Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 2.5e-206 721.8 361 100.0
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 9.1e-15 85.5 316 27.5
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 5.9e-14 82.8 286 31.5
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 1.0e-13 82.0 271 28.0
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 1.0e-13 82.0 271 30.3
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 1.3e-13 81.6 274 28.8
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 2.9e-13 80.5 218 31.7
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 5.0e-13 79.7 278 26.6
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 5.0e-13 79.7 297 27.9
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 8.6e-13 79.0 278 25.9
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-12 78.6 224 29.9
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 1.1e-12 78.6 274 27.7
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 1.1e-12 78.6 304 27.6
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 1.5e-12 78.2 272 27.6
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 1.9e-12 77.8 278 26.3
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 1.9e-12 77.8 278 27.0
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 1.9e-12 77.8 278 28.1
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 2.5e-12 77.4 218 30.7
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 2.5e-12 77.4 278 27.0
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 3.2e-12 77.0 218 29.4
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.2e-12 77.0 223 27.8
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 4.2e-12 76.6 275 28.0
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 4.2e-12 76.6 281 27.4
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 5.5e-12 76.3 271 29.2
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 5.5e-12 76.3 271 29.2
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 5.5e-12 76.3 227 30.4
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 7.2e-12 75.9 287 27.2
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 7.2e-12 75.9 218 30.3
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 1.2e-11 75.1 271 28.8
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 1.2e-11 75.1 272 27.9
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 1.2e-11 75.1 271 28.0
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 1.6e-11 74.7 268 28.7
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 1.6e-11 74.7 268 28.7
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 2.1e-11 74.3 274 28.5
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 2.1e-11 74.3 276 28.6
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 2.1e-11 74.3 220 30.0
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 2.1e-11 74.3 249 28.5
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 2.1e-11 74.3 218 30.3
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 2.8e-11 73.9 275 26.2
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 2.8e-11 73.9 277 25.6
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 2.8e-11 73.9 277 27.8
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 2.8e-11 73.9 277 27.8
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 2.8e-11 73.9 277 27.8
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 2.8e-11 73.9 224 29.0
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 3.6e-11 73.6 278 29.9
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 3.6e-11 73.6 223 26.9
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 3.6e-11 73.6 220 30.0
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 4.7e-11 73.2 224 29.9
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 8.0e-11 72.4 297 26.6
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 1.0e-10 72.0 282 28.4
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 1.4e-10 71.6 272 27.6
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 1.4e-10 71.6 224 31.2
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 1.4e-10 71.6 274 27.7
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 1.8e-10 71.2 273 26.0
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 1.8e-10 71.2 271 26.2
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 1.8e-10 71.2 268 25.7
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 1.8e-10 71.2 227 26.4
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 3.0e-10 70.5 284 27.8
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 3.0e-10 70.5 220 28.6
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 4.0e-10 70.1 228 28.9
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 5.2e-10 69.7 220 30.5
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 6.8e-10 69.3 266 26.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.2e-09 68.6 222 29.3
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 1.2e-09 68.6 272 28.3
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 1.5e-09 68.2 273 25.6
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 1.5e-09 68.2 223 27.8
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.5e-09 68.2 227 30.0
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 4.4e-09 66.6 216 26.4
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 4.4e-09 66.6 220 25.5
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 5.7e-09 66.2 268 26.5
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 5.7e-09 66.2 220 27.3
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 7.5e-09 65.9 234 26.5
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 9.8e-09 65.5 274 27.0
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 9.8e-09 65.5 228 27.2
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.3e-08 65.1 271 25.8
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.7e-08 64.7 244 25.4
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 1.7e-08 64.7 278 25.9
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 2.2e-08 64.3 220 26.8
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 2.2e-08 64.3 219 27.4
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 2.8e-08 63.9 225 25.3
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 4.9e-08 63.2 278 24.8
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 4.9e-08 63.2 291 26.5
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 4.9e-08 63.2 218 27.1
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 6.3e-08 62.8 278 24.5
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 6.3e-08 62.8 224 26.8
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 8.3e-08 62.4 273 27.1
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.1e-07 62.0 219 27.9
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.1e-07 62.0 223 25.6
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 1.1e-07 62.0 223 25.6
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.8e-07 61.2 271 25.5
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 1.8e-07 61.2 227 25.6
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 3.1e-07 60.5 156 30.8
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 4.1e-07 60.1 225 26.2
Cre06.g278187 Chlamydomonas reinhardtii HOM05D066552 ORTHO05D044319 9.2e-07 58.9 181 26.0
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 2.0e-06 57.8 222 25.7
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 2.0e-06 57.8 233 26.2
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 2.0e-06 57.8 209 27.8
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 2.7e-06 57.4 223 27.4
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 3.5e-06 57.0 277 24.2
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 3.5e-06 57.0 220 25.9
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 4.5e-06 56.6 233 25.8
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 4.5e-06 56.6 226 24.3
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 5.9e-06 56.2 188 29.3
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 5.9e-06 56.2 229 26.2
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 7.8e-06 55.8 141 31.2


User provided reference genes

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