Gene: AT1G55790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G55790
- Transcript Identifier AT1G55790.1
- Gene Type Coding gene
- Location Chr1 : 20854030-20856069 : negative
Gene Family Information
- ID HOM05D001067
- #Genes/#Species 573/93
- Phylogenetic origin
- ID ORTHO05D000876
- #Genes/#Species 573/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G55790.1
- uniprot F4I1X0
Descriptions
- Description ferredoxin-fold anticodon-binding domain protein
- Computational description FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Domain of unknown function DUF2431 (InterPro:IPR019446); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF2431) (TAIR:AT1G55800.1); Has 348 Blast hits to 344 proteins in 131 species: Archae - 0; Bacteria - 16; Metazoa - 59; Fungi - 100; Plants - 130; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070475 | IBA | Gene Ontology | rRNA base methylation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070042 | IBA | Gene Ontology | rRNA (uridine-N3-)-methyltransferase activity | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |