Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g07670_MAGBIO Magnolia biondii HOM05D003747 ORTHO05D005080 0.0e+00 1351.7 795 100.0
TAR376G0643 Trochodendron aralioides HOM05D003747 ORTHO05D005080 2.1e-253 879.4 802 69.0
MBI05_g04846_MAGBIO Magnolia biondii HOM05D003747 ORTHO05D005080 9.1e-209 731.1 783 59.9
Aqoxy6G02380 Aquilegia oxysepala HOM05D003747 ORTHO05D005080 3.6e-205 719.2 797 61.0
SEGI_05010 Sequoiadendron giganteum HOM05D003747 ORTHO05D005080 4.0e-204 715.7 833 55.8
Rhsim06G0026300 Rhododendron simsii HOM05D003747 ORTHO05D005080 1.5e-203 713.8 792 57.7
Hma1.2p1_1386F.1_g279810 Hydrangea macrophylla HOM05D003747 ORTHO05D005080 4.9e-202 708.8 794 58.4
PSO541G0570 Papaver somniferum HOM05D003747 ORTHO05D005080 6.3e-202 708.4 789 57.4
TAR376G0166 Trochodendron aralioides HOM05D003747 ORTHO05D005080 5.4e-201 705.3 786 58.1
Sabra05G0181100 Salix brachista HOM05D003747 ORTHO05D005080 2.0e-200 703.4 792 61.1
Glyma.20G084100 Glycine max HOM05D003747 ORTHO05D005080 2.7e-200 703.0 798 61.9
VMungo0720G2667 Vigna mungo HOM05D003747 ORTHO05D005080 2.7e-200 703.0 793 60.8
Glyma.10G132800 Glycine max HOM05D003747 ORTHO05D005080 3.5e-200 702.6 794 61.1
Psat0s1558g0040 Pisum sativum HOM05D003747 ORTHO05D005080 4.5e-200 702.2 792 61.5
Medtr1g045490 Medicago truncatula HOM05D003747 ORTHO05D005080 7.7e-200 701.4 791 61.3
ClCG05G018570 Citrullus lanatus HOM05D003747 ORTHO05D005080 1.0e-199 701.0 798 61.0
ATR0620G056 Amborella trichopoda HOM05D003747 ORTHO05D005080 1.3e-199 700.7 794 60.3
MELO3C024651.2 Cucumis melo HOM05D003747 ORTHO05D005080 1.7e-199 700.3 798 61.0
PSO675G4036 Papaver somniferum HOM05D003747 ORTHO05D005080 1.7e-199 700.3 796 57.0
Prupe.1G370600 Prunus persica HOM05D003747 ORTHO05D005080 2.3e-199 699.9 793 62.0
TPR.G16935 Trifolium pratense HOM05D003747 ORTHO05D005080 2.3e-199 699.9 799 61.6
Phvul.007G231400 Phaseolus vulgaris HOM05D003747 ORTHO05D005080 2.9e-199 699.5 793 60.7
Potri.005G234900 Populus trichocarpa HOM05D003747 ORTHO05D005080 5.0e-199 698.7 797 60.9
Potri.002G027900 Populus trichocarpa HOM05D003747 ORTHO05D005080 6.6e-199 698.4 791 61.1
Lalb_Chr19g0128511 Lupinus albus HOM05D003747 ORTHO05D005080 2.5e-198 696.4 791 60.6
MD08G1018000 Malus domestica HOM05D003747 ORTHO05D005080 7.2e-198 694.9 792 61.1
Ca_11895_v3 Cicer arietinum L. HOM05D003747 ORTHO05D005080 9.5e-198 694.5 799 61.6
Ca_30287_v3 Cicer arietinum L. HOM05D003747 ORTHO05D005080 9.5e-198 694.5 799 61.6
Zm00001eb398060 Zea mays HOM05D003747 ORTHO05D005080 1.6e-197 693.7 822 56.7
Ciclev10000324m.g Citrus clementina HOM05D003747 ORTHO05D005080 2.8e-197 693.0 792 61.0
