Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G008 Micromonas commoda HOM05D000457 ORTHO05D000560 0.0e+00 1141.3 545 100.0
PRCOL_00003634 Prasinoderma coloniale HOM05D000457 ORTHO05D000560 1.6e-79 301.2 372 40.6
Eucgr.I01139 Eucalyptus grandis HOM05D000457 ORTHO05D000560 4.6e-10 70.5 294 22.8
AT5G50160 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 6.0e-10 70.1 282 23.8
FAN26G2206 Fragaria x ananassa HOM05D000501 ORTHO05D000376 1.3e-09 68.9 322 23.0
FAN26G3176 Fragaria x ananassa HOM05D000501 ORTHO05D000376 1.3e-09 68.9 322 23.0
THA.LOC104800318 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 1.3e-09 68.9 343 22.2
MBI19_g38002_MAGBIO Magnolia biondii HOM05D000501 ORTHO05D000376 1.7e-09 68.6 366 21.9
AagrBONN_evm.TU.Sc2ySwM_117.349 Anthoceros agrestis HOM05D000457 ORTHO05D000560 5.1e-09 67.0 328 22.9
AUR62008153 Chenopodium quinoa HOM05D000457 ORTHO05D000560 8.7e-09 66.2 252 23.4
Phvul.010G101500 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 8.7e-09 66.2 275 22.2
A02p26320 Brassica napus HOM05D000501 ORTHO05D000376 1.1e-08 65.9 244 25.0
BraA02t07633Z Brassica rapa HOM05D000501 ORTHO05D000376 1.1e-08 65.9 244 25.0
ECA246G3664 Erigeron canadensis HOM05D000457 ORTHO05D000560 1.5e-08 65.5 274 23.7
BcaC03g16363 Brassica carinata HOM05D000501 ORTHO05D000376 2.5e-08 64.7 244 24.6
C02p41860 Brassica napus HOM05D000501 ORTHO05D000376 2.5e-08 64.7 244 24.6
Pp3c27_2390 Physcomitrium patens HOM05D000457 ORTHO05D000560 2.5e-08 64.7 268 25.0
BolC2t10212H Brassica oleracea HOM05D000501 ORTHO05D000376 3.3e-08 64.3 244 25.0
AUR62028734 Chenopodium quinoa HOM05D000457 ORTHO05D000560 3.3e-08 64.3 260 22.3
FAN19G1668 Fragaria x ananassa HOM05D000501 ORTHO05D000376 4.3e-08 63.9 309 22.7
Sed0000858 Sechium edule HOM05D000501 ORTHO05D000376 4.3e-08 63.9 352 21.3
HanXRQChr05g0155311 Helianthus annuus HOM05D000457 ORTHO05D000560 5.6e-08 63.5 270 23.7
Mapoly0033s0165 Marchantia polymorpha HOM05D000457 ORTHO05D000560 5.6e-08 63.5 259 22.4
BcaB05g23848 Brassica carinata HOM05D000501 ORTHO05D000376 7.3e-08 63.2 244 23.4
Cc04_g11700 Coffea canephora HOM05D000457 ORTHO05D000560 7.3e-08 63.2 260 23.8
Duzib068G0925 Durio zibethinus HOM05D000457 ORTHO05D000560 7.3e-08 63.2 268 26.1
FAN23G0983 Fragaria x ananassa HOM05D000501 ORTHO05D000376 9.6e-08 62.8 310 22.9
Pp3c16_11510 Physcomitrium patens HOM05D000457 ORTHO05D000560 9.6e-08 62.8 262 25.2
RcHm_v2.0_Chr7g0188251 Rosa chinensis HOM05D000501 ORTHO05D000376 9.6e-08 62.8 333 21.9
Mapoly0093s0090 Marchantia polymorpha HOM05D000457 ORTHO05D000560 1.3e-07 62.4 265 23.0
Thhalv10006725m.g Eutrema salsugineum HOM05D000501 ORTHO05D000376 1.6e-07 62.0 147 26.5
FAN28G0344 Fragaria x ananassa HOM05D000501 ORTHO05D000376 1.6e-07 62.0 310 22.9
FvH4_1g09270 Fragaria vesca HOM05D000501 ORTHO05D000376 2.1e-07 61.6 338 21.0
RcHm_v2.0_Chr7g0218161 Rosa chinensis HOM05D000457 ORTHO05D000560 2.1e-07 61.6 321 21.8
PGR142G3572 Punica granatum HOM05D000457 ORTHO05D000560 2.8e-07 61.2 269 23.0
Cpa.g.sc110.3 Carica papaya HOM05D000457 ORTHO05D000560 3.6e-07 60.8 284 22.9
