Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 3.5e-216 754.6 364 100.0
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 2.4e-95 353.2 365 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 5.3e-95 352.1 363 48.8
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.2e-94 350.9 364 47.5
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 1.5e-94 350.5 366 48.6
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 2.0e-94 350.1 365 49.6
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.0e-94 350.1 367 48.8
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 5.8e-94 348.6 365 47.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 5.8e-94 348.6 365 47.9
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 1.3e-93 347.4 366 47.3
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 1.7e-93 347.1 361 48.5
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 2.2e-93 346.7 367 47.7
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 2.9e-93 346.3 366 47.0
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 4.9e-93 345.5 366 47.5
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 8.4e-93 344.7 367 47.4
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 8.4e-93 344.7 366 47.3
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.1e-92 344.4 368 47.3
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 1.1e-92 344.4 371 48.0
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 1.4e-92 344.0 363 47.9
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.4e-92 344.0 366 47.3
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 2.5e-92 343.2 371 47.4
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 3.2e-92 342.8 364 48.1
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 3.2e-92 342.8 365 47.9
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 5.5e-92 342.0 367 47.1
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 5.5e-92 342.0 363 47.4
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 7.1e-92 341.7 365 47.1
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 7.1e-92 341.7 371 46.1
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 7.1e-92 341.7 363 46.3
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 9.3e-92 341.3 366 46.4
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 9.3e-92 341.3 362 47.8
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 1.2e-91 340.9 367 47.1
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.2e-91 340.9 365 47.1
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.2e-91 340.9 367 47.1
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 2.1e-91 340.1 365 47.7
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 2.1e-91 340.1 361 47.4
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 3.5e-91 339.3 365 46.8
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 4.6e-91 339.0 366 46.7
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 7.9e-91 338.2 366 48.1
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.0e-90 337.8 363 47.7
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.8e-90 337.0 361 47.1
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 1.8e-90 337.0 366 46.7
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 2.3e-90 336.7 362 47.8
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 3.0e-90 336.3 359 48.5
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 3.9e-90 335.9 362 48.3
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 3.9e-90 335.9 365 47.1
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 3.9e-90 335.9 367 46.6
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 3.9e-90 335.9 358 46.6
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 5.1e-90 335.5 368 46.2
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 5.1e-90 335.5 368 46.2
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 5.1e-90 335.5 365 47.1
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 6.7e-90 335.1 363 47.1
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 8.7e-90 334.7 362 46.7
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 8.7e-90 334.7 363 45.5
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.1e-89 334.3 362 47.2
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.1e-89 334.3 365 45.8
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 1.1e-89 334.3 365 48.5
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 1.9e-89 333.6 365 46.0
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 3.3e-89 332.8 361 46.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 4.3e-89 332.4 365 46.3
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 5.7e-89 332.0 333 50.2
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 5.7e-89 332.0 388 45.1
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 9.6e-89 331.3 362 46.7
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 9.6e-89 331.3 370 46.5
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 9.6e-89 331.3 387 45.7
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 1.3e-88 330.9 365 46.0
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 1.6e-88 330.5 365 44.7
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 1.6e-88 330.5 385 44.2
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 2.1e-88 330.1 368 46.5
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 2.1e-88 330.1 368 46.7
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 2.8e-88 329.7 362 47.0
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.8e-88 329.7 367 45.0
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 6.2e-88 328.6 368 46.7
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 6.2e-88 328.6 372 46.2
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 1.8e-87 327.0 364 45.1
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 3.1e-87 326.2 360 44.2
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 5.3e-87 325.5 361 45.4
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 2.0e-86 323.6 358 45.5
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 3.4e-86 322.8 366 44.8
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 7.6e-86 321.6 390 42.3
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 7.6e-86 321.6 365 45.5
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.7e-85 320.5 365 45.2
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 3.8e-85 319.3 381 43.0
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 8.4e-85 318.2 368 45.7
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 7.1e-84 315.1 358 45.5
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 3.5e-83 312.8 361 45.2
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 4.6e-83 312.4 434 40.3
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 3.9e-82 309.3 365 44.4
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 7.4e-81 305.1 363 43.5
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 9.7e-81 304.7 313 48.2
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 9.7e-81 304.7 362 43.6
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.8e-80 303.1 343 46.4
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 1.1e-79 301.2 342 44.2
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.0e-78 297.0 363 42.4
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.0e-78 297.0 364 44.2
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 2.9e-77 293.1 327 46.2
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 5.0e-77 292.4 302 49.0
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 2.5e-76 290.0 365 43.0
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.5e-73 280.8 322 43.8
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 2.5e-73 280.0 335 43.3
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.2e-72 276.9 349 38.4
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.4e-71 273.5 354 38.1
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 6.5e-61 238.8 359 36.8
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 1.9e-60 237.3 284 42.6
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 3.5e-54 216.5 236 48.3
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 5.0e-53 212.6 266 41.7
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 5.5e-52 209.1 278 43.5
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 2.6e-49 200.3 471 32.3
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 1.7e-37 161.0 364 32.1
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 1.5e-36 157.9 251 40.6
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.4e-33 146.7 324 30.9
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 5.4e-31 139.4 183 41.5
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 9.2e-31 138.7 173 42.2
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 8.0e-27 125.6 146 43.8
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 3.1e-26 123.6 239 31.0
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.3e-16 89.0 108 41.7
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 7.8e-14 82.4 107 40.2
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.5e-09 68.2 57 57.9
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 4.4e-09 66.6 57 57.9
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 5.8e-09 66.2 56 57.1


User provided reference genes

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