Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI18_g07895_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 8.4e-221 770.0 377 100.0
MBI18_g19140_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 1.3e-192 676.4 378 88.4
MBI18_g23508_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 4.7e-187 657.9 378 86.8
TAR624G1196 Trochodendron aralioides HOM05D001891 ORTHO05D005832 1.7e-125 453.4 353 62.6
Dinv39687 Davidia involucrata HOM05D001891 ORTHO05D005832 1.6e-123 446.8 375 57.9
CSS0020073 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D005832 6.2e-123 444.9 374 57.5
Nn1g03668 Nelumbo nucifera HOM05D001891 ORTHO05D005832 2.0e-121 439.9 375 59.2
Cfa014439 Carpinus fangiana HOM05D001891 ORTHO05D005832 1.9e-119 433.3 375 57.1
QL08p033823 Quercus lobata HOM05D001891 ORTHO05D005832 9.3e-119 431.0 381 56.7
PSO541G2722 Papaver somniferum HOM05D001891 ORTHO05D005832 1.6e-118 430.3 376 58.0
Aqoxy4G02100 Aquilegia oxysepala HOM05D001891 ORTHO05D005832 2.7e-118 429.5 376 57.2
CiPaw.03G162900 Carya illinoinensis HOM05D001891 ORTHO05D005832 3.5e-118 429.1 375 57.1
CDE01G0775 Ceratophyllum demersum HOM05D001891 ORTHO05D005832 3.0e-117 426.0 342 59.4
Ciclev10015025m.g Citrus clementina HOM05D001891 ORTHO05D005832 2.1e-115 419.9 375 56.3
Actinidia12502 Actinidia chinensis HOM05D001891 ORTHO05D005832 4.8e-115 418.7 375 54.7
Haze_12897 Corylus avellana HOM05D001891 ORTHO05D005832 1.4e-114 417.2 382 54.7
TWI18G0733 Tripterygium wilfordii HOM05D001891 ORTHO05D005832 6.4e-112 408.3 378 54.0
Manes.13G073100 Manihot esculenta HOM05D001891 ORTHO05D005832 1.4e-111 407.1 376 54.3
Thecc.02G162300 Theobroma cacao HOM05D001891 ORTHO05D005832 4.2e-111 405.6 375 55.2
MELO3C019236.2 Cucumis melo HOM05D001891 ORTHO05D005832 9.3e-111 404.4 382 55.5
CsaV3_2G035180 Cucumis sativus L. HOM05D001891 ORTHO05D005832 2.7e-110 402.9 380 55.3
PGR142G2396 Punica granatum HOM05D001891 ORTHO05D005832 9.6e-108 394.4 375 52.5
Solyc07g052570.4 Solanum lycopersicum HOM05D001891 ORTHO05D005832 2.1e-107 393.3 375 53.9
ClCG02G008450 Citrullus lanatus HOM05D001891 ORTHO05D005832 3.6e-107 392.5 381 54.3
ATR0804G013 Amborella trichopoda HOM05D001891 ORTHO05D005832 2.4e-106 389.8 370 55.1
Sopen07g026180 Solanum pennellii HOM05D001891 ORTHO05D005832 2.4e-106 389.8 392 52.3
Atru.chr6.3148 Acer truncatum HOM05D001891 ORTHO05D005832 3.1e-106 389.4 380 53.2
Duzib052G0092 Durio zibethinus HOM05D001891 ORTHO05D005832 5.3e-106 388.7 378 52.6
Rhsim06G0158100 Rhododendron simsii HOM05D001891 ORTHO05D005832 1.5e-105 387.1 348 54.0
Psat5g265280 Pisum sativum HOM05D001891 ORTHO05D005832 3.4e-105 386.0 375 53.3
vmacro12227 Vaccinium macrocarpon HOM05D001891 ORTHO05D005832 3.4e-105 386.0 313 59.1
Glyma.12G195700 Glycine max HOM05D001891 ORTHO05D005832 3.8e-104 382.5 373 53.6
GSVIVG01030624001 Vitis vinifera HOM05D001891 ORTHO05D005832 6.4e-104 381.7 375 53.6
Cc05_g05050 Coffea canephora HOM05D001891 ORTHO05D005832 3.5e-102 375.9 377 50.4
SalBow7G4184 Salvia bowleyana HOM05D001891 ORTHO05D005832 3.9e-101 372.5 379 51.2
THA.LOC104821752 Tarenaya hassleriana HOM05D001891 ORTHO05D005832 3.9e-101 372.5 375 51.2
TPR.G4158 Trifolium pratense HOM05D001891 ORTHO05D005832 6.7e-101 371.7 375 51.5
Migut.M00395 Erythranthe guttata HOM05D001891 ORTHO05D005832 1.5e-100 370.5 375 51.7
Eucgr.K00860 Eucalyptus grandis HOM05D001891 ORTHO05D005832 1.9e-100 370.2 375 49.1
Ah.15g093450 Amaranthus hybridus HOM05D001891 ORTHO05D005832 2.5e-100 369.8 375 50.9
Medtr2g088820 Medicago truncatula HOM05D001891 ORTHO05D005832 2.5e-100 369.8 377 50.9
VMungo1080G1248 Vigna mungo HOM05D001891 ORTHO05D005832 4.3e-100 369.0 375 52.0
Gorai.002G016300 Gossypium raimondii HOM05D001891 ORTHO05D005832 5.6e-100 368.6 378 51.3
MD09G1105100 Malus domestica HOM05D001891 ORTHO05D005832 7.4e-100 368.2 380 50.3
Eucgr.K00822 Eucalyptus grandis HOM05D001891 ORTHO05D005832 9.6e-100 367.9 375 49.3
Sc12g0002380 Simmondsia chinensis HOM05D001891 ORTHO05D005832 1.3e-99 367.5 342 55.0
EL10Ac7g17313 Beta vulgaris HOM05D001891 ORTHO05D005832 1.6e-99 367.1 375 51.2
Gohir.A01G013300 Gossypium hirsutum HOM05D001891 ORTHO05D005832 6.2e-99 365.2 378 51.3
Phvul.005G113700 Phaseolus vulgaris HOM05D001891 ORTHO05D005832 6.2e-99 365.2 376 52.4
CANSAT64G2761 Cannabis sativa HOM05D001891 ORTHO05D005832 1.1e-98 364.4 366 52.7
Gohir.D01G014600 Gossypium hirsutum HOM05D001891 ORTHO05D005832 1.8e-98 363.6 377 50.7
Oeu041941.2 Olea europaea HOM05D001891 ORTHO05D005832 3.1e-98 362.8 341 53.1
arahy.Tifrunner.gnm1.ann1.XAPR04 Arachis hypogaea HOM05D001891 ORTHO05D005832 4.0e-98 362.5 382 49.7
Prupe.3G220400 Prunus persica HOM05D001891 ORTHO05D005832 4.0e-98 362.5 376 51.6
Peaxi162Scf00007g01229 Petunia axillaris HOM05D001891 ORTHO05D005832 5.3e-98 362.1 409 47.9
arahy.Tifrunner.gnm1.ann1.IG5XIH Arachis hypogaea HOM05D001891 ORTHO05D005832 6.9e-98 361.7 382 49.5
Potri.017G038700 Populus trichocarpa HOM05D001891 ORTHO05D005832 6.9e-98 361.7 373 50.1
Os04g0629100 Oryza sativa ssp. japonica HOM05D001891 ORTHO05D005832 1.3e-96 357.5 376 49.2
Sp3g19820 Schrenkiella parvula HOM05D001891 ORTHO05D005832 2.9e-96 356.3 375 50.7
AL3G35970 Arabidopsis lyrata HOM05D001891 ORTHO05D005832 8.4e-96 354.8 374 51.1
Sabra17G0025700 Salix brachista HOM05D001891 ORTHO05D005832 8.4e-96 354.8 371 49.9
RcHm_v2.0_Chr2g0160071 Rosa chinensis HOM05D001891 ORTHO05D005832 1.1e-95 354.4 375 48.8
COL.COLO4_12984 Corchorus olitorius HOM05D001891 ORTHO05D005832 1.9e-95 353.6 343 53.4
Carub.0003s2190 Capsella rubella HOM05D001891 ORTHO05D005832 4.2e-95 352.4 374 50.0
ECA238G0562 Erigeron canadensis HOM05D001891 ORTHO05D005832 4.2e-95 352.4 378 49.5
CAN.G921.8 Capsicum annuum HOM05D001891 ORTHO05D005832 7.1e-95 351.7 315 57.5
Thhalv10020639m.g Eutrema salsugineum HOM05D001891 ORTHO05D005832 2.1e-94 350.1 379 50.1
Eucgr.K00839 Eucalyptus grandis HOM05D001891 ORTHO05D005832 2.7e-94 349.7 339 49.3
Lalb_Chr24g0393071 Lupinus albus HOM05D001891 ORTHO05D005832 2.7e-94 349.7 376 49.5
Lj3g0012140 Lotus japonicus HOM05D001891 ORTHO05D005832 4.6e-94 349.0 377 49.1
Aa31LG8G8410 Aethionema arabicum HOM05D001891 ORTHO05D005832 1.8e-93 347.1 339 54.9
Zm00001eb069580 Zea mays HOM05D001891 ORTHO05D005832 6.7e-93 345.1 373 49.9
AT3G21820 Arabidopsis thaliana HOM05D001891 ORTHO05D005832 8.7e-93 344.7 371 51.2
HanXRQChr10g0297501 Helianthus annuus HOM05D001891 ORTHO05D005832 4.3e-92 342.4 377 48.0
FAN09G1075 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.6e-91 340.5 375 49.6
CARHR097810 Cardamine hirsuta HOM05D001891 ORTHO05D005832 4.8e-91 339.0 363 50.4
MBI18_g17390_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 6.3e-91 338.6 176 93.2
Nitab4.5_0001176g0150 Nicotiana tabacum HOM05D001891 ORTHO05D005832 1.1e-90 337.8 313 55.6
C05p41560 Brassica napus HOM05D001891 ORTHO05D005832 1.8e-90 337.0 378 47.9
BolC5t32893H Brassica oleracea HOM05D001891 ORTHO05D005832 1.8e-90 337.0 378 47.9
BcaC05g28122 Brassica carinata HOM05D001891 ORTHO05D005832 1.2e-89 334.3 379 48.0
AL3G35980 Arabidopsis lyrata HOM05D001891 ORTHO05D005832 3.4e-89 332.8 346 50.9
unitig_26.g9659 Utricularia gibba HOM05D001891 ORTHO05D005832 8.5e-88 328.2 379 45.9
SGA_v2.0_scaffold70G23419 Striga asiatica HOM05D001891 ORTHO05D005832 6.1e-86 322.0 329 50.2
A05p26920 Brassica napus HOM05D001891 ORTHO05D005832 1.0e-85 321.2 339 49.9
BraA05t21572Z Brassica rapa HOM05D001891 ORTHO05D005832 1.0e-85 321.2 339 49.9
FAN02G0497 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.1e-84 317.8 402 45.5
FAN05G1073 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.1e-84 317.8 373 48.0
BcaB06g26287 Brassica carinata HOM05D001891 ORTHO05D005832 2.4e-82 310.1 363 45.7
AUR62040522 Chenopodium quinoa HOM05D001891 ORTHO05D005832 2.4e-82 310.1 302 53.0
Sed0014701 Sechium edule HOM05D001891 ORTHO05D005832 9.0e-82 308.1 290 55.5
Cpa.g.sc8.235 Carica papaya HOM05D001891 ORTHO05D005832 8.5e-80 301.6 375 45.1
Hund01107 Selenicereus undatus HOM05D001891 ORTHO05D005832 6.7e-77 292.0 304 49.7
Glyma.13G306800 Glycine max HOM05D001891 ORTHO05D005832 3.1e-74 283.1 364 44.2
DCAR_012957 Daucus carota HOM05D001891 ORTHO05D005832 4.4e-68 262.7 264 52.3
FAN14G5299 Fragaria x ananassa HOM05D001891 ORTHO05D005832 4.4e-68 262.7 280 50.4
MBI18_g41692_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 5.7e-68 262.3 139 92.1
Eucgr.K00819 Eucalyptus grandis HOM05D001891 ORTHO05D005832 1.4e-66 257.7 296 47.0
Mapoly0057s0093 Marchantia polymorpha HOM05D001891 ORTHO05D005832 1.2e-65 254.6 343 42.3
Eucgr.K00818 Eucalyptus grandis HOM05D001891 ORTHO05D005832 2.9e-64 250.0 310 42.3
Pp3c13_21910 Physcomitrium patens HOM05D001891 ORTHO05D005832 8.0e-62 241.9 368 38.9
Aqoxy4G02096 Aquilegia oxysepala HOM05D001891 ORTHO05D005832 2.6e-60 236.9 195 59.0
Nitab4.5_0005894g0040 Nicotiana tabacum HOM05D001891 ORTHO05D005832 1.6e-57 227.6 341 40.5
HPP92_009396 Vanilla planifolia HOM05D001891 ORTHO05D005832 1.2e-52 211.5 341 36.4
Eucgr.K00824 Eucalyptus grandis HOM05D001891 ORTHO05D005832 7.5e-52 208.8 373 34.0
SMO167G0005 Selaginella moellendorffii HOM05D001891 ORTHO05D005832 1.8e-50 204.1 316 40.2
Lj8A122T61 Lonicera japonica HOM05D001891 ORTHO05D005832 5.9e-49 199.1 173 58.4
SMO347G0022 Selaginella moellendorffii HOM05D001891 ORTHO05D005832 1.0e-48 198.4 347 38.3
HPP92_009391 Vanilla planifolia HOM05D001891 ORTHO05D005832 2.9e-48 196.8 162 58.6
FvH4_6g43540 Fragaria vesca HOM05D001891 ORTHO05D005832 1.8e-45 187.6 165 57.0
MCO06G294 Micromonas commoda HOM05D001891 ORTHO05D005832 3.3e-39 166.8 389 30.8
Cre01.g041100 Chlamydomonas reinhardtii HOM05D001891 ORTHO05D005832 8.9e-37 158.7 427 28.1
Psat6g077080 Pisum sativum HOM05D001891 ORTHO05D005832 1.1e-31 141.7 141 53.2
Psat6g077120 Pisum sativum HOM05D001891 ORTHO05D005832 1.1e-31 141.7 141 53.2
ATR0008G001 Amborella trichopoda HOM05D001891 ORTHO05D005832 3.0e-24 117.1 141 48.2
DCAR_012956 Daucus carota HOM05D001891 ORTHO05D005832 9.5e-23 112.1 78 65.4
Psat1g072160 Pisum sativum HOM05D002713 ORTHO05D008299 4.7e-22 109.8 85 62.4
Atru.chr8.690 Acer truncatum HOM05D001891 ORTHO05D005832 8.1e-22 109.0 114 50.9
SEGI_29039 Sequoiadendron giganteum HOM05D001891 ORTHO05D005832 3.1e-21 107.1 133 44.4
SEGI_20287 Sequoiadendron giganteum HOM05D001891 ORTHO05D005832 1.6e-17 94.7 115 40.9
MBI09_g25176_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.3e-16 91.7 43 97.7
MBI02_g40253_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 2.3e-16 90.9 49 85.7
MBI03_g41360_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 3.0e-16 90.5 43 95.3
Glyma.13G037950 Glycine max HOM05D001891 ORTHO05D005832 6.6e-16 89.4 162 35.8
Psat0s4720g0040 Pisum sativum HOM05D001891 ORTHO05D005832 6.6e-16 89.4 70 58.6
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 1.9e-15 87.8 118 42.4
PGSC0003DMG400026174 Solanum tuberosum HOM05D001891 ORTHO05D005832 5.6e-15 86.3 70 60.0
AL5G18570 Arabidopsis lyrata HOM05D001891 ORTHO05D005832 9.9e-12 75.5 46 67.4
arahy.Tifrunner.gnm1.ann1.WYE7TV Arachis hypogaea HOM05D003444 ORTHO05D003963 7.1e-10 69.3 147 34.0
arahy.Tifrunner.gnm1.ann1.Q3H55W Arachis hypogaea HOM05D003444 ORTHO05D003963 4.6e-09 66.6 112 36.6
arahy.Tifrunner.gnm1.ann1.J663RV Arachis hypogaea HOM05D002828 ORTHO05D003457 8.6e-08 62.4 133 32.3
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea HOM05D003636 ORTHO05D005832 3.3e-07 60.5 86 39.5


User provided reference genes

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