Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G221 Micromonas commoda HOM05D001067 ORTHO05D000876 7.1e-223 776.9 387 100.0
PSO210G5127 Papaver somniferum HOM05D001067 ORTHO05D000876 1.3e-11 75.1 145 33.8
Manes.01G004650 Manihot esculenta HOM05D001067 ORTHO05D000876 2.9e-11 73.9 146 36.3
Lsat_1_v5_gn_7_115281 Lactuca sativa HOM05D001067 ORTHO05D000876 5.0e-11 73.2 200 31.0
COL.COLO4_07755 Corchorus olitorius HOM05D001067 ORTHO05D000876 1.1e-10 72.0 147 34.7
Gohir.D01G083400 Gossypium hirsutum HOM05D001067 ORTHO05D000876 1.1e-10 72.0 148 35.1
Lsat_1_v5_gn_7_115181 Lactuca sativa HOM05D001067 ORTHO05D000876 1.1e-10 72.0 145 35.2
MBI15_g27840_MAGBIO Magnolia biondii HOM05D001067 ORTHO05D000876 1.1e-10 72.0 140 33.6
Gohir.A01G098900 Gossypium hirsutum HOM05D001067 ORTHO05D000876 1.9e-10 71.2 148 34.5
Manes.01G004860 Manihot esculenta HOM05D001067 ORTHO05D000876 1.9e-10 71.2 147 36.1
Gohir.A01G098800 Gossypium hirsutum HOM05D001067 ORTHO05D000876 2.5e-10 70.9 148 34.5
Gohir.D01G083300 Gossypium hirsutum HOM05D001067 ORTHO05D000876 2.5e-10 70.9 148 35.1
SEGI_31320 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 2.5e-10 70.9 193 32.6
vmacro11623 Vaccinium macrocarpon HOM05D001067 ORTHO05D000876 2.5e-10 70.9 192 31.2
Gorai.002G108900 Gossypium raimondii HOM05D001067 ORTHO05D000876 3.3e-10 70.5 148 34.5
SEGI_05271 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 3.3e-10 70.5 193 32.1
CANSAT35G1105 Cannabis sativa HOM05D001067 ORTHO05D000876 4.3e-10 70.1 147 36.1
HanXRQChr04g0114561 Helianthus annuus HOM05D001067 ORTHO05D000876 4.3e-10 70.1 142 35.9
DCAR_017591 Daucus carota HOM05D001067 ORTHO05D000876 5.6e-10 69.7 145 33.1
ECA236G0842 Erigeron canadensis HOM05D001067 ORTHO05D000876 5.6e-10 69.7 141 34.0
Peaxi162Scf00232g10022 Petunia axillaris HOM05D001067 ORTHO05D000876 5.6e-10 69.7 143 32.9
PGR142G2019 Punica granatum HOM05D001067 ORTHO05D000876 5.6e-10 69.7 146 37.0
Aqoxy5G01390 Aquilegia oxysepala HOM05D001067 ORTHO05D000876 9.5e-10 68.9 145 33.1
Nn1g07588 Nelumbo nucifera HOM05D001067 ORTHO05D000876 9.5e-10 68.9 142 34.5
arahy.Tifrunner.gnm1.ann1.U1IAK7 Arachis hypogaea HOM05D001067 ORTHO05D000876 1.2e-09 68.6 145 34.5
Sp1g41360 Schrenkiella parvula HOM05D001067 ORTHO05D000876 1.2e-09 68.6 146 35.6
SEGI_01805 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 1.2e-09 68.6 194 30.9
Duzib213G0748 Durio zibethinus HOM05D001067 ORTHO05D000876 1.6e-09 68.2 151 32.5
Thhalv10011398m.g Eutrema salsugineum HOM05D001067 ORTHO05D000876 1.6e-09 68.2 146 35.6
Peaxi162Scf00232g00227 Petunia axillaris HOM05D001067 ORTHO05D000876 1.6e-09 68.2 141 36.2
Rhsim06G0233600 Rhododendron simsii HOM05D001067 ORTHO05D000876 1.6e-09 68.2 192 30.2
ECA236G2579 Erigeron canadensis HOM05D001067 ORTHO05D000876 2.1e-09 67.8 207 30.0
Nitab4.5_0001112g0050 Nicotiana tabacum HOM05D001067 ORTHO05D000876 2.1e-09 67.8 143 34.3
Os09g0479400 Oryza sativa ssp. japonica HOM05D001067 ORTHO05D000876 2.1e-09 67.8 149 33.6
Glyma.18G073100 Glycine max HOM05D001067 ORTHO05D000876 2.8e-09 67.4 142 34.5