arahy.Tifrunner.gnm1.ann1.VC055M Arachis hypogaea HOM05D003747 ORTHO05D005080 4.7e-197 692.2 799 60.8
Sabra02G0022000 Salix brachista HOM05D003747 ORTHO05D005080 4.7e-197 692.2 790 60.8
arahy.Tifrunner.gnm1.ann1.K8KKRC Arachis hypogaea HOM05D003747 ORTHO05D005080 8.0e-197 691.4 799 60.7
RcHm_v2.0_Chr6g0302151 Rosa chinensis HOM05D003747 ORTHO05D005080 8.0e-197 691.4 793 60.5
COL.COLO4_26196 Corchorus olitorius HOM05D003747 ORTHO05D005080 1.4e-196 690.6 791 60.4
Lj6g0007889 Lotus japonicus HOM05D003747 ORTHO05D005080 1.4e-196 690.6 797 60.4
CiPaw.07G154200 Carya illinoinensis HOM05D003747 ORTHO05D005080 1.8e-196 690.3 792 59.8
CANSAT25G1149 Cannabis sativa HOM05D003747 ORTHO05D005080 2.3e-196 689.9 793 60.5
Atru.chr13.357 Acer truncatum HOM05D003747 ORTHO05D005080 6.8e-196 688.3 794 60.6
FvH4_2g39050 Fragaria vesca HOM05D003747 ORTHO05D005080 6.8e-196 688.3 792 60.7
Manes.05G152300 Manihot esculenta HOM05D003747 ORTHO05D005080 6.8e-196 688.3 798 60.0
Sp1g04000 Schrenkiella parvula HOM05D003747 ORTHO05D005080 6.8e-196 688.3 795 59.5
SpUn0024_0140 Schrenkiella parvula HOM05D003747 ORTHO05D005080 6.8e-196 688.3 795 59.5
DCAR_022445 Daucus carota HOM05D003747 ORTHO05D005080 2.0e-195 686.8 798 60.2
Eucgr.F01620 Eucalyptus grandis HOM05D003747 ORTHO05D005080 2.0e-195 686.8 795 59.9
Oeu046245.1 Olea europaea HOM05D003747 ORTHO05D005080 2.6e-195 686.4 796 56.0
Cc10_g02100 Coffea canephora HOM05D003747 ORTHO05D005080 3.4e-195 686.0 791 60.1
FAN15G1267 Fragaria x ananassa HOM05D003747 ORTHO05D005080 3.4e-195 686.0 792 60.4
FAN27G0346 Fragaria x ananassa HOM05D003747 ORTHO05D005080 3.4e-195 686.0 792 60.6
Lalb_Chr03g0036971 Lupinus albus HOM05D003747 ORTHO05D005080 3.4e-195 686.0 792 60.0
Thecc.08G037800 Theobroma cacao HOM05D003747 ORTHO05D005080 3.4e-195 686.0 792 60.7
Manes.18G017800 Manihot esculenta HOM05D003747 ORTHO05D005080 4.4e-195 685.6 792 60.6
Oeu046243.1 Olea europaea HOM05D003747 ORTHO05D005080 4.4e-195 685.6 796 56.0
PGR083G0723 Punica granatum HOM05D003747 ORTHO05D005080 7.5e-195 684.9 803 60.8
CSS0029452 Camellia sinensis var. sinensis HOM05D003747 ORTHO05D005080 9.8e-195 684.5 788 55.3
Haze_22585 Corylus avellana HOM05D003747 ORTHO05D005080 9.8e-195 684.5 789 59.8
Lj4C29T2 Lonicera japonica HOM05D003747 ORTHO05D005080 9.8e-195 684.5 788 60.3
MD15G1017300 Malus domestica HOM05D003747 ORTHO05D005080 9.8e-195 684.5 792 60.4
Oeu047748.1 Olea europaea HOM05D003747 ORTHO05D005080 9.8e-195 684.5 793 56.1
Zm00001eb011630 Zea mays HOM05D003747 ORTHO05D005080 9.8e-195 684.5 813 56.6
THA.LOC104806907 Tarenaya hassleriana HOM05D003747 ORTHO05D005080 2.9e-194 682.9 788 59.0
