Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g33600_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 2.1e-51 205.3 98 100.0
MBI14_g46625_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 4.0e-50 201.1 98 98.0
MBI17_g25803_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 9.0e-42 173.3 85 97.6
MBI07_g31313_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 8.8e-13 77.0 44 86.4
MBI19_g14800_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 1.7e-11 72.8 57 68.4
TAR636G0232 Trochodendron aralioides HOM05D000836 ORTHO05D000709 3.7e-11 71.6 44 77.3
PSO674G0107 Papaver somniferum HOM05D000836 ORTHO05D000709 5.4e-10 67.8 44 75.0
Gohir.A03G093900 Gossypium hirsutum HOM05D000836 ORTHO05D000709 9.1e-10 67.0 43 72.1
PSO170G6221 Papaver somniferum HOM05D000836 ORTHO05D000709 9.1e-10 67.0 44 75.0
TWI73G0286 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 1.6e-09 66.2 42 71.4
Atru.chr4.1725 Acer truncatum HOM05D000836 ORTHO05D000709 2.0e-09 65.9 53 64.2
FAN27G2627 Fragaria x ananassa HOM05D000836 ORTHO05D000709 2.7e-09 65.5 56 64.3
Gohir.D10G142600 Gossypium hirsutum HOM05D000836 ORTHO05D000709 2.7e-09 65.5 83 42.2
Thecc.04G205800 Theobroma cacao HOM05D000836 ORTHO05D000709 2.7e-09 65.5 43 69.8
TWI53G1423 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 2.7e-09 65.5 42 71.4
Gohir.D02G123100 Gossypium hirsutum HOM05D000836 ORTHO05D000709 4.5e-09 64.7 43 69.8
Gorai.005G131200 Gossypium raimondii HOM05D000836 ORTHO05D000709 4.5e-09 64.7 43 69.8
Nn1g07846 Nelumbo nucifera HOM05D000836 ORTHO05D000709 4.5e-09 64.7 44 70.5
Potri.002G241800 Populus trichocarpa HOM05D000836 ORTHO05D000709 5.9e-09 64.3 50 64.0
Sabra02G0184200 Salix brachista HOM05D000836 ORTHO05D000709 5.9e-09 64.3 50 64.0
Gorai.011G159400 Gossypium raimondii HOM05D000836 ORTHO05D000709 7.7e-09 63.9 43 67.4
Prupe.8G203500 Prunus persica HOM05D000836 ORTHO05D000709 7.7e-09 63.9 47 63.8
TAR365G0060 Trochodendron aralioides HOM05D000836 ORTHO05D000709 7.7e-09 63.9 44 70.5
Ciclev10004358m.g Citrus clementina HOM05D000836 ORTHO05D000709 1.0e-08 63.5 43 65.1
MSTRG.21421 Avicennia marina HOM05D000836 ORTHO05D000709 1.3e-08 63.2 40 75.0
MBI10_g18939_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 1.3e-08 63.2 44 68.2
Phvul.007G244700 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 1.3e-08 63.2 43 69.8
FvH4_2g19160 Fragaria vesca HOM05D000836 ORTHO05D000709 2.2e-08 62.4 47 63.8
FAN24G1148 Fragaria x ananassa HOM05D000836 ORTHO05D000709 2.2e-08 62.4 47 63.8
RcHm_v2.0_Chr6g0284941 Rosa chinensis HOM05D000836 ORTHO05D000709 2.2e-08 62.4 47 63.8
Duzib268G1331 Durio zibethinus HOM05D000836 ORTHO05D000709 3.8e-08 61.6 43 65.1
Nn3g19956 Nelumbo nucifera HOM05D000836 ORTHO05D000709 3.8e-08 61.6 44 65.9
Oeu009725.1 Olea europaea HOM05D000836 ORTHO05D000709 3.8e-08 61.6 53 62.3
Potri.003G178600 Populus trichocarpa HOM05D000836 ORTHO05D000709 3.8e-08 61.6 44 61.4
VMungo0720G2087 Vigna mungo HOM05D000836 ORTHO05D000709 3.8e-08 61.6 43 67.4
MD05G1175800 Malus domestica HOM05D000836 ORTHO05D000709 5.0e-08 61.2 76 43.4
Oeu022256.1 Olea europaea HOM05D000836 ORTHO05D000709 5.0e-08 61.2 56 58.9
CAN.G122.3 Capsicum annuum HOM05D000836 ORTHO05D000709 6.5e-08 60.8 55 60.0
Gohir.D10G159833 Gossypium hirsutum HOM05D000836 ORTHO05D015686 6.5e-08 60.8 34 79.4
Manes.13G045500 Manihot esculenta HOM05D000836 ORTHO05D000709 6.5e-08 60.8 47 61.7
Potri.001G049400 Populus trichocarpa HOM05D000836 ORTHO05D000709 6.5e-08 60.8 44 61.4
QL09p054646 Quercus lobata HOM05D000836 ORTHO05D000709 6.5e-08 60.8 47 61.7
Actinidia37590 Actinidia chinensis HOM05D000836 ORTHO05D000709 8.5e-08 60.5 47 61.7