AL1G63900 Arabidopsis lyrata HOM05D001067 ORTHO05D000876 3.6e-09 67.0 146 34.2
AT1G55790 Arabidopsis thaliana HOM05D001067 ORTHO05D000876 3.6e-09 67.0 146 34.2
arahy.Tifrunner.gnm1.ann1.80T7UU Arachis hypogaea HOM05D001067 ORTHO05D000876 3.6e-09 67.0 145 33.8
arahy.Tifrunner.gnm1.ann1.E39P6R Arachis hypogaea HOM05D001067 ORTHO05D000876 3.6e-09 67.0 145 33.8
arahy.Tifrunner.gnm1.ann1.RCFM9P Arachis hypogaea HOM05D001067 ORTHO05D000876 3.6e-09 67.0 145 33.8
BraA06t23218Z Brassica rapa HOM05D001067 ORTHO05D000876 4.7e-09 66.6 147 34.7
CiPaw.11G207900 Carya illinoinensis HOM05D001067 ORTHO05D000876 4.7e-09 66.6 209 29.7
Lj6g0019358 Lotus japonicus HOM05D001067 ORTHO05D000876 4.7e-09 66.6 145 35.2
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 6.1e-09 66.2 142 33.8
ECA236G0124 Erigeron canadensis HOM05D001067 ORTHO05D000876 6.1e-09 66.2 145 32.4
Solyc07g065920.4 Solanum lycopersicum HOM05D001067 ORTHO05D000876 6.1e-09 66.2 143 35.0
Sopen07g034110 Solanum pennellii HOM05D001067 ORTHO05D000876 6.1e-09 66.2 143 35.0
A06p00020 Brassica napus HOM05D001067 ORTHO05D000876 1.0e-08 65.5 147 34.7
ECA236G2652 Erigeron canadensis HOM05D001067 ORTHO05D000876 1.0e-08 65.5 146 34.2
QL04p074227 Quercus lobata HOM05D001067 ORTHO05D000876 1.0e-08 65.5 148 33.1
Hund01849 Selenicereus undatus HOM05D001067 ORTHO05D000876 1.0e-08 65.5 143 33.6
THA.LOC104822783 Tarenaya hassleriana HOM05D001067 ORTHO05D000876 1.0e-08 65.5 146 34.2
Atru.chr2.3662 Acer truncatum HOM05D001067 ORTHO05D000876 1.4e-08 65.1 146 32.9
Carub.0001s4436 Capsella rubella HOM05D001067 ORTHO05D000876 1.4e-08 65.1 192 31.8
Eucgr.F01443 Eucalyptus grandis HOM05D001067 ORTHO05D000876 1.4e-08 65.1 140 35.7
CAN.G623.47 Capsicum annuum HOM05D001067 ORTHO05D000876 1.8e-08 64.7 141 32.6
SEGI_02535 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 1.8e-08 64.7 206 30.6
GSVIVG01014811001 Vitis vinifera HOM05D001067 ORTHO05D000876 1.8e-08 64.7 189 31.7
Lj6g0018198 Lotus japonicus HOM05D001067 ORTHO05D000876 2.3e-08 64.3 145 33.8
SEGI_00462 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 2.3e-08 64.3 266 28.6
THA.LOC104813460 Tarenaya hassleriana HOM05D001067 ORTHO05D000876 2.3e-08 64.3 149 31.5
THA.LOC104814008 Tarenaya hassleriana HOM05D001067 ORTHO05D000876 2.3e-08 64.3 149 33.6
Zm00001eb316150 Zea mays HOM05D001067 ORTHO05D000876 2.3e-08 64.3 163 31.9
EL10Ac4g08087 Beta vulgaris HOM05D001067 ORTHO05D000876 4.0e-08 63.5 148 33.8
Carub.0001s4435 Capsella rubella HOM05D001067 ORTHO05D000876 4.0e-08 63.5 146 33.6
Phvul.006G059700 Phaseolus vulgaris HOM05D001067 ORTHO05D000876 4.0e-08 63.5 193 31.1
PGSC0003DMG400022262 Solanum tuberosum HOM05D001067 ORTHO05D000876 4.0e-08 63.5 141 35.5
EL10Ac8g20631 Beta vulgaris HOM05D001067 ORTHO05D000876 5.2e-08 63.2 146 32.9
BcaB07g33189 Brassica carinata HOM05D001067 ORTHO05D000876 5.2e-08 63.2 146 33.6
BraA08t32087Z Brassica rapa HOM05D001067 ORTHO05D000876 5.2e-08 63.2 147 35.4
Ciclev10015551m.g Citrus clementina HOM05D001067 ORTHO05D000876 5.2e-08 63.2 147 33.3
