Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G084 Micromonas commoda HOM05D005013 ORTHO05D006005 8.0e-216 753.4 369 100.0
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 1.5e-28 131.3 358 27.4
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 1.9e-28 131.0 356 27.8
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 3.7e-27 126.7 358 27.1
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 3.7e-27 126.7 353 28.3
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 8.1e-27 125.6 354 29.1
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 3.1e-26 123.6 353 27.5
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 5.3e-26 122.9 354 28.5
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 5.3e-26 122.9 354 28.2
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 5.3e-26 122.9 358 30.2
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 6.9e-26 122.5 363 27.0
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 6.9e-26 122.5 354 27.7
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 9.0e-26 122.1 354 28.2
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 1.2e-25 121.7 353 28.0
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 1.2e-25 121.7 355 27.3
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 1.5e-25 121.3 357 27.5
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 2.0e-25 120.9 354 27.7
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 2.0e-25 120.9 357 28.3
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 2.0e-25 120.9 354 27.1
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 2.0e-25 120.9 354 27.7
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 3.4e-25 120.2 354 28.0
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 4.5e-25 119.8 356 27.2
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 5.8e-25 119.4 356 27.8
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 5.8e-25 119.4 356 27.2
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 5.8e-25 119.4 356 27.2
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 7.6e-25 119.0 356 26.1
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 7.6e-25 119.0 357 26.3
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 7.6e-25 119.0 353 26.9
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 1.0e-24 118.6 353 25.8
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 1.0e-24 118.6 351 28.2
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.7e-24 117.9 356 27.5
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 1.7e-24 117.9 353 26.6
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 2.2e-24 117.5 356 27.5
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 2.2e-24 117.5 358 27.4
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 2.2e-24 117.5 356 28.1
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 3.8e-24 116.7 352 27.0
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 3.8e-24 116.7 407 25.3
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 3.8e-24 116.7 358 26.5
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 4.9e-24 116.3 355 27.9
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 6.5e-24 115.9 358 27.4
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 8.4e-24 115.5 354 27.1
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 1.1e-23 115.2 354 27.1
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 1.4e-23 114.8 352 25.9
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 1.4e-23 114.8 354 27.1
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.4e-23 114.8 358 26.3
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 1.9e-23 114.4 354 26.8
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.9e-23 114.4 352 26.7
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 2.5e-23 114.0 334 28.4
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 2.5e-23 114.0 355 27.0
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 2.5e-23 114.0 352 26.4
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 3.2e-23 113.6 356 27.8
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 3.2e-23 113.6 354 27.7
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.2e-23 113.2 356 27.8
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 4.2e-23 113.2 355 26.2
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 5.5e-23 112.8 352 25.6
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 5.5e-23 112.8 355 26.5
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 7.1e-23 112.5 355 27.6
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 9.3e-23 112.1 354 26.3
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 9.3e-23 112.1 356 27.5
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 9.3e-23 112.1 355 27.9
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 1.6e-22 111.3 357 26.6
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 2.1e-22 110.9 359 27.3
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 2.1e-22 110.9 353 26.9
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 2.7e-22 110.5 360 26.1
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 4.6e-22 109.8 357 26.3
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 6.0e-22 109.4 355 26.5
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 1.8e-21 107.8 356 25.6
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 1.8e-21 107.8 349 26.6
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 1.8e-21 107.8 335 25.7
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 1.8e-21 107.8 342 26.9
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 2.3e-21 107.5 356 25.8
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 3.0e-21 107.1 265 28.3
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 3.9e-21 106.7 352 25.9
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 5.1e-21 106.3 352 27.3
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 1.1e-20 105.1 355 26.5
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 1.9e-20 104.4 351 26.5
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 2.5e-20 104.0 351 26.5
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 7.4e-20 102.4 344 27.0
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 7.4e-20 102.4 361 26.3
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 7.4e-20 102.4 365 26.8
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 9.6e-20 102.1 364 26.4
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 1.6e-19 101.3 355 26.2
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 2.1e-19 100.9 361 26.0
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 2.1e-19 100.9 358 24.9
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 2.1e-19 100.9 356 24.7
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 2.1e-19 100.9 360 25.0
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 3.7e-19 100.1 355 25.9
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 4.8e-19 99.8 355 26.2
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 4.8e-19 99.8 309 26.9
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 9.0e-18 95.5 359 24.0
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 9.0e-18 95.5 338 26.0
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 9.0e-18 95.5 294 27.6
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 1.2e-17 95.1 355 23.7
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.5e-17 94.7 342 24.9
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 5.8e-17 92.8 385 24.2
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 5.8e-17 92.8 315 25.1
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 7.6e-17 92.4 360 25.3
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 2.2e-16 90.9 358 25.1
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 2.9e-16 90.5 249 29.7
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 3.8e-16 90.1 354 24.0
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 3.8e-16 90.1 269 27.1
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.1e-15 88.6 354 23.7
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 7.1e-15 85.9 226 26.5
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 1.2e-14 85.1 355 25.1
BcaNung02135 Brassica carinata HOM05D005013 ORTHO05D006005 1.1e-12 78.6 222 27.0
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 7.4e-12 75.9 204 26.5
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 4.8e-11 73.2 224 27.7
AL2G41840 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 5.9e-09 66.2 203 26.1


User provided reference genes

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