A10p03680 Brassica napus HOM05D003747 ORTHO05D005080 4.9e-194 682.2 800 59.2
BraA10t42641Z Brassica rapa HOM05D003747 ORTHO05D005080 4.9e-194 682.2 800 59.2
HanXRQChr09g0269391 Helianthus annuus HOM05D003747 ORTHO05D005080 4.9e-194 682.2 797 52.6
Sed0022188 Sechium edule HOM05D003747 ORTHO05D005080 4.9e-194 682.2 799 59.4
Dinv39487 Davidia involucrata HOM05D003747 ORTHO05D005080 6.3e-194 681.8 794 56.7
Thhalv10017699m.g Eutrema salsugineum HOM05D003747 ORTHO05D005080 6.3e-194 681.8 794 59.7
Duzib041G0542 Durio zibethinus HOM05D003747 ORTHO05D005080 1.1e-193 681.0 800 60.5
Carub.0001s0442 Capsella rubella HOM05D003747 ORTHO05D005080 1.4e-193 680.6 797 59.5
CARHR004600 Cardamine hirsuta HOM05D003747 ORTHO05D005080 1.4e-193 680.6 800 59.0
QL02p010745 Quercus lobata HOM05D003747 ORTHO05D005080 1.4e-193 680.6 790 60.4
SGA_v2.0_scaffold326G48749 Striga asiatica HOM05D003747 ORTHO05D005080 1.4e-193 680.6 794 59.1
C05p03390 Brassica napus HOM05D003747 ORTHO05D005080 1.8e-193 680.2 798 58.9
BolC5t29116H Brassica oleracea HOM05D003747 ORTHO05D005080 1.8e-193 680.2 798 58.9
MSTRG.24265 Avicennia marina HOM05D003747 ORTHO05D005080 2.4e-193 679.9 793 58.5
CiPaw.08G062900 Carya illinoinensis HOM05D003747 ORTHO05D005080 4.1e-193 679.1 791 60.2
Hma1.2p1_0773F.1_g216160 Hydrangea macrophylla HOM05D003747 ORTHO05D005080 1.2e-192 677.6 790 55.2
Nitab4.5_0004368g0010 Nicotiana tabacum HOM05D003747 ORTHO05D005080 1.2e-192 677.6 792 59.0
Nitab4.5_0000352g0010 Nicotiana tabacum HOM05D003747 ORTHO05D005080 1.6e-192 677.2 792 58.8
Migut.N03134 Erythranthe guttata HOM05D003747 ORTHO05D005080 2.0e-192 676.8 794 58.8
Gorai.002G125100 Gossypium raimondii HOM05D003747 ORTHO05D005080 2.0e-192 676.8 796 59.3
AT2G32450 Arabidopsis thaliana HOM05D003747 ORTHO05D005080 3.5e-192 676.0 796 58.9
ECA246G3046 Erigeron canadensis HOM05D003747 ORTHO05D005080 7.8e-192 674.9 816 57.7
Gorai.009G196800 Gossypium raimondii HOM05D003747 ORTHO05D005080 1.3e-191 674.1 798 59.9
FAN20G0205 Fragaria x ananassa HOM05D003747 ORTHO05D005080 1.7e-191 673.7 792 60.0
Aa31LG1G19600 Aethionema arabicum HOM05D003747 ORTHO05D005080 2.3e-191 673.3 792 58.6
Sc02g0005230 Simmondsia chinensis HOM05D003747 ORTHO05D005080 2.3e-191 673.3 797 57.0
Cfa013905 Carpinus fangiana HOM05D003747 ORTHO05D005080 2.9e-191 672.9 789 59.2
Gohir.D01G100800 Gossypium hirsutum HOM05D003747 ORTHO05D005080 3.9e-191 672.5 796 59.3
Gohir.D05G191500 Gossypium hirsutum HOM05D003747 ORTHO05D005080 3.9e-191 672.5 798 59.8
Os03g0263900 Oryza sativa ssp. japonica HOM05D003747 ORTHO05D005080 3.9e-191 672.5 819 55.8
