Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 1.6e-169 599.4 298 100.0
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 1.1e-29 134.8 289 35.3
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.0e-24 118.2 279 31.2
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 1.4e-24 117.9 248 33.1
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 4.0e-24 116.3 279 30.8
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 4.0e-24 116.3 245 31.8
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 2.0e-23 114.0 244 33.6
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 2.6e-23 113.6 267 31.8
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 9.8e-23 111.7 281 30.6
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 9.8e-23 111.7 295 30.2
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 2.2e-22 110.5 295 29.8
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 1.1e-21 108.2 295 30.2
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 2.4e-21 107.1 245 32.2
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 3.2e-21 106.7 244 30.7
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 3.2e-21 106.7 247 30.4
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 3.2e-21 106.7 246 30.9
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 4.1e-21 106.3 244 30.7
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 5.4e-21 105.9 250 31.2
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 5.4e-21 105.9 297 29.3
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 5.4e-21 105.9 253 31.2
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 5.4e-21 105.9 246 30.9
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 7.0e-21 105.5 249 30.1
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 9.2e-21 105.1 247 30.0
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 1.6e-20 104.4 250 31.6
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.6e-20 104.4 245 31.0
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.6e-20 104.4 243 32.1
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 2.0e-20 104.0 297 29.0
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 2.0e-20 104.0 262 29.0
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 2.7e-20 103.6 247 31.2
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 2.7e-20 103.6 248 29.8
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 2.7e-20 103.6 244 30.3
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.5e-20 103.2 245 31.0
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.5e-20 103.2 245 30.6
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 4.6e-20 102.8 247 30.0
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 4.6e-20 102.8 248 31.0
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 4.6e-20 102.8 319 27.0
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 6.0e-20 102.4 240 32.5
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 6.0e-20 102.4 248 29.4
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 7.8e-20 102.1 247 31.6
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.8e-20 102.1 245 31.0
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.8e-20 102.1 247 31.6
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 7.8e-20 102.1 247 31.6
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.0e-19 101.7 264 31.1
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 1.0e-19 101.7 275 30.5
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 1.0e-19 101.7 248 29.0
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.3e-19 101.3 262 29.0
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 1.3e-19 101.3 236 31.4
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 1.7e-19 100.9 247 28.7
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 3.0e-19 100.1 287 28.6
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 3.0e-19 100.1 242 31.4
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 5.0e-19 99.4 247 30.4
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 6.6e-19 99.0 261 31.4
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 8.6e-19 98.6 249 29.7
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 1.1e-18 98.2 251 31.1
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.5e-18 97.8 206 32.5
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 1.9e-18 97.4 254 29.5
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 1.9e-18 97.4 254 29.5
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 1.9e-18 97.4 254 29.5
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 1.9e-18 97.4 302 28.1
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 2.5e-18 97.1 246 30.5
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 2.5e-18 97.1 250 29.6
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 2.5e-18 97.1 247 30.4
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 3.3e-18 96.7 261 30.3
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 3.3e-18 96.7 248 30.2
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 3.3e-18 96.7 216 31.9
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.3e-18 96.3 275 26.9
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 4.3e-18 96.3 244 29.9
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 4.3e-18 96.3 244 29.9
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 4.3e-18 96.3 287 29.6
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 4.3e-18 96.3 241 29.9
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 4.3e-18 96.3 260 31.2
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 7.3e-18 95.5 248 30.6
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 7.3e-18 95.5 248 31.0
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 9.5e-18 95.1 248 29.4
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 9.5e-18 95.1 235 29.4
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.6e-17 94.4 278 28.4
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.6e-17 94.4 248 30.6
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 2.1e-17 94.0 253 28.1
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 2.1e-17 94.0 244 29.1
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 2.8e-17 93.6 250 29.2
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 3.6e-17 93.2 248 30.2
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 4.7e-17 92.8 240 28.8
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 4.7e-17 92.8 182 34.6
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 4.7e-17 92.8 241 29.5
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 4.7e-17 92.8 252 29.8
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 6.2e-17 92.4 248 29.0
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 6.2e-17 92.4 240 28.8
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 8.1e-17 92.0 280 27.5
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.1e-16 91.7 248 31.5
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 1.1e-16 91.7 238 29.8
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 1.1e-16 91.7 249 30.9
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 1.8e-16 90.9 254 28.3
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 2.3e-16 90.5 245 29.4
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 2.3e-16 90.5 245 29.4
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 3.1e-16 90.1 246 30.1
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 3.1e-16 90.1 247 29.6
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 1.2e-15 88.2 237 30.4
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 3.4e-15 86.7 243 28.4
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 5.8e-15 85.9 242 29.8
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 7.5e-15 85.5 240 29.2
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 9.8e-15 85.1 156 35.9
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 6.4e-14 82.4 202 29.7
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.9e-13 80.9 202 28.2
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 2.4e-13 80.5 183 30.1
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 2.4e-13 80.5 128 37.5
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 3.2e-13 80.1 246 27.2
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 3.2e-13 80.1 161 30.4
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 5.4e-13 79.3 226 27.9
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 9.2e-13 78.6 303 24.4
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 6.6e-11 72.4 202 29.7
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 4.3e-10 69.7 226 28.3
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.2e-09 68.2 261 23.8
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 5.2e-08 62.8 233 25.8
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 5.2e-08 62.8 318 24.8
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 5.8e-07 59.3 252 25.8


User provided reference genes

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