Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 2.8e-192 675.2 376 100.0
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 2.6e-97 359.8 262 65.6
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 7.6e-97 358.2 259 65.3
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 7.6e-97 358.2 262 64.9
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 7.6e-97 358.2 260 65.8
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 9.9e-97 357.8 262 66.4
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 1.7e-96 357.1 262 64.9
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 1.7e-96 357.1 262 64.5
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 2.2e-96 356.7 262 64.9
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 2.2e-96 356.7 262 66.4
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 2.2e-96 356.7 262 66.4
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 2.9e-96 356.3 262 66.4
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 3.8e-96 355.9 258 66.3
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 4.9e-96 355.5 262 65.6
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 4.9e-96 355.5 262 64.9
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 6.4e-96 355.1 262 64.9
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 6.4e-96 355.1 262 64.9
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 8.4e-96 354.8 262 64.5
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.4e-95 354.0 262 63.0
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 2.4e-95 353.2 262 64.1
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 2.4e-95 353.2 262 64.9
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 2.4e-95 353.2 262 63.0
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 3.2e-95 352.8 262 64.1
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 3.2e-95 352.8 262 64.5
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 3.2e-95 352.8 262 63.7
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 3.2e-95 352.8 258 65.9
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 3.2e-95 352.8 262 64.5
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 3.2e-95 352.8 262 62.6
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 5.5e-95 352.1 262 64.1
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 5.5e-95 352.1 263 64.3
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 7.1e-95 351.7 258 65.9
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 9.3e-95 351.3 262 63.4
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.2e-94 350.9 262 63.7
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 1.6e-94 350.5 262 63.4
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.1e-94 350.1 263 64.3
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 2.1e-94 350.1 258 64.7
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.7e-94 349.7 263 62.7
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 2.7e-94 349.7 258 65.1
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 3.5e-94 349.4 262 63.4
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 4.6e-94 349.0 258 64.7
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 6.0e-94 348.6 261 64.8
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 6.0e-94 348.6 262 63.7
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 6.0e-94 348.6 262 64.1
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 6.0e-94 348.6 268 63.8
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 7.9e-94 348.2 262 63.4
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 7.9e-94 348.2 262 62.6
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 7.9e-94 348.2 259 64.9
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 1.0e-93 347.8 258 65.1
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 1.0e-93 347.8 299 57.5
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 1.0e-93 347.8 262 63.4
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 1.3e-93 347.4 262 63.4
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 1.3e-93 347.4 258 65.1
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 1.3e-93 347.4 258 65.1
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 1.3e-93 347.4 262 62.6
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 1.8e-93 347.1 262 63.0
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 1.8e-93 347.1 259 63.3
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 2.3e-93 346.7 258 64.7
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 2.3e-93 346.7 262 63.0
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 2.3e-93 346.7 262 63.0
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 2.3e-93 346.7 262 62.2
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 3.0e-93 346.3 262 63.4
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 3.9e-93 345.9 272 61.8
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 5.1e-93 345.5 258 64.7
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 6.7e-93 345.1 262 62.6
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 8.7e-93 344.7 258 64.0
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 8.7e-93 344.7 258 64.0
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 8.7e-93 344.7 258 64.7
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 1.1e-92 344.4 258 64.0
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 1.5e-92 344.0 258 64.0
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 1.5e-92 344.0 258 64.0
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 1.5e-92 344.0 262 63.4
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 1.9e-92 343.6 258 64.0
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 1.9e-92 343.6 259 64.1
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 2.5e-92 343.2 310 57.7
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 3.3e-92 342.8 258 63.6
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 7.4e-92 341.7 258 63.6
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 9.6e-92 341.3 262 62.2
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 1.3e-91 340.9 262 62.6
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 1.3e-91 340.9 262 62.2
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 2.1e-91 340.1 292 58.9
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 2.8e-91 339.7 274 60.2
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 2.8e-91 339.7 268 61.6
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 4.8e-91 339.0 262 61.8
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 4.8e-91 339.0 262 61.8
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 1.8e-90 337.0 259 64.1
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 9.0e-90 334.7 262 62.2
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 9.0e-90 334.7 267 61.4
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 7.6e-89 331.6 262 59.9
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 1.3e-88 330.9 257 61.1
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.3e-88 330.9 262 59.9
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 8.4e-88 328.2 266 59.4
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 1.4e-87 327.4 267 60.3
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 7.1e-87 325.1 248 63.3
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 1.9e-84 317.0 263 61.2
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 2.5e-84 316.6 310 51.3
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 2.5e-79 300.1 259 58.3
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 9.3e-79 298.1 232 61.6
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 1.3e-77 294.3 211 65.9
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 3.9e-77 292.7 223 62.8
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 8.7e-77 291.6 227 61.7
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 5.7e-76 288.9 221 62.4
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 4.1e-74 282.7 198 66.2
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 2.2e-72 276.9 262 55.3
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 5.0e-72 275.8 263 52.5
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 2.5e-68 263.5 244 56.1
FAN05G5024 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.3e-59 232.3 187 60.4
MELO3C014882.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.1e-58 231.5 187 60.4
CARHR148330 Cardamine hirsuta HOM05D005629 ORTHO05D008000 1.7e-56 224.2 182 59.3
FAN02G3075 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.7e-56 224.2 195 57.4
Manes.15G160600 Manihot esculenta HOM05D005629 ORTHO05D008000 1.7e-56 224.2 186 58.1
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 8.5e-56 221.9 145 70.3
FAN14G4117 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.6e-49 201.1 251 45.4
CDE05G1086 Ceratophyllum demersum HOM05D001132 ORTHO05D002510 6.5e-48 195.7 149 63.1
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 1.8e-45 187.6 203 49.3
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 1.0e-40 171.8 277 40.1
Migut.K01251 Erythranthe guttata HOM05D005629 ORTHO05D008000 4.2e-39 166.4 159 54.1
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 1.4e-37 161.4 265 38.5
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 1.4e-37 161.4 230 43.9
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 3.7e-35 153.3 100 72.0
Zm00001eb174780 Zea mays HOM05D005629 ORTHO05D008000 1.4e-34 151.4 170 48.2
Zm00001eb427710 Zea mays HOM05D005629 ORTHO05D003422 1.8e-34 151.0 116 63.8
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 1.0e-32 145.2 116 62.9
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 3.6e-30 136.7 127 55.9
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.3e-24 117.5 70 72.9
FAN14G1519 Fragaria x ananassa HOM05D005629 ORTHO05D022663 1.5e-23 114.8 278 32.0
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis HOM05D005629 ORTHO05D008000 1.2e-22 111.7 335 26.9
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 3.6e-22 110.2 76 67.1
MELO3C032122.2 Cucumis melo HOM05D005629 ORTHO05D008000 4.7e-22 109.8 63 74.6
PRCOL_00005410 Prasinoderma coloniale HOM05D005629 ORTHO05D333266 1.4e-21 108.2 266 30.5
Zm00001eb048250 Zea mays HOM05D005629 ORTHO05D008000 1.4e-18 98.2 70 62.9
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea HOM05D005629 ORTHO05D008000 3.5e-17 93.6 76 57.9
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.6e-16 89.4 110 47.3
A02p35090 Brassica napus HOM05D005629 ORTHO05D008000 4.9e-11 73.2 68 57.4
BraA02t08515Z Brassica rapa HOM05D005629 ORTHO05D008000 4.9e-11 73.2 68 57.4
Lsat_1_v5_gn_0_46360 Lactuca sativa HOM05D005629 ORTHO05D008000 6.0e-09 66.2 69 53.6
CAN.G792.7 Capsicum annuum HOM05D002518 ORTHO05D002630 4.7e-06 56.6 73 45.2


User provided reference genes

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