Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 6.8e-283 976.9 563 100.0
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.2e-07 61.6 138 34.8
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 2.9e-07 61.2 140 35.7
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 2.9e-07 61.2 122 37.7
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 3.8e-07 60.8 132 34.8
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 4.9e-07 60.5 140 35.7
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 6.4e-07 60.1 140 35.7
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 8.4e-07 59.7 123 34.1
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.1e-06 59.3 124 37.1
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.4e-06 58.9 121 38.8
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.4e-06 58.9 124 35.5
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.4e-06 58.9 139 35.3
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 1.9e-06 58.5 133 33.8
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 1.9e-06 58.5 124 36.3
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 2.4e-06 58.2 121 36.4
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 2.4e-06 58.2 121 37.2
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 2.4e-06 58.2 121 37.2
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 3.2e-06 57.8 121 37.2
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 3.2e-06 57.8 124 36.3
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 4.2e-06 57.4 139 34.5
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 4.2e-06 57.4 123 38.2
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 4.2e-06 57.4 123 35.0
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 5.4e-06 57.0 135 33.3
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 5.4e-06 57.0 124 35.5
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 5.4e-06 57.0 121 35.5
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 7.1e-06 56.6 122 37.7
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 9.3e-06 56.2 124 35.5
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 9.3e-06 56.2 124 34.7


User provided reference genes

Program Settings