Sp4g14820 Schrenkiella parvula HOM05D003747 ORTHO05D005080 3.9e-191 672.5 794 59.1
TWI56G0727 Tripterygium wilfordii HOM05D003747 ORTHO05D005080 3.9e-191 672.5 789 59.9
Gohir.A05G188400 Gossypium hirsutum HOM05D003747 ORTHO05D005080 5.0e-191 672.2 798 59.8
AT1G05150 Arabidopsis thaliana HOM05D003747 ORTHO05D005080 6.6e-191 671.8 801 58.9
Sopen04g034670 Solanum pennellii HOM05D003747 ORTHO05D005080 6.6e-191 671.8 792 59.6
AL1G14910 Arabidopsis lyrata HOM05D003747 ORTHO05D005080 1.1e-190 671.0 797 59.2
CARHR126280 Cardamine hirsuta HOM05D003747 ORTHO05D005080 1.1e-190 671.0 805 58.6
Nitab4.5_0012730g0020 Nicotiana tabacum HOM05D003747 ORTHO05D005080 1.1e-190 671.0 792 59.3
Solyc04g081050.2 Solanum lycopersicum HOM05D003747 ORTHO05D005080 1.9e-190 670.2 796 59.4
AL4G27840 Arabidopsis lyrata HOM05D003747 ORTHO05D005080 3.3e-190 669.5 794 58.4
Peaxi162Scf00287g00127 Petunia axillaris HOM05D003747 ORTHO05D005080 3.3e-190 669.5 796 59.7
Peaxi162Scf00640g00034 Petunia axillaris HOM05D003747 ORTHO05D005080 4.3e-190 669.1 793 59.4
MSTRG.25220 Avicennia marina HOM05D003747 ORTHO05D005080 7.3e-190 668.3 793 56.4
CSS0007586 Camellia sinensis var. sinensis HOM05D003747 ORTHO05D005080 2.1e-189 666.8 762 55.4
Carub.0004s1380 Capsella rubella HOM05D003747 ORTHO05D005080 1.8e-188 663.7 795 57.6
CAN.G851.8 Capsicum annuum HOM05D003747 ORTHO05D005080 1.8e-188 663.7 790 59.4
Aa31LG5G4820 Aethionema arabicum HOM05D003747 ORTHO05D005080 1.3e-186 657.5 794 58.7
Lsat_1_v5_gn_4_116240 Lactuca sativa HOM05D003747 ORTHO05D005080 1.7e-186 657.1 769 56.8
Lsat_1_v5_gn_5_26081 Lactuca sativa HOM05D003747 ORTHO05D005080 1.7e-186 657.1 807 58.4
Cpa.g.sc140.21 Carica papaya HOM05D003747 ORTHO05D005080 2.2e-186 656.8 763 60.3
Duzib116G0012 Durio zibethinus HOM05D003747 ORTHO05D005080 3.7e-186 656.0 797 59.1
EL10Ac1g00554 Beta vulgaris HOM05D003747 ORTHO05D005080 6.4e-186 655.2 786 56.5
TWI12G0622 Tripterygium wilfordii HOM05D003747 ORTHO05D005080 8.3e-186 654.8 789 59.9
BcaNung05933 Brassica carinata HOM05D003747 ORTHO05D005080 2.3e-183 646.7 798 51.5
TAR628G0607 Trochodendron aralioides HOM05D003747 ORTHO05D005080 6.6e-183 645.2 788 56.7
Ah.05g171920 Amaranthus hybridus HOM05D003747 ORTHO05D005080 1.9e-182 643.7 790 56.2
Gohir.A01G113100 Gossypium hirsutum HOM05D003747 ORTHO05D005080 1.9e-182 643.7 768 59.2
Nn5g29219 Nelumbo nucifera HOM05D003747 ORTHO05D005080 1.7e-175 620.5 787 56.5
SHI08097 Sapria himalayana HOM05D003747 ORTHO05D005080 1.5e-174 617.5 794 54.4
Actinidia15389 Actinidia chinensis HOM05D003747 ORTHO05D005080 7.3e-174 615.1 739 58.2