Os09g0479300 Oryza sativa ssp. japonica HOM05D001067 ORTHO05D000876 5.2e-08 63.2 206 29.1
TPR.G17951 Trifolium pratense HOM05D001067 ORTHO05D000876 5.2e-08 63.2 140 32.9
Cfa021908 Carpinus fangiana HOM05D001067 ORTHO05D000876 6.8e-08 62.8 142 33.8
Rhsim06G0233200 Rhododendron simsii HOM05D001067 ORTHO05D000876 6.8e-08 62.8 226 27.0
SalBow8G3149 Salvia bowleyana HOM05D001067 ORTHO05D000876 6.8e-08 62.8 145 32.4
SalBow8G3489 Salvia bowleyana HOM05D001067 ORTHO05D000876 6.8e-08 62.8 145 32.4
DCAR_017592 Daucus carota HOM05D001067 ORTHO05D000876 8.9e-08 62.4 151 30.5
Psat5g165960 Pisum sativum HOM05D001067 ORTHO05D000876 8.9e-08 62.4 140 35.7
Cc05_g15460 Coffea canephora HOM05D001067 ORTHO05D000876 1.2e-07 62.0 141 34.0
Sabra11G0139900 Salix brachista HOM05D001067 ORTHO05D000876 1.2e-07 62.0 146 30.8
Sed0019745 Sechium edule HOM05D001067 ORTHO05D000876 1.2e-07 62.0 140 34.3
Hund01850 Selenicereus undatus HOM05D001067 ORTHO05D000876 1.2e-07 62.0 143 32.2
Carub.0007s1440 Capsella rubella HOM05D001067 ORTHO05D000876 1.5e-07 61.6 148 32.4
AUR62015696 Chenopodium quinoa HOM05D001067 ORTHO05D000876 1.5e-07 61.6 143 34.3
Rhsim06G0233400 Rhododendron simsii HOM05D001067 ORTHO05D000876 1.5e-07 61.6 191 27.7
AUR62024647 Chenopodium quinoa HOM05D001067 ORTHO05D000876 2.0e-07 61.2 179 30.7
HanXRQChr17g0558211 Helianthus annuus HOM05D001067 ORTHO05D000876 2.0e-07 61.2 200 30.5
Medtr3g061070 Medicago truncatula HOM05D001067 ORTHO05D000876 2.0e-07 61.2 141 35.5
CSS0041838 Camellia sinensis var. sinensis HOM05D001067 ORTHO05D000876 2.6e-07 60.8 192 29.2
DCAR_013777 Daucus carota HOM05D001067 ORTHO05D000876 2.6e-07 60.8 190 30.0
Psat5g165880 Pisum sativum HOM05D001067 ORTHO05D000876 2.6e-07 60.8 140 34.3
TAR629G2815 Trochodendron aralioides HOM05D001067 ORTHO05D000876 2.6e-07 60.8 202 28.7
Aa31LG10G400 Aethionema arabicum HOM05D001067 ORTHO05D000876 3.4e-07 60.5 175 29.7
EL10As5g23535 Beta vulgaris HOM05D001067 ORTHO05D000876 3.4e-07 60.5 179 30.7
AUR62011800 Chenopodium quinoa HOM05D001067 ORTHO05D000876 3.4e-07 60.5 179 30.7
Potri.011G165600 Populus trichocarpa HOM05D001067 ORTHO05D000876 3.4e-07 60.5 146 30.8
Prupe.3G193000 Prunus persica HOM05D001067 ORTHO05D000876 3.4e-07 60.5 183 29.5
SEGI_07922 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 3.4e-07 60.5 176 31.2
THA.LOC104814009 Tarenaya hassleriana HOM05D001067 ORTHO05D000876 3.4e-07 60.5 149 30.9
VMungo0464G0005 Vigna mungo HOM05D001067 ORTHO05D000876 3.4e-07 60.5 152 28.9
A08p00300 Brassica napus HOM05D001067 ORTHO05D000876 4.4e-07 60.1 142 35.2
Lsat_1_v5_gn_9_107920 Lactuca sativa HOM05D001067 ORTHO05D000876 4.4e-07 60.1 146 30.1
PSO210G0634 Papaver somniferum HOM05D001067 ORTHO05D000876 4.4e-07 60.1 138 31.9
TPR.G17927 Trifolium pratense HOM05D001067 ORTHO05D000876 4.4e-07 60.1 140 32.9
VMungo0540G1520 Vigna mungo HOM05D001067 ORTHO05D000876 4.4e-07 60.1 147 32.7
Sc17g0008080 Simmondsia chinensis HOM05D001067 ORTHO05D000876 5.8e-07 59.7 193 28.5
CARHR045500 Cardamine hirsuta HOM05D001067 ORTHO05D000876 7.5e-07 59.3 146 32.2
Duzib213G0658 Durio zibethinus HOM05D001067 ORTHO05D000876 7.5e-07 59.3 126 34.9
PRCOL_00004444 Prasinoderma coloniale HOM05D001067 ORTHO05D000876 7.5e-07 59.3 148 34.5
TAR629G1281 Trochodendron aralioides HOM05D001067 ORTHO05D000876 7.5e-07 59.3 202 28.2
Eucgr.F01440 Eucalyptus grandis HOM05D001067 ORTHO05D000876 9.8e-07 58.9 140 32.9
Thhalv10027179m.g Eutrema salsugineum HOM05D001067 ORTHO05D000876 9.8e-07 58.9 201 29.4
Medtr6g082340 Medicago truncatula HOM05D001067 ORTHO05D000876 9.8e-07 58.9 144 30.6
C03p93220 Brassica napus HOM05D001067 ORTHO05D000876 1.3e-06 58.5 147 34.0
BolC3t21620H Brassica oleracea HOM05D001067 ORTHO05D000876 1.3e-06 58.5 147 34.0
AUR62020508 Chenopodium quinoa HOM05D001067 ORTHO05D000876 1.3e-06 58.5 154 29.9
MBI15_g19858_MAGBIO Magnolia biondii HOM05D001067 ORTHO05D000876 1.3e-06 58.5 185 27.6
Psat4g145920 Pisum sativum HOM05D001067 ORTHO05D000876 1.3e-06 58.5 151 31.8
QL05p066603 Quercus lobata HOM05D001067 ORTHO05D000876 1.3e-06 58.5 181 30.4
vmacro12054 Vaccinium macrocarpon HOM05D001067 ORTHO05D000876 1.3e-06 58.5 189 29.1
Lj1C896G13 Lonicera japonica HOM05D001067 ORTHO05D000876 1.7e-06 58.2 141 29.8
MD09G1133600 Malus domestica HOM05D001067 ORTHO05D000876 1.7e-06 58.2 146 33.6
SGA_v2.0_scaffold7G03531 Striga asiatica HOM05D001067 ORTHO05D000876 1.7e-06 58.2 142 30.3
Cfa021909 Carpinus fangiana HOM05D001067 ORTHO05D000876 2.2e-06 57.8 199 28.1
AUR62020510 Chenopodium quinoa HOM05D001067 ORTHO05D000876 2.2e-06 57.8 140 32.9
FAN02G4555 Fragaria x ananassa HOM05D000191 ORTHO05D000876 2.2e-06 57.8 197 29.4
QL04p074238 Quercus lobata HOM05D001067 ORTHO05D000876 2.2e-06 57.8 145 33.1
SEGI_26186 Sequoiadendron giganteum HOM05D001067 ORTHO05D000876 2.2e-06 57.8 193 29.0
vmacro12055 Vaccinium macrocarpon HOM05D001067 ORTHO05D000876 2.2e-06 57.8 189 30.2
ATR0751G115 Amborella trichopoda HOM05D001067 ORTHO05D000876 2.9e-06 57.4 146 31.5
MSTRG.7027 Avicennia marina HOM05D001067 ORTHO05D000876 2.9e-06 57.4 140 32.1
A01p17750 Brassica napus HOM05D001067 ORTHO05D000876 2.9e-06 57.4 154 31.2
BraA01t01730Z Brassica rapa HOM05D001067 ORTHO05D000876 2.9e-06 57.4 154 31.2
Prupe.3G193400 Prunus persica HOM05D000191 ORTHO05D000122 2.9e-06 57.4 184 28.3
Peaxi162Scf00232g10023 Petunia axillaris HOM05D001067 ORTHO05D000876 3.7e-06 57.0 114 35.1
SalBow8G0336 Salvia bowleyana HOM05D001067 ORTHO05D000876 3.7e-06 57.0 145 29.7
GSVIVG01030133001 Vitis vinifera HOM05D000191 ORTHO05D000122 3.7e-06 57.0 148 29.7
Ca_14847_v3 Cicer arietinum L. HOM05D001067 ORTHO05D000876 4.9e-06 56.6 140 30.0
CSS0003785 Camellia sinensis var. sinensis HOM05D001067 ORTHO05D000876 6.4e-06 56.2 137 31.4
ClCG09G021640 Citrullus lanatus HOM05D001067 ORTHO05D000876 6.4e-06 56.2 160 31.2
MD10G1210100 Malus domestica HOM05D001067 ORTHO05D000876 6.4e-06 56.2 149 28.9
PGR083G0862 Punica granatum HOM05D001067 ORTHO05D000876 6.4e-06 56.2 149 30.2
AUR62020509 Chenopodium quinoa HOM05D001067 ORTHO05D000876 8.3e-06 55.8 140 32.9


User provided reference genes

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