AUR62025301 Chenopodium quinoa HOM05D000501 ORTHO05D000376 3.6e-07 60.8 146 27.4
AUR62028307 Chenopodium quinoa HOM05D000501 ORTHO05D000376 3.6e-07 60.8 146 27.4
Thhalv10028400m.g Eutrema salsugineum HOM05D000501 ORTHO05D000376 3.6e-07 60.8 332 21.7
Prupe.5G166400 Prunus persica HOM05D000457 ORTHO05D000560 3.6e-07 60.8 261 23.0
RcHm_v2.0_Chr2g0095831 Rosa chinensis HOM05D000501 ORTHO05D000376 3.6e-07 60.8 343 21.9
AUR62032510 Chenopodium quinoa HOM05D000457 ORTHO05D000560 4.8e-07 60.5 294 22.1
Hund14259 Selenicereus undatus HOM05D000501 ORTHO05D000376 4.8e-07 60.5 254 23.6
FAN04G1229 Fragaria x ananassa HOM05D000501 ORTHO05D000376 6.2e-07 60.1 333 21.6
PGR102G1669 Punica granatum HOM05D000457 ORTHO05D000560 6.2e-07 60.1 264 22.3
RcHm_v2.0_Chr7g0202531 Rosa chinensis HOM05D000501 ORTHO05D000376 6.2e-07 60.1 342 22.5
PGR044G2752 Punica granatum HOM05D000457 ORTHO05D000560 8.1e-07 59.7 197 23.9
SMO119G0126 Selaginella moellendorffii HOM05D000457 ORTHO05D000560 8.1e-07 59.7 255 22.0
Medtr8g031070 Medicago truncatula HOM05D000457 ORTHO05D000560 1.1e-06 59.3 252 22.2
Nn4g22619 Nelumbo nucifera HOM05D000457 ORTHO05D000560 1.4e-06 58.9 285 26.0
CARHR255350 Cardamine hirsuta HOM05D000501 ORTHO05D000376 1.8e-06 58.5 332 21.1
Ah.14g084730 Amaranthus hybridus HOM05D000501 ORTHO05D000376 2.4e-06 58.2 146 28.1
Ca_23601_v3 Cicer arietinum L. HOM05D000457 ORTHO05D000560 2.4e-06 58.2 132 26.5
AT1G19230 Arabidopsis thaliana HOM05D000501 ORTHO05D000376 3.1e-06 57.8 147 25.2
Mapoly0193s0015 Marchantia polymorpha HOM05D000457 ORTHO05D000560 3.1e-06 57.8 180 25.0
Aa31LG7G3940 Aethionema arabicum HOM05D000501 ORTHO05D000376 4.0e-06 57.4 339 21.2
AL1G31810 Arabidopsis lyrata HOM05D000501 ORTHO05D000376 4.0e-06 57.4 147 25.9
Carub.0001s1883 Capsella rubella HOM05D000501 ORTHO05D000376 4.0e-06 57.4 147 25.9
CARHR019830 Cardamine hirsuta HOM05D000501 ORTHO05D000376 4.0e-06 57.4 147 25.9
FAN08G1844 Fragaria x ananassa HOM05D000501 ORTHO05D000376 4.0e-06 57.4 333 21.3
THA.LOC104800320 Tarenaya hassleriana HOM05D000501 ORTHO05D000376 4.0e-06 57.4 147 25.2
BolC8t51830H Brassica oleracea HOM05D000501 ORTHO05D000376 5.3e-06 57.0 340 21.5
Sp1g17140 Schrenkiella parvula HOM05D000501 ORTHO05D000376 5.3e-06 57.0 147 25.9
AagrBONN_evm.TU.Sc2ySwM_117.350 Anthoceros agrestis HOM05D000457 ORTHO05D000560 6.9e-06 56.6 298 22.8
EL10Ac8g18991 Beta vulgaris HOM05D000501 ORTHO05D000376 6.9e-06 56.6 145 26.9
BcaB07g31939 Brassica carinata HOM05D000501 ORTHO05D000376 6.9e-06 56.6 137 27.0
Mapoly0046s0097 Marchantia polymorpha HOM05D000501 ORTHO05D000376 6.9e-06 56.6 151 27.8
MELO3C022332.2 Cucumis melo HOM05D000457 ORTHO05D000560 9.0e-06 56.2 252 21.8
Peaxi162Scf00089g01433 Petunia axillaris HOM05D000457 ORTHO05D000560 9.0e-06 56.2 258 22.9
Potri.015G083200 Populus trichocarpa HOM05D000457 ORTHO05D000560 9.0e-06 56.2 259 23.2
Sc14g0000470 Simmondsia chinensis HOM05D000501 ORTHO05D000376 9.0e-06 56.2 133 27.1
VMungo0331G1582 Vigna mungo HOM05D000457 ORTHO05D000560 9.0e-06 56.2 275 20.0


User provided reference genes

Program Settings