HanXRQChr05g0156281 Helianthus annuus HOM05D003747 ORTHO05D005080 2.1e-173 613.6 810 51.7
Aqoxy5G01483 Aquilegia oxysepala HOM05D003747 ORTHO05D005080 1.5e-171 607.4 791 54.4
Dinv31811 Davidia involucrata HOM05D003747 ORTHO05D005080 2.6e-171 606.7 791 57.3
AUR62014428 Chenopodium quinoa HOM05D003747 ORTHO05D005080 4.4e-171 605.9 787 54.4
AUR62034569 Chenopodium quinoa HOM05D003747 ORTHO05D005080 5.8e-171 605.5 787 54.5
GSVIVG01009826001 Vitis vinifera HOM05D003747 ORTHO05D005080 5.8e-171 605.5 712 60.7
PGSC0003DMG400003764 Solanum tuberosum HOM05D003747 ORTHO05D005080 4.9e-170 602.4 840 52.5
SMO118G0420 Selaginella moellendorffii HOM05D003747 ORTHO05D005080 1.3e-167 594.3 812 51.8
HPP92_006843 Vanilla planifolia HOM05D003747 ORTHO05D005080 2.3e-167 593.6 797 53.5
Nn6g32245 Nelumbo nucifera HOM05D003747 ORTHO05D005080 8.1e-165 585.1 727 60.0
Pp3c1_8310 Physcomitrium patens HOM05D003747 ORTHO05D005080 7.8e-160 568.5 802 53.1
Pp3c2_26690 Physcomitrium patens HOM05D003747 ORTHO05D005080 2.1e-157 560.5 829 52.6
ECA232G3638 Erigeron canadensis HOM05D003747 ORTHO05D005080 2.0e-155 553.9 737 53.3
CSS0038687 Camellia sinensis var. sinensis HOM05D003747 ORTHO05D005080 3.4e-155 553.1 792 54.2
Mapoly0016s0016 Marchantia polymorpha HOM05D003747 ORTHO05D005080 2.4e-153 547.0 824 50.5
CDE02G1942 Ceratophyllum demersum HOM05D003747 ORTHO05D005080 7.9e-152 542.0 780 52.4
unitig_899.g15539 Utricularia gibba HOM05D003747 ORTHO05D005080 1.1e-148 531.6 707 57.1
AagrBONN_evm.TU.Sc2ySwM_228.5529 Anthoceros agrestis HOM05D003747 ORTHO05D005080 1.3e-146 524.6 795 47.2
SMO331G0035 Selaginella moellendorffii HOM05D003747 ORTHO05D005080 1.2e-139 501.5 808 50.2
CDE05G0031 Ceratophyllum demersum HOM05D003747 ORTHO05D005080 6.5e-138 495.7 671 56.0
Cc10_g07350 Coffea canephora HOM05D003747 ORTHO05D005080 6.7e-135 485.7 824 48.1
unitig_746.g26813 Utricularia gibba HOM05D003747 ORTHO05D005080 7.9e-120 435.6 644 56.4
CBR_g21825 Chara braunii HOM05D003747 ORTHO05D005080 3.1e-116 423.7 885 41.6
CDE10G1342 Ceratophyllum demersum HOM05D003747 ORTHO05D005080 3.2e-113 413.7 762 36.1
CsaV3_1G045450 Cucumis sativus L. HOM05D003747 ORTHO05D005080 4.2e-97 360.1 321 57.0
CsaV3_UNG233290 Cucumis sativus L. HOM05D003747 ORTHO05D005080 4.2e-97 360.1 321 57.0
CsaV3_1G045460 Cucumis sativus L. HOM05D003747 ORTHO05D005080 1.3e-93 348.6 353 55.5
HPP92_027213 Vanilla planifolia HOM05D003747 ORTHO05D005080 7.0e-92 342.8 363 52.6
FAN14G4182 Fragaria x ananassa HOM05D003747 ORTHO05D005080 1.0e-87 328.9 353 53.3
Rhsim06G0014300 Rhododendron simsii HOM05D003747 ORTHO05D000001 3.7e-77 293.9 326 47.9
