Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 3.4e-198 694.9 377 100.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.7e-24 117.9 299 29.1
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 9.5e-23 112.1 296 27.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 6.2e-22 109.4 298 29.2
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 8.1e-22 109.0 299 27.8
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.1e-21 108.6 296 27.7
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.1e-21 108.6 299 26.8
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.4e-21 108.2 298 27.9
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.4e-21 108.2 298 26.8
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.8e-21 107.8 308 26.3
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.8e-21 107.8 302 27.5
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.0e-21 106.7 296 27.4
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 5.2e-21 106.3 299 27.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 6.8e-21 105.9 292 26.4
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-20 105.1 299 27.4
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.2e-20 105.1 302 27.5
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.5e-20 104.8 301 26.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.0e-20 104.4 298 26.5
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.0e-20 104.4 300 25.7
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.6e-20 104.0 308 25.3
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.6e-20 104.0 299 27.8
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.4e-20 103.6 299 27.8
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 3.4e-20 103.6 297 26.6
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 3.4e-20 103.6 293 26.3
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 3.4e-20 103.6 298 26.5
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 3.4e-20 103.6 300 25.7
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 4.4e-20 103.2 292 25.7
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 4.4e-20 103.2 289 27.0
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.4e-20 103.2 298 26.2
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.4e-20 103.2 298 26.2
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 4.4e-20 103.2 299 27.4
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 4.4e-20 103.2 308 26.0
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 5.8e-20 102.8 294 26.5
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 5.8e-20 102.8 294 27.6
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.8e-20 102.8 295 27.5
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 7.5e-20 102.4 299 27.1
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 7.5e-20 102.4 298 25.5
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 7.5e-20 102.4 299 26.4
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.5e-20 102.4 301 25.6
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 7.5e-20 102.4 308 25.0
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 9.8e-20 102.1 299 27.1
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 9.8e-20 102.1 299 27.1
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 9.8e-20 102.1 299 27.1
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 9.8e-20 102.1 299 27.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 9.8e-20 102.1 296 26.0
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 9.8e-20 102.1 298 26.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 1.3e-19 101.7 307 28.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.3e-19 101.7 307 26.1
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-19 101.3 308 26.0
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.7e-19 101.3 294 28.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.7e-19 101.3 298 26.5
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.2e-19 100.9 308 25.6
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.9e-19 100.5 297 25.9
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.7e-19 100.1 308 25.6
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 3.7e-19 100.1 323 27.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.9e-19 99.8 301 26.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 4.9e-19 99.8 296 26.4
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.9e-19 99.8 290 26.6
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 4.9e-19 99.8 318 26.1
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.9e-19 99.8 308 26.0
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 6.4e-19 99.4 301 26.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 6.4e-19 99.4 296 26.0
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 6.4e-19 99.4 295 26.8
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 8.3e-19 99.0 290 26.2
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 8.3e-19 99.0 299 25.4
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.1e-18 98.6 290 26.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-18 98.6 301 24.9
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-18 98.6 301 24.9
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-18 98.6 298 25.2
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.1e-18 98.6 300 26.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.4e-18 98.2 299 27.8
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.9e-18 97.8 296 26.7
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.4e-18 97.4 298 25.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 3.2e-18 97.1 296 26.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 3.2e-18 97.1 291 26.5
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 3.2e-18 97.1 296 24.3
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.2e-18 97.1 295 24.4
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 4.1e-18 96.7 299 26.1
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 4.1e-18 96.7 296 26.0
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 5.4e-18 96.3 299 26.4
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.4e-18 96.3 297 26.6
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-18 95.9 296 24.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-18 95.9 296 24.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.1e-18 95.9 296 24.0
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 9.2e-18 95.5 296 24.0
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 9.2e-18 95.5 269 27.1
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.2e-17 95.1 292 25.0
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.6e-17 94.7 296 24.0
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.1e-17 94.4 294 25.9
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 3.5e-17 93.6 298 27.2
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 6.0e-17 92.8 311 26.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 7.8e-17 92.4 301 24.9
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.0e-16 92.0 269 26.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.3e-16 91.7 331 26.3
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.3e-16 90.9 257 27.2
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.3e-16 90.9 309 28.5
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 2.3e-16 90.9 351 24.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 6.6e-16 89.4 285 24.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.4e-13 81.6 300 24.7
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.3e-11 75.1 234 26.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 2.9e-11 73.9 221 29.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 8.4e-11 72.4 125 33.6
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.1e-10 72.0 295 25.4
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.9e-10 71.2 132 34.1
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 5.4e-10 69.7 234 26.1
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.6e-06 58.2 211 24.2
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.6e-06 57.0 137 28.5


User provided reference genes

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