Gene: AT1G19230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G19230
- Transcript Identifier AT1G19230.2
- Gene Type Coding gene
- Location Chr1 : 6644189-6649149 : positive
Gene Family Information
- ID HOM05D000501
- #Genes/#Species 1065/98
- Phylogenetic origin
- ID ORTHO05D000376
- #Genes/#Species 1037/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G19230.2
- uniprot O81211
Descriptions
- Description Riboflavin synthase-like superfamily protein
- Computational description Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), FAD-binding 8 (InterPro:IPR013112), EF-HAND 2 (InterPro:IPR018249), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1); Has 2473 Blast hits to 2332 proteins in 402 species: Archae - 8; Bacteria - 385; Metazoa - 719; Fungi - 641; Plants - 520; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink).
- Computational description Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Cytochrome b245, heavy chain (InterPro:IPR000778), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase protein F (TAIR:AT1G64060.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0098869 | IEA | GOA Database | cellular oxidant detoxification | |
| GO:0006952 | TAS | Gene Ontology | defense response | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0050664 | IEA | GOA Database | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | |
| GO:0050664 | IEA | InterPro | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | |
| GO:0004601 | IEA | GOA Database | peroxidase activity | |
| GO:0004601 | IEA | InterPro | peroxidase activity | |
| GO:0005509 | IEA | Gene Ontology | calcium ion binding | |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016174 | IBA | Gene Ontology | NAD(P)H oxidase H2O2-forming activity | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005886 | IBA | Gene Ontology | plasma membrane | 2 |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039261 | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain |
| IPR011992 | EF-hand domain pair |
| IPR017938 | Riboflavin synthase-like beta-barrel |
| IPR013112 | FAD-binding 8 |
| IPR000778 | Cytochrome b245, heavy chain |
| IPR013130 | Ferric reductase transmembrane component-like domain |
| IPR013121 | Ferric reductase, NAD binding domain |
| IPR002048 | EF-hand domain |
| IPR013623 | NADPH oxidase Respiratory burst |
| Mapman id | Description |
|---|---|
| 10.1.1 | Redox homeostasis.controlled reactive oxygen generation.NADPH-oxidase (Rboh) |