CsaV3_UNG233280 Cucumis sativus L. HOM05D003747 ORTHO05D005080 5.9e-75 286.6 328 52.1
BolC8t46977H Brassica oleracea HOM05D003747 ORTHO05D016772 3.0e-50 204.5 203 52.2
C08p01770 Brassica napus HOM05D003747 ORTHO05D016772 1.4e-47 195.7 203 50.7
HPP92_027212 Vanilla planifolia HOM05D003747 ORTHO05D051588 5.8e-46 190.3 200 52.5
Zm00001eb159690 Zea mays HOM05D003747 ORTHO05D051588 8.7e-42 176.4 293 39.6
FAN05G3899 Fragaria x ananassa HOM05D003747 ORTHO05D005080 4.9e-37 160.6 186 49.5
TAR628G1670 Trochodendron aralioides HOM05D003747 ORTHO05D016772 2.4e-36 158.3 226 42.0
FAN20G0559 Fragaria x ananassa HOM05D003747 ORTHO05D005080 9.3e-36 156.4 186 49.5
FAN03G1393 Fragaria x ananassa HOM05D003747 ORTHO05D005080 6.0e-35 153.7 163 54.0
FAN12G1591 Fragaria x ananassa HOM05D003747 ORTHO05D005080 1.0e-34 152.9 186 48.4
Rhsim06G0014800 Rhododendron simsii HOM05D003747 ORTHO05D005080 4.3e-33 147.5 657 25.3
HanXRQChr13g0424291 Helianthus annuus HOM05D003747 ORTHO05D005080 4.8e-32 144.1 217 37.3
Rhsim06G0013900 Rhododendron simsii HOM05D003747 ORTHO05D005080 2.4e-28 131.7 657 24.4
HPP92_027211 Vanilla planifolia HOM05D003747 ORTHO05D016772 6.0e-27 127.1 87 60.9
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.5e-25 121.7 95 66.3
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.3e-25 121.3 95 66.3
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.6e-24 119.0 95 65.3
unitig_746.g26812 Utricularia gibba HOM05D003747 ORTHO05D016772 3.1e-23 114.8 97 54.6
BcaC07g36860 Brassica carinata HOM05D003747 ORTHO05D016772 4.9e-21 107.5 79 62.0
Lj3A744G93 Lonicera japonica HOM05D000041 ORTHO05D000452 5.5e-20 104.0 100 51.0
Pp3c1_6530 Physcomitrium patens HOM05D003747 ORTHO05D005080 1.3e-18 99.4 88 58.0
Lj3A743G72 Lonicera japonica HOM05D000041 ORTHO05D000452 1.8e-18 99.0 100 50.0
BcaC05g24429 Brassica carinata HOM05D003747 ORTHO05D016772 1.9e-17 95.5 67 61.2
unitig_899.g15538 Utricularia gibba HOM05D003747 ORTHO05D016772 4.3e-17 94.4 78 52.6
Lsat_1_v5_gn_4_36661 Lactuca sativa HOM05D003747 ORTHO05D005080 1.0e-13 83.2 91 49.5
Nn5g30522 Nelumbo nucifera HOM05D003747 ORTHO05D005080 3.2e-12 78.2 50 78.0
Lsat_1_v5_gn_8_75581 Lactuca sativa HOM05D000041 ORTHO05D000452 9.3e-12 76.6 140 37.1
BcaC07g36859 Brassica carinata HOM05D003747 ORTHO05D016772 2.7e-11 75.1 115 40.0
Lj3A744G94 Lonicera japonica HOM05D000041 ORTHO05D004955 3.9e-10 71.2 72 50.0
Zm00001eb159680 Zea mays HOM05D003747 ORTHO05D029724 1.2e-06 59.7 128 32.0
Zm00001eb026790 Zea mays HOM05D003747 ORTHO05D029724 3.4e-06 58.2 41 63.4


User provided reference genes

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