Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO03G129 Micromonas commoda HOM05D004807 ORTHO05D005915 0.0e+00 2348.2 1203 100.0
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 4.9e-12 78.2 176 32.4
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 2.4e-11 75.9 116 37.1
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 2.4e-11 75.9 169 33.1
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 4.1e-11 75.1 176 30.1
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 1.2e-10 73.6 200 30.5
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 1.6e-10 73.2 116 36.2
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 2.0e-10 72.8 167 30.5
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 2.0e-10 72.8 167 30.5
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 2.7e-10 72.4 113 38.1
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 2.7e-10 72.4 113 38.1
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 2.7e-10 72.4 113 38.1
Ciclev10011020m.g Citrus clementina HOM05D004807 ORTHO05D005915 2.7e-10 72.4 116 35.3
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 2.7e-10 72.4 137 30.7
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 4.5e-10 71.6 115 35.7
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 5.9e-10 71.2 122 32.0
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 5.9e-10 71.2 174 32.2
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 7.8e-10 70.9 116 35.3
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 7.8e-10 70.9 113 38.1
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 7.8e-10 70.9 166 29.5
AagrBONN_evm.TU.Sc2ySwM_228.688 Anthoceros agrestis HOM05D004807 ORTHO05D005915 1.0e-09 70.5 157 33.8
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 1.0e-09 70.5 113 37.2
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 1.3e-09 70.1 121 34.7
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.3e-09 70.1 123 30.9
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 1.7e-09 69.7 116 36.2
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 1.7e-09 69.7 123 30.9
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.7e-09 69.7 123 30.9
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.7e-09 69.7 123 30.9
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.7e-09 69.7 123 30.9
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 1.7e-09 69.7 121 33.1
Dinv25024 Davidia involucrata HOM05D004807 ORTHO05D005915 2.3e-09 69.3 116 33.6
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 2.3e-09 69.3 116 34.5
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 2.3e-09 69.3 116 35.3
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 2.9e-09 68.9 117 35.0
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 3.9e-09 68.6 121 32.2
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 3.9e-09 68.6 115 35.7
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 3.9e-09 68.6 116 34.5
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 3.9e-09 68.6 116 35.3
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 3.9e-09 68.6 121 33.9
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 5.0e-09 68.2 116 34.5
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 5.0e-09 68.2 249 27.7
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 5.0e-09 68.2 115 35.7
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 5.0e-09 68.2 115 35.7
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 5.0e-09 68.2 115 35.7
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 5.0e-09 68.2 116 31.9
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 5.0e-09 68.2 121 31.4
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 6.6e-09 67.8 116 34.5
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 6.6e-09 67.8 135 31.9
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 6.6e-09 67.8 116 34.5
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 6.6e-09 67.8 118 35.6
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 6.6e-09 67.8 115 34.8
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 8.6e-09 67.4 115 35.7
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 8.6e-09 67.4 116 31.9
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 8.6e-09 67.4 122 31.1
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 1.1e-08 67.0 116 33.6
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 1.1e-08 67.0 122 31.1
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 1.1e-08 67.0 130 31.5
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.5e-08 66.6 116 34.5
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 1.9e-08 66.2 124 34.7
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 1.9e-08 66.2 116 31.9
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 1.9e-08 66.2 121 30.6
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 2.5e-08 65.9 125 31.2
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 3.3e-08 65.5 115 34.8
CSS0022615 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 3.3e-08 65.5 116 33.6
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 3.3e-08 65.5 110 32.7
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 4.3e-08 65.1 200 29.0
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 4.3e-08 65.1 123 30.1
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 5.6e-08 64.7 123 31.7
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 5.6e-08 64.7 123 31.7
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 5.6e-08 64.7 117 31.6
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 7.3e-08 64.3 121 29.8
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 9.5e-08 63.9 117 30.8
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 9.5e-08 63.9 117 32.5
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 9.5e-08 63.9 116 32.8
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 1.2e-07 63.5 116 33.6
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 2.1e-07 62.8 116 29.3
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 2.1e-07 62.8 113 31.0
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 2.1e-07 62.8 121 31.4
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 2.1e-07 62.8 121 33.9
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 4.7e-07 61.6 117 35.0
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 4.7e-07 61.6 121 33.1
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 6.1e-07 61.2 125 30.4
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 8.0e-07 60.8 116 33.6
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 8.0e-07 60.8 116 31.0
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 1.0e-06 60.5 117 35.0
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.0e-06 60.5 191 27.2
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 1.4e-06 60.1 116 31.0
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 1.4e-06 60.1 116 32.8
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.4e-06 60.1 116 32.8
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 1.4e-06 60.1 196 27.6
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 2.3e-06 59.3 115 32.2
unitig_0.g511 Utricularia gibba HOM05D004807 ORTHO05D005915 5.2e-06 58.2 121 28.1
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 6.8e-06 57.8 116 31.0
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 8.9e-06 57.4 168 27.4


User provided reference genes

Program Settings