Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 4.6e-255 884.0 436 100.0
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 9.3e-46 188.7 499 30.1
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 3.3e-43 180.3 489 29.9
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 5.4e-38 162.9 460 29.3
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 4.6e-37 159.8 497 27.6
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.1e-36 156.4 452 29.4
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 6.6e-36 156.0 467 30.0
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 8.7e-36 155.6 452 29.2
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 3.3e-35 153.7 462 29.9
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 7.3e-35 152.5 447 30.6
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 9.6e-35 152.1 440 28.9
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.6e-34 151.4 438 29.7
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.1e-34 151.0 439 29.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 2.1e-34 151.0 443 28.4
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 2.8e-34 150.6 438 29.0
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.8e-34 150.6 437 29.1
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.8e-34 150.6 437 29.1
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.6e-34 150.2 448 29.9
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.6e-34 150.2 439 27.8
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.6e-34 150.2 462 29.0
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.8e-34 149.8 449 28.5
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 6.2e-34 149.4 440 28.9
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.4e-33 148.3 444 29.1
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.8e-33 147.9 440 28.9
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.8e-33 147.9 444 29.1
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.8e-33 147.9 445 29.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.4e-33 147.5 437 28.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 3.1e-33 147.1 437 29.1
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 3.1e-33 147.1 437 27.9
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 3.1e-33 147.1 457 28.0
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 4.0e-33 146.7 463 30.2
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 4.0e-33 146.7 437 29.3
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 5.3e-33 146.4 466 27.5
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 6.9e-33 146.0 439 27.8
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.0e-33 145.6 440 28.6
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 9.0e-33 145.6 437 27.2
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.2e-32 145.2 467 27.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.2e-32 145.2 465 28.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.2e-32 145.2 440 29.1
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 1.5e-32 144.8 464 28.4
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.5e-32 144.8 472 28.0
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.0e-32 144.4 436 28.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 2.6e-32 144.1 468 27.4
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.6e-32 144.1 438 28.8
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.6e-32 144.1 433 27.5
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 3.4e-32 143.7 460 28.5
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 4.5e-32 143.3 444 28.8
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 5.8e-32 142.9 467 28.1
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 5.8e-32 142.9 437 27.2
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-31 141.7 440 27.5
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-31 141.7 463 27.9
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 2.2e-31 141.0 436 28.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 2.9e-31 140.6 441 27.2
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 2.9e-31 140.6 448 27.7
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 4.9e-31 139.8 445 28.3
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 6.4e-31 139.4 444 27.9
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 8.4e-31 139.0 438 28.8
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.4e-31 139.0 463 27.6
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.4e-30 138.3 438 28.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.9e-30 137.9 440 28.0
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.9e-30 137.9 473 28.1
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 5.5e-30 136.3 449 27.4
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 5.5e-30 136.3 464 28.7
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 9.3e-30 135.6 440 26.8
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 1.6e-29 134.8 437 28.1
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.6e-29 134.8 435 27.1
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 3.5e-29 133.7 449 26.5
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 4.6e-29 133.3 442 27.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 6.0e-29 132.9 463 28.9
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 7.9e-29 132.5 461 28.2
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.0e-28 132.1 457 27.4
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 2.3e-28 131.0 459 28.8
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 3.0e-28 130.6 463 28.7
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.0e-28 130.6 443 26.6
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 5.1e-28 129.8 448 27.2
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 6.7e-28 129.4 461 28.2
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 8.7e-28 129.0 181 40.9
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 3.3e-27 127.1 439 27.3
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.3e-27 127.1 435 26.2
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 3.3e-27 127.1 430 26.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 4.3e-27 126.7 459 28.8
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 4.3e-27 126.7 459 28.8
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 4.3e-27 126.7 459 28.8
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 9.6e-27 125.6 403 29.3
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 9.6e-27 125.6 432 26.2
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 9.6e-27 125.6 243 36.2
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.3e-26 125.2 463 28.5
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.6e-26 124.8 463 28.3
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 2.8e-26 124.0 436 26.6
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 4.8e-26 123.2 461 27.5
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 6.2e-26 122.9 461 26.2
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.1e-25 122.1 444 27.5
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.8e-25 121.3 449 26.9
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 6.9e-25 119.4 189 39.7
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 6.9e-25 119.4 170 40.6
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 2.0e-24 117.9 169 39.6
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.0e-24 117.9 217 35.5
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.6e-24 117.5 366 27.9
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 3.4e-24 117.1 432 27.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 5.8e-24 116.3 170 38.8
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 5.8e-24 116.3 226 34.5
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 7.6e-24 115.9 221 36.2
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.0e-23 115.5 181 37.6
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.2e-23 114.4 292 30.8
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.2e-23 114.4 409 27.4
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 2.9e-23 114.0 453 26.7
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.5e-22 110.9 181 37.0
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.2e-22 110.5 168 37.5
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.2e-21 108.6 447 25.7
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.2e-21 108.6 447 25.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 3.9e-20 103.6 184 37.5
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.6e-18 98.2 421 27.3
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 4.8e-10 70.1 117 39.3


User provided reference genes

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