Manes.15G052600 Manihot esculenta HOM05D000836 ORTHO05D000709 8.5e-08 60.5 32 84.4
TWI36G1193 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 8.5e-08 60.5 47 59.6
Migut.D00533 Erythranthe guttata HOM05D000836 ORTHO05D000709 1.1e-07 60.1 47 61.7
FAN15G3190 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.1e-07 60.1 47 61.7
Sed0006740 Sechium edule HOM05D000836 ORTHO05D000709 1.1e-07 60.1 44 61.4
CAN.G771.72 Capsicum annuum HOM05D000836 ORTHO05D000709 1.5e-07 59.7 44 65.9
Cpa.g.sc59.128 Carica papaya HOM05D000836 ORTHO05D000709 1.5e-07 59.7 53 58.5
Sc17g0002340 Simmondsia chinensis HOM05D000836 ORTHO05D000709 1.5e-07 59.7 44 63.6
Sc17g0002390 Simmondsia chinensis HOM05D000836 ORTHO05D000709 1.5e-07 59.7 44 63.6
Zm00001eb258660 Zea mays HOM05D000836 ORTHO05D000709 1.5e-07 59.7 44 63.6
Carub.0004s1406 Capsella rubella HOM05D000836 ORTHO05D000709 1.9e-07 59.3 44 56.8
COL.COLO4_10279 Corchorus olitorius HOM05D000836 ORTHO05D000709 1.9e-07 59.3 53 58.5
CsaV3_3G011040 Cucumis sativus L. HOM05D000836 ORTHO05D000709 1.9e-07 59.3 44 61.4
Nitab4.5_0000045g0120 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.9e-07 59.3 55 56.4
Nitab4.5_0006192g0020 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.9e-07 59.3 55 56.4
SGA_v2.0_scaffold1G00745 Striga asiatica HOM05D000836 ORTHO05D000709 1.9e-07 59.3 47 61.7
HPP92_014749 Vanilla planifolia HOM05D000836 ORTHO05D000709 1.9e-07 59.3 50 64.0
Hma1.2p1_0351F.1_g132890 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 2.5e-07 58.9 47 59.6
Oeu023090.1 Olea europaea HOM05D000836 ORTHO05D000709 2.5e-07 58.9 37 70.3
Peaxi162Scf00517g00513 Petunia axillaris HOM05D000836 ORTHO05D000709 2.5e-07 58.9 47 61.7
Sabra03G0130900 Salix brachista HOM05D000836 ORTHO05D000709 2.5e-07 58.9 44 59.1
Sp4g15040 Schrenkiella parvula HOM05D000836 ORTHO05D000709 2.5e-07 58.9 86 37.2
PGSC0003DMG400017653 Solanum tuberosum HOM05D000836 ORTHO05D000709 2.5e-07 58.9 55 58.2
Duzib133G0531 Durio zibethinus HOM05D000836 ORTHO05D000709 3.2e-07 58.5 44 63.6
Manes.03G148800 Manihot esculenta HOM05D000836 ORTHO05D000709 3.2e-07 58.5 44 61.4
SalBow2G2753 Salvia bowleyana HOM05D000836 ORTHO05D000709 3.2e-07 58.5 47 66.0
Sopen09g024030 Solanum pennellii HOM05D000836 ORTHO05D000709 3.2e-07 58.5 47 61.7
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 4.2e-07 58.2 44 59.1
CSS0023634 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 4.2e-07 58.2 47 59.6
CSS0049393 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 4.2e-07 58.2 47 59.6
CARHR126590 Cardamine hirsuta HOM05D000836 ORTHO05D000709 4.2e-07 58.2 44 56.8
CiPaw.03G150200 Carya illinoinensis HOM05D000836 ORTHO05D000709 4.2e-07 58.2 59 54.2
Ciclev10023309m.g Citrus clementina HOM05D000836 ORTHO05D000709 4.2e-07 58.2 57 56.1
Duzib138G1320 Durio zibethinus HOM05D000836 ORTHO05D000709 4.2e-07 58.2 48 60.4
Glyma.02G164700 Glycine max HOM05D000836 ORTHO05D000709 4.2e-07 58.2 43 65.1
Solyc09g061290.3 Solanum lycopersicum HOM05D000836 ORTHO05D000709 4.2e-07 58.2 47 59.6
THA.LOC104801044 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 4.2e-07 58.2 44 56.8
MELO3C006318.2 Cucumis melo HOM05D000836 ORTHO05D000709 5.5e-07 57.8 44 59.1
Nitab4.5_0012093g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 5.5e-07 57.8 47 59.6
Os04g0510200 Oryza sativa ssp. japonica HOM05D000836 ORTHO05D000709 5.5e-07 57.8 44 59.1
Duzib151G0556 Durio zibethinus HOM05D000836 ORTHO05D000709 7.2e-07 57.4 43 62.8
Lj1C85G3 Lonicera japonica HOM05D000836 ORTHO05D000709 7.2e-07 57.4 49 55.1
SGA_v2.0_scaffold8G04645 Striga asiatica HOM05D000836 ORTHO05D000709 7.2e-07 57.4 47 57.4
Glyma.10G102400 Glycine max HOM05D000836 ORTHO05D000709 9.4e-07 57.0 43 65.1
Sed0000820 Sechium edule HOM05D000836 ORTHO05D000709 9.4e-07 57.0 44 59.1
GSVIVG01029450001 Vitis vinifera HOM05D000836 ORTHO05D015686 9.4e-07 57.0 41 70.7
CAN.G625.42 Capsicum annuum HOM05D000836 ORTHO05D000709 1.2e-06 56.6 37 73.0
Gohir.D11G143800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.2e-06 56.6 51 56.9
AT2G32700 Arabidopsis thaliana HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 54.5
MD05G1176000 Malus domestica HOM05D000836 ORTHO05D000709 1.6e-06 56.2 47 57.4
Sabra01G0034200 Salix brachista HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 56.8
Solyc06g083460.4 Solanum lycopersicum HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 61.4
Sopen06g034840 Solanum pennellii HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 61.4
PGSC0003DMG400020093 Solanum tuberosum HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 61.4
Thecc.01G226600 Theobroma cacao HOM05D000836 ORTHO05D000709 1.6e-06 56.2 53 56.6
GSVIVG01028646001 Vitis vinifera HOM05D000836 ORTHO05D000709 1.6e-06 56.2 44 63.6
Lj2A1132G71 Lonicera japonica HOM05D000836 ORTHO05D000709 2.1e-06 55.8 40 65.0
Prupe.1G005100 Prunus persica HOM05D000836 ORTHO05D000709 2.1e-06 55.8 41 65.9
AL4G28140 Arabidopsis lyrata HOM05D000836 ORTHO05D000709 2.7e-06 55.5 44 52.3
BcaC01g05896 Brassica carinata HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
A03p18260 Brassica napus HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
C03p21310 Brassica napus HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
BolC3t14513H Brassica oleracea HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
BraA03t11086Z Brassica rapa HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
Thhalv10016303m.g Eutrema salsugineum HOM05D000836 ORTHO05D000709 2.7e-06 55.5 43 53.5
Gohir.A11G137400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 2.7e-06 55.5 39 64.1
MSTRG.17552 Avicennia marina HOM05D000836 ORTHO05D000709 3.6e-06 55.1 43 58.1
CiPaw.01G122500 Carya illinoinensis HOM05D000836 ORTHO05D000709 3.6e-06 55.1 43 55.8
CiPaw.02G067000 Carya illinoinensis HOM05D000836 ORTHO05D000709 3.6e-06 55.1 43 58.1
ClCG05G003390 Citrullus lanatus HOM05D000836 ORTHO05D000709 3.6e-06 55.1 35 68.6
Gorai.007G154000 Gossypium raimondii HOM05D000836 ORTHO05D000709 3.6e-06 55.1 51 54.9
Psat6g130000 Pisum sativum HOM05D000836 ORTHO05D000709 3.6e-06 55.1 53 58.5
TPR.G7604 Trifolium pratense HOM05D000836 ORTHO05D000709 3.6e-06 55.1 53 58.5
Aa31LG5G4350 Aethionema arabicum HOM05D000836 ORTHO05D000709 4.7e-06 54.7 44 52.3
BcaB01g03965 Brassica carinata HOM05D000836 ORTHO05D000709 4.7e-06 54.7 43 51.2
BcaB02g10491 Brassica carinata HOM05D000836 ORTHO05D000709 4.7e-06 54.7 43 53.5
AUR62008907 Chenopodium quinoa HOM05D000836 ORTHO05D000709 4.7e-06 54.7 44 56.8
Cc01_g17100 Coffea canephora HOM05D000836 ORTHO05D000709 4.7e-06 54.7 47 55.3
MD04G1005500 Malus domestica HOM05D000836 ORTHO05D000709 4.7e-06 54.7 53 60.4
vmacro14755 Vaccinium macrocarpon HOM05D000836 ORTHO05D000709 4.7e-06 54.7 47 57.4
GSVIVG01026712001 Vitis vinifera HOM05D000836 ORTHO05D015686 4.7e-06 54.7 39 69.2
BraA05t20231Z Brassica rapa HOM05D000836 ORTHO05D000709 6.1e-06 54.3 39 53.8
BcaC02g11353 Brassica carinata HOM05D000836 ORTHO05D000709 8.0e-06 53.9 43 51.2
A05p12910 Brassica napus HOM05D000836 ORTHO05D000709 8.0e-06 53.9 43 51.2
C04p16930 Brassica napus HOM05D000836 ORTHO05D000709 8.0e-06 53.9 43 51.2
BolC4t23252H Brassica oleracea HOM05D000836 ORTHO05D000709 8.0e-06 53.9 43 51.2
Cpa.g.sc8