Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 3.1e-137 491.9 263 100.0
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 3.1e-137 491.9 263 100.0
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.4e-81 307.0 261 62.5
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.9e-78 296.6 263 60.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 9.4e-78 294.3 263 59.3
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 9.4e-78 294.3 260 61.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.0e-76 290.8 263 58.9
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.8e-76 290.0 263 59.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.8e-76 290.0 263 58.9
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 2.3e-76 289.7 263 58.6
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 3.0e-76 289.3 263 58.6
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 4.0e-76 288.9 263 58.2
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 5.2e-76 288.5 263 58.6
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 8.8e-76 287.7 263 57.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.2e-75 287.3 260 58.1
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.6e-75 286.2 263 58.9
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.6e-75 286.2 263 59.3
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 3.4e-75 285.8 263 57.8
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 4.4e-75 285.4 263 57.4
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 7.5e-75 284.6 263 58.9
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.3e-74 283.9 263 57.8
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.7e-74 283.5 263 58.2
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 2.2e-74 283.1 263 57.0
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.8e-74 282.7 263 57.0
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.8e-74 282.7 260 60.0
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 2.8e-74 282.7 263 57.0
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.8e-74 282.7 263 56.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 3.7e-74 282.3 263 58.2
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.7e-74 282.3 258 59.7
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 3.7e-74 282.3 263 57.0
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 4.8e-74 282.0 263 57.4
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.3e-74 281.6 263 58.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 6.3e-74 281.6 263 57.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 8.3e-74 281.2 263 57.0
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 8.3e-74 281.2 263 57.4
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.1e-73 280.8 263 58.9
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.1e-73 280.8 263 58.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.1e-73 280.8 259 58.7
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-73 280.8 259 58.7
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.1e-73 280.8 263 58.2
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.1e-73 280.8 256 60.9
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-73 280.0 259 58.3
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.4e-73 279.6 263 54.8
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 2.4e-73 279.6 263 58.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 2.4e-73 279.6 263 58.2
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 3.1e-73 279.3 263 55.5
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 4.1e-73 278.9 263 55.9
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 5.4e-73 278.5 263 56.3
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.4e-73 278.5 263 56.3
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 7.0e-73 278.1 263 58.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 7.0e-73 278.1 263 57.0
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 9.1e-73 277.7 263 57.0
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 9.1e-73 277.7 266 57.1
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.2e-72 277.3 263 57.8
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.2e-72 277.3 259 57.9
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.2e-72 277.3 263 57.4
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.6e-72 276.9 263 57.4
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-72 276.9 259 57.9
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.6e-72 276.9 262 56.9
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.0e-72 276.6 278 54.7
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.7e-72 276.2 263 57.4
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 3.5e-72 275.8 263 57.8
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 3.5e-72 275.8 263 55.9
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 4.5e-72 275.4 263 57.0
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 4.5e-72 275.4 266 57.1
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 4.5e-72 275.4 263 57.0
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 4.5e-72 275.4 263 55.9
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 4.5e-72 275.4 264 56.4
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 5.9e-72 275.0 260 59.2
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 7.7e-72 274.6 263 57.0
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 7.7e-72 274.6 259 54.8
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-71 274.2 263 56.7
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-71 274.2 263 57.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.0e-71 274.2 263 56.7
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.0e-71 274.2 263 55.5
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.0e-71 274.2 256 59.0
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.0e-71 274.2 249 58.2
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.0e-71 274.2 263 55.5
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.3e-71 273.9 263 57.0
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.3e-71 273.9 263 56.3
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.7e-71 273.5 263 56.7
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.3e-71 273.1 263 57.0
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 3.8e-71 272.3 252 56.7
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.9e-70 270.0 263 57.4
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 5.5e-70 268.5 277 54.9
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 3.6e-69 265.8 263 56.3
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 4.0e-68 262.3 236 58.5
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 5.2e-68 261.9 244 57.4
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 8.9e-68 261.2 243 56.0
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.0e-67 260.0 232 57.3
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 7.5e-67 258.1 307 49.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 9.8e-67 257.7 263 55.1
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 8.3e-66 254.6 263 54.8
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 8.3e-66 254.6 263 54.8
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.1e-65 254.2 263 54.0
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.8e-60 236.9 263 50.6
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.8e-60 236.9 263 51.3
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 5.2e-60 235.3 219 54.8
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.2e-59 234.2 216 57.9
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 9.8e-59 231.1 202 59.9
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 7.8e-56 221.5 263 50.6
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.0e-55 221.1 197 56.9
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-55 220.7 402 37.3
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.3e-55 220.7 249 53.4
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 5.0e-55 218.8 407 36.6
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.1e-53 213.4 208 52.9
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.8e-52 210.3 186 58.1
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 2.0e-51 206.8 279 46.2
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.4e-51 206.1 208 51.9
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 6.6e-47 191.8 280 46.1
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 4.3e-46 189.1 178 57.3
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.2e-45 187.6 236 45.8
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.1e-41 172.6 238 42.9
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 5.4e-41 172.2 158 53.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.6e-38 162.2 222 46.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 8.1e-37 158.3 148 54.7
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.2e-36 155.6 132 61.4
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.0e-35 153.7 125 56.8
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-31 141.4 137 54.0
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 3.9e-31 139.4 288 36.8
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 6.2e-29 132.1 112 61.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 2.4e-28 130.2 128 54.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-27 125.9 187 39.0
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.5e-24 116.3 105 51.4
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.9e-18 96.7 103 53.4
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.0e-15 88.2 80 58.8
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 4.2e-09 66.2 243 26.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 7.1e-09 65.5 49 63.3
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.1e-09 65.5 37 86.5
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 2.3e-07 60.5 49 55.1
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 3.0e-07 60.1 176 27.8
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.3e-06 56.2 51 60.8


User provided reference genes

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