PRCOL_00000380 Prasinoderma coloniale HOM05D005066 ORTHO05D006138 4.1e-21 106.7 374 31.0
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 5.7e-15 86.3 355 23.4
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 1.7e-14 84.7 359 22.6
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 3.7e-14 83.6 365 25.8
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 4.8e-14 83.2 360 25.8
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 4.8e-14 83.2 360 26.1
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 4.8e-14 83.2 359 23.4
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 4.8e-14 83.2 359 24.5
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 4.8e-14 83.2 367 23.4
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 6.3e-14 82.8 355 23.1
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 1.1e-13 82.0 360 25.6
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 1.1e-13 82.0 360 26.1
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 1.1e-13 82.0 360 26.1
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 1.1e-13 82.0 359 26.5
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 1.4e-13 81.6 376 24.2
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 1.8e-13 81.3 370 23.8
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 1.8e-13 81.3 370 23.8
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 1.8e-13 81.3 371 24.8
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 2.4e-13 80.9 367 23.4
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 2.4e-13 80.9 367 24.3
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 2.4e-13 80.9 355 22.8
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 2.4e-13 80.9 360 26.4
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 4.1e-13 80.1 355 22.8
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 5.3e-13 79.7 356 22.5
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 5.3e-13 79.7 359 24.8
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 7.0e-13 79.3 370 25.4
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 7.0e-13 79.3 355 24.2
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 7.0e-13 79.3 359 23.7
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 9.1e-13 79.0 355 23.7
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 9.1e-13 79.0 358 23.5
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.2e-12 78.6 355 24.5
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 1.2e-12 78.6 366 25.1
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 1.2e-12 78.6 370 23.2
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 3.5e-12 77.0 355 23.9
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 3.5e-12 77.0 373 23.3
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 3.5e-12 77.0 358 23.5
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 4.5e-12 76.6 350 24.0
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 4.5e-12 76.6 359 24.0
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 5.9e-12 76.3 359 24.5
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 5.9e-12 76.3 358 23.5
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 5.9e-12 76.3 362 24.0
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 7.7e-12 75.9 369 24.1
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 2.2e-11 74.3 358 26.0
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 2.2e-11 74.3 368 24.5
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 2.2e-11 74.3 367 22.6
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 2.9e-11 73.9 363 24.2
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 2.9e-11 73.9 358 24.3
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 2.9e-11 73.9 361 23.8
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 3.8e-11 73.6 359 24.0
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 3.8e-11 73.6 355 23.7
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 5.0e-11 73.2 363 23.4
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 5.0e-11 73.2 358 23.7
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.1e-10 72.0 370 23.2
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 1.5e-10 71.6 358 23.5
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 1.5e-10 71.6 359 22.6
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 1.5e-10 71.6 371 22.6
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 2.5e-10 70.9 370 23.0
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 3.2e-10 70.5 357 23.5
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 3.2e-10 70.5 370 22.2
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 4.2e-10 70.1 370 21.4
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 5.5e-10 69.7 370 23.0
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 7.2e-10 69.3 352 22.2
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 7.2e-10 69.3 358 23.2
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 7.2e-10 69.3 371 22.4
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 9.4e-10 68.9 353 23.5
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 9.4e-10 68.9 362 23.5
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 1.2e-09 68.6 370 23.0
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 1.2e-09 68.6 357 24.1
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 1.6e-09 68.2 357 21.0
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 1.6e-09 68.2 361 23.8
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 2.1e-09 67.8 359 22.0
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 2.7e-09 67.4 371 22.9
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 3.6e-09 67.0 366 23.8
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 4.7e-09 66.6 358 22.3
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 8.0e-09 65.9 364 23.1
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 1.0e-08 65.5 368 23.6
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 1.0e-08 65.5 358 22.3
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 1.8e-08 64.7 370 21.9
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 2.3e-08 64.3 361 24.4
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 2.3e-08 64.3 271 24.7
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 3.0e-08 63.9 157 29.9
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 5.2e-08 63.2 364 22.3
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 5.2e-08 63.2 180 28.3
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 1.2e-07 62.0 368 22.6
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 1.2e-07 62.0 366 23.2
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 2.0e-07 61.2 363 22.0
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 3.4e-07 60.5 357 21.8
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 9.8e-07 58.9 361 22.7
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 1.3e-06 58.5 376 22.3
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 1.3e-06 58.5 376 22.3
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.7e-06 58.2 144 31.2
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 3.7e-06 57.0 377 24.9


User provided reference genes

Program Settings