Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 0.0e+00 1172.5 631 100.0
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.8e-244 849.4 725 65.9
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.0e-231 807.0 601 72.7
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.2e-229 799.3 626 69.2
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.4e-220 770.0 489 76.5
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.0e-218 763.8 485 77.3
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.7e-218 763.1 662 61.6
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 7.2e-217 757.7 487 74.3
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 1.4e-215 753.4 489 73.0
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.3e-215 752.7 488 73.6
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.5e-214 750.0 490 74.7
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 2.6e-214 749.2 488 74.2
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 4.4e-214 748.4 487 73.5
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.7e-214 748.0 546 66.8
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 9.8e-214 747.3 487 73.3
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.7e-213 746.5 560 68.6
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-213 746.5 488 73.2
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.2e-213 746.1 488 73.2
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 3.7e-213 745.3 489 73.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 3.7e-213 745.3 487 73.1
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 8.3e-213 744.2 541 68.4
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.4e-212 743.4 487 72.5
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.4e-212 743.4 488 73.0
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.8e-212 743.0 488 73.0
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.8e-212 743.0 487 73.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 7.0e-212 741.1 487 73.1
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 7.0e-212 741.1 627 65.6
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.6e-211 740.0 539 68.1
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.9e-211 738.0 622 65.6
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 7.7e-211 737.6 490 72.4
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.3e-210 736.1 491 72.3
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.3e-210 736.1 491 72.3
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.9e-210 735.7 488 72.5
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 3.8e-210 735.3 488 72.7
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 5.0e-210 734.9 491 71.7
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.5e-209 732.6 489 72.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 4.2e-209 731.9 490 70.4
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 9.5e-209 730.7 488 71.7
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.1e-208 729.6 491 70.9
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.6e-208 728.8 489 73.0
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 6.1e-208 728.0 487 71.7
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 8.0e-208 727.6 487 71.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.4e-207 726.9 489 71.0
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.8e-207 726.5 487 72.3
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.3e-207 726.1 488 71.7
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 3.0e-207 725.7 489 71.0
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 4.0e-207 725.3 488 71.9
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.5e-206 723.4 489 71.0
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.0e-206 723.0 484 70.0
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 2.6e-206 722.6 489 70.8
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 5.7e-206 721.5 488 69.7
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 7.5e-206 721.1 489 73.0
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.7e-205 719.9 489 72.8
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.7e-205 719.9 489 72.8
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 2.2e-205 719.5 490 70.0
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.2e-205 719.5 489 72.8
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 8.3e-205 717.6 489 68.5
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 8.3e-205 717.6 490 72.0
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.4e-204 716.8 485 70.9
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.8e-204 716.5 490 70.2
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.8e-204 716.5 491 70.5
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 5.4e-204 714.9 489 68.5
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 7.0e-204 714.5 488 69.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.2e-203 713.8 490 70.0
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 2.0e-203 713.0 490 69.6
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 2.7e-203 712.6 490 69.8
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 3.5e-203 712.2 490 69.8
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 4.5e-203 711.8 491 70.3
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 4.5e-203 711.8 486 70.8
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.3e-202 710.3 488 69.7
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 1.7e-202 709.9 490 69.2
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.7e-202 709.9 487 71.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 3.8e-202 708.8 482 70.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 5.0e-202 708.4 485 72.0
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.0e-202 708.4 488 69.3
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 8.6e-202 707.6 488 69.9
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.5e-201 706.1 487 69.4
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 4.7e-200 701.8 483 69.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 4.7e-200 701.8 489 70.8
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 8.0e-200 701.0 485 68.9
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.0e-199 698.7 477 72.1
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 2.0e-198 696.4 489 67.1
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 7.5e-198 694.5 488 68.2
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 4.9e-197 691.8 479 69.1
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.4e-196 690.3 490 67.6
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 2.4e-196 689.5 488 67.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.7e-195 686.0 475 71.4
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.7e-194 683.3 475 69.3
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 5.0e-194 681.8 490 68.2
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.5e-193 679.5 428 76.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.1e-192 676.4 487 67.8
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 4.9e-189 665.2 489 66.5
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 6.4e-189 664.8 489 66.5
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 7.0e-188 661.4 487 67.8
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 3.3e-185 652.5 451 69.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 9.5e-185 651.0 483 65.4
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.2e-184 650.6 489 66.5
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.6e-184 649.0 486 64.0
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.3e-181 640.6 540 62.6
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 2.2e-181 639.8 590 60.3
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 8.6e-178 627.9 485 61.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.7e-149 533.9 625 50.4
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 4.3e-145 519.2 490 55.1
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.7e-131 473.4 583 52.1
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 8.8e-130 468.4 552 46.4
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 4.7e-123 446.0 330 68.2
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.6e-113 413.7 282 72.0
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 6.1e-107 392.5 631 39.9
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 2.2e-104 384.0 253 70.4
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 7.2e-100 369.0 537 38.4
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-91 341.7 322 54.0
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.4e-87 327.4 205 75.6
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.5e-86 323.6 202 75.2
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.7e-85 321.2 653 37.8
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 3.0e-77 293.9 218 66.1
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.9e-71 274.6 559 32.4
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 2.9e-56 224.2 247 56.3
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-55 219.9 269 47.6
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.1e-42 179.1 99 80.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 6.9e-42 176.4 133 62.4
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.1e-39 169.1 130 64.6
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.9e-39 168.3 130 64.6
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.1e-35 154.8 93 81.7
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.9e-32 143.7 93 74.2
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.3e-29 135.6 192 43.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 3.0e-29 134.4 93 68.8
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-28 132.5 113 62.8
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.4e-26 124.8 74 74.3
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-24 118.6 554 26.5
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 8.4e-24 116.3 71 74.6
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 1.4e-23 115.5 93 54.8
BcaC09g50643 Brassica carinata HOM05D003801 ORTHO05D017532 1.0e-21 109.4 79 62.0
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.3e-19 102.4 129 46.5
CSS0002033 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 2.2e-16 91.7 50 82.0
CSS0044835 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D017532 2.9e-16 91.3 50 82.0
C01p10430 Brassica napus HOM05D003801 ORTHO05D017532 1.4e-13 82.4 97 42.3
CAN.G1823.3 Capsicum annuum HOM05D004966 ORTHO05D017532 1.8e-13 82.0 47 74.5
COL.COLO4_27263 Corchorus olitorius HOM05D010859 ORTHO05D010098 4.1e-10 70.9 65 56.9
CBR_g36364 Chara braunii HOM05D004966 ORTHO05D135640 1.3e-08 65.9 81 39.5
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 2.5e-07 61.6 49 49.0
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.2e-07 61.2 43 67.4
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.2e-06 59.3 29 93.1


User provided reference genes

Program Settings