Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g33212_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D048557 8.6e-116 420.6 260 100.0
MBI16_g28239_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 4.9e-87 325.1 224 96.4
TAR629G1872 Trochodendron aralioides HOM05D003928 ORTHO05D007133 8.5e-39 164.9 167 62.9
Cpa.g.sc3.486 Carica papaya HOM05D003928 ORTHO05D007133 3.0e-36 156.4 166 58.4
Sabra15G0040100 Salix brachista HOM05D003928 ORTHO05D007133 5.2e-36 155.6 233 48.9
Thecc.03G037800 Theobroma cacao HOM05D003928 ORTHO05D007133 2.0e-35 153.7 229 51.5
Aqoxy3G00241 Aquilegia oxysepala HOM05D003928 ORTHO05D007133 7.5e-35 151.8 228 61.4
CiPaw.16G051800 Carya illinoinensis HOM05D003928 ORTHO05D007133 6.3e-34 148.7 232 50.9
Potri.015G045600 Populus trichocarpa HOM05D003928 ORTHO05D007133 6.3e-34 148.7 167 55.1
Cfa019749 Carpinus fangiana HOM05D003928 ORTHO05D007133 1.8e-33 147.1 232 46.1
GSVIVG01008318001 Vitis vinifera HOM05D003928 ORTHO05D007133 1.8e-33 147.1 168 58.3
Atru.chr9.882 Acer truncatum HOM05D003928 ORTHO05D007133 1.6e-32 144.1 232 51.3
Actinidia02661 Actinidia chinensis HOM05D003928 ORTHO05D007133 1.6e-32 144.1 235 44.3
Ca_25458_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 2.0e-32 143.7 229 48.0
Ca_25459_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 2.0e-32 143.7 229 47.6
PSO478G2973 Papaver somniferum HOM05D003928 ORTHO05D007133 3.5e-32 142.9 156 54.5
CiPaw.16G088000 Carya illinoinensis HOM05D003928 ORTHO05D007133 5.9e-32 142.1 235 49.8
Ciclev10018705m.g Citrus clementina HOM05D003928 ORTHO05D007133 5.9e-32 142.1 167 55.7
Rhsim08G0131700 Rhododendron simsii HOM05D003928 ORTHO05D007133 5.9e-32 142.1 169 55.6
TWI15G0374 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 7.7e-32 141.7 232 47.4
Duzib084G0756 Durio zibethinus HOM05D003928 ORTHO05D007133 1.0e-31 141.4 230 47.4
TWI81G1044 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 1.0e-31 141.4 235 50.2
Sabra12G0038700 Salix brachista HOM05D003928 ORTHO05D007133 1.3e-31 141.0 243 44.0
Haze_18702 Corylus avellana HOM05D003928 ORTHO05D007133 1.7e-31 140.6 138 60.9
Dinv15697 Davidia involucrata HOM05D003928 ORTHO05D007133 2.3e-31 140.2 167 56.3
Lalb_Chr24g0397881 Lupinus albus HOM05D003928 ORTHO05D007133 2.3e-31 140.2 228 43.9
PSO017G5964 Papaver somniferum HOM05D003928 ORTHO05D007133 8.6e-31 138.3 156 53.2
Prupe.5G223200 Prunus persica HOM05D003928 ORTHO05D007133 1.1e-30 137.9 232 46.1
CSS0042498 Camellia sinensis var. sinensis HOM05D003928 ORTHO05D007133 3.3e-30 136.3 232 48.7
Potri.012G055000 Populus trichocarpa HOM05D003928 ORTHO05D007133 4.2e-30 136.0 170 55.3
Cc04_g07000 Coffea canephora HOM05D003928 ORTHO05D007133 5.5e-30 135.6 233 41.2
vmacro17703 Vaccinium macrocarpon HOM05D003928 ORTHO05D007133 5.5e-30 135.6 232 47.0
Duzib068G1360 Durio zibethinus HOM05D003928 ORTHO05D007133 1.2e-29 134.4 231 46.8
RcHm_v2.0_Chr7g0185741 Rosa chinensis HOM05D003928 ORTHO05D007133 1.2e-29 134.4 228 46.5
COL.COLO4_05244 Corchorus olitorius HOM05D003928 ORTHO05D007133 1.6e-29 134.0 231 56.7
Eucgr.K02232 Eucalyptus grandis HOM05D003928 ORTHO05D007133 2.1e-29 133.7 228 43.9
Nitab4.5_0008233g0010 Nicotiana tabacum HOM05D003928 ORTHO05D007133 4.7e-29 132.5 152 55.3
Nitab4.5_0003433g0050 Nicotiana tabacum HOM05D003928 ORTHO05D007133 6.1e-29 132.1 152 55.9
QL10p025782 Quercus lobata HOM05D003928 ORTHO05D007133 8.0e-29 131.7 167 54.5
Gorai.008G287400 Gossypium raimondii HOM05D003928 ORTHO05D007133 1.0e-28 131.3 136 61.0
TPR.G32710 Trifolium pratense HOM05D003928 ORTHO05D007133 1.4e-28 131.0 228 49.1
FAN08G0705 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.8e-28 130.6 229 45.4
Duzib205G0965 Durio zibethinus HOM05D003928 ORTHO05D007133 2.3e-28 130.2 231 44.2
Lj5A151T51 Lonicera japonica HOM05D003928 ORTHO05D007133 2.3e-28 130.2 224 43.3
Sed0028203 Sechium edule HOM05D003928 ORTHO05D007133 2.3e-28 130.2 155 54.2
Gohir.D12G267400 Gossypium hirsutum HOM05D003928 ORTHO05D007133 4.0e-28 129.4 136 60.3
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 4.0e-28 129.4 165 50.3
Peaxi162Scf00683g00003 Petunia axillaris HOM05D003928 ORTHO05D007133 5.2e-28 129.0 239 41.4
CAN.G1425.25 Capsicum annuum HOM05D003928 ORTHO05D007133 6.8e-28 128.6 167 53.3
Solyc03g119270.1 Solanum lycopersicum HOM05D003928 ORTHO05D007133 6.8e-28 128.6 133 58.6
CsaV3_1G006710 Cucumis sativus L. HOM05D003928 ORTHO05D007133 8.9e-28 128.3 162 51.2
FvH4_5g11850 Fragaria vesca HOM05D003928 ORTHO05D007133 1.5e-27 127.5 229 45.0
FAN18G3471 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.5e-27 127.5 229 45.0
Medtr8g104380 Medicago truncatula HOM05D003928 ORTHO05D007133 1.5e-27 127.5 232 41.4
MELO3C002096.2 Cucumis melo HOM05D003928 ORTHO05D007133 4.4e-27 125.9 158 51.9
FAN13G0494 Fragaria x ananassa HOM05D003928 ORTHO05D007133 4.4e-27 125.9 227 43.6
Glyma.05G237400 Glycine max HOM05D003928 ORTHO05D007133 4.4e-27 125.9 231 45.5
Sopen03g038150 Solanum pennellii HOM05D003928 ORTHO05D007133 4.4e-27 125.9 232 42.7
ClCG00G001070 Citrullus lanatus HOM05D003928 ORTHO05D007133 5.7e-27 125.6 147 53.7
ClCG04G011000 Citrullus lanatus HOM05D003928 ORTHO05D007133 5.7e-27 125.6 147 53.7
PGSC0003DMG400005647 Solanum tuberosum HOM05D003928 ORTHO05D007133 5.7e-27 125.6 129 58.9
MD14G1228200 Malus domestica HOM05D003928 ORTHO05D007133 7.5e-27 125.2 232 44.8
FAN18G2650 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.3e-26 124.4 229 44.5
VMungo0251G0737 Vigna mungo HOM05D003928 ORTHO05D007133 1.3e-26 124.4 229 41.0
Gohir.A12G266900 Gossypium hirsutum HOM05D003928 ORTHO05D007133 3.7e-26 122.9 138 59.4
Lj6g0007940 Lotus japonicus HOM05D003928 ORTHO05D007133 3.7e-26 122.9 229 42.8
ATR1125G015 Amborella trichopoda HOM05D003928 ORTHO05D007133 8.3e-26 121.7 168 48.8
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea HOM05D003928 ORTHO05D007133 8.3e-26 121.7 157 51.0
HanXRQChr17g0558301 Helianthus annuus HOM05D003928 ORTHO05D007133 2.4e-25 120.2 137 55.5
Manes.05G124730 Manihot esculenta HOM05D003928 ORTHO05D007133 2.4e-25 120.2 167 50.9
ECA233G2967 Erigeron canadensis HOM05D003928 ORTHO05D007133 3.1e-25 119.8 230 43.9
SGA_v2.0_scaffold25G10975 Striga asiatica HOM05D003928 ORTHO05D007133 9.2e-25 118.2 154 51.3
Psat7g010840 Pisum sativum HOM05D003928 ORTHO05D007133 1.2e-24 117.9 231 42.4
Hund10276 Selenicereus undatus HOM05D003928 ORTHO05D007133 2.0e-24 117.1 164 49.4
MD06G1218100 Malus domestica HOM05D003928 ORTHO05D007133 7.8e-24 115.2 232 42.7
CANSAT80G1256 Cannabis sativa HOM05D003928 ORTHO05D007133 1.7e-23 114.0 228 41.7
PGR044G0175 Punica granatum HOM05D003928 ORTHO05D007133 2.9e-23 113.2 229 41.5
HPP92_023134 Vanilla planifolia HOM05D003928 ORTHO05D007133 2.9e-23 113.2 167 46.1
Sc04g0003430 Simmondsia chinensis HOM05D003928 ORTHO05D007133 1.5e-22 110.9 167 49.7
EL10Ac4g08652 Beta vulgaris HOM05D003928 ORTHO05D007133 2.5e-22 110.2 178 46.6
AUR62029899 Chenopodium quinoa HOM05D003928 ORTHO05D007133 2.5e-22 110.2 166 47.0
AUR62033807 Chenopodium quinoa HOM05D003928 ORTHO05D007133 2.5e-22 110.2 175 45.7
Ah.15g090400 Amaranthus hybridus HOM05D003928 ORTHO05D007133 4.3e-22 109.4 152 53.3
DCAR_023214 Daucus carota HOM05D003928 ORTHO05D007133 5.6e-22 109.0 230 39.6
SEGI_11458 Sequoiadendron giganteum HOM05D003928 ORTHO05D048557 5.6e-22 109.0 138 44.2
Lsat_1_v5_gn_8_145181 Lactuca sativa HOM05D003928 ORTHO05D007133 7.3e-22 108.6 169 45.0
SEGI_04687 Sequoiadendron giganteum HOM05D003928 ORTHO05D007133 1.6e-21 107.5 114 48.2
Migut.I00406 Erythranthe guttata HOM05D003928 ORTHO05D007133 2.3e-20 103.6 116 55.2
CDE04G1035 Ceratophyllum demersum HOM05D003928 ORTHO05D007133 5.2e-20 102.4 167 44.3
Actinidia19834 Actinidia chinensis HOM05D003928 ORTHO05D007133 2.9e-18 96.7 73 68.5
THA.LOC104820383 Tarenaya hassleriana HOM05D003928 ORTHO05D007133 1.8e-17 94.0 135 50.4
Nn6g34767 Nelumbo nucifera HOM05D003928 ORTHO05D007133 4.6e-16 89.4 68 64.7
Glyma.08G044600 Glycine max HOM05D003928 ORTHO05D007133 3.9e-15 86.3 149 40.9
Os01g0512200 Oryza sativa ssp. japonica HOM05D003928 ORTHO05D007133 2.1e-13 80.5 219 32.9
Zm00001eb410080 Zea mays HOM05D003928 ORTHO05D007133 3.6e-13 79.7 219 34.7
Carub.0001s3791 Capsella rubella HOM05D003928 ORTHO05D007133 1.2e-11 74.7 109 46.8
Aa31LG8G5140 Aethionema arabicum HOM05D003928 ORTHO05D007133 1.5e-11 74.3 123 43.9
Mapoly0001s0514 Marchantia polymorpha HOM05D003928 ORTHO05D007133 1.5e-11 74.3 167 35.3
Sp3g16410 Schrenkiella parvula HOM05D003928 ORTHO05D007133 2.0e-11 73.9 144 41.7
Zm00001eb137140 Zea mays HOM05D003928 ORTHO05D007133 2.0e-11 73.9 228 31.6
Sp1g35680 Schrenkiella parvula HOM05D003928 ORTHO05D007133 5.8e-11 72.4 151 40.4
BcaC05g27555 Brassica carinata HOM05D003928 ORTHO05D007133 2.2e-10 70.5 120 43.3
C05p35390 Brassica napus HOM05D003928 ORTHO05D007133 2.2e-10 70.5 120 43.3
AT1G48760 Arabidopsis thaliana HOM05D003928 ORTHO05D007133 2.9e-10 70.1 119 42.9
Aa31LG10G4780 Aethionema arabicum HOM05D003928 ORTHO05D007133 1.1e-09 68.2 115 43.5
AL1G55480 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 2.4e-09 67.0 134 41.0
CARHR038730 Cardamine hirsuta HOM05D003928 ORTHO05D007133 7.0e-09 65.5 130 40.0
Thhalv10020046m.g Eutrema salsugineum HOM05D003928 ORTHO05D007133 1.6e-08 64.3 120 40.8
CAN.G1129.1 Capsicum annuum HOM05D003928 ORTHO05D007133 6.0e-08 62.4 89 50.6
A05p20900 Brassica napus HOM05D003928 ORTHO05D007133 1.7e-07 60.8 116 40.5
BraA05t20995Z Brassica rapa HOM05D003928 ORTHO05D007133 1.7e-07 60.8 116 40.5
AagrBONN_evm.TU.Sc2ySwM_368.2497 Anthoceros agrestis HOM05D003928 ORTHO05D007133 7.3e-06 55.5 143 34.3
Pp3c5_28670 Physcomitrium patens HOM05D003928 ORTHO05D007133 7.3e-06 55.5 136 35.3


User provided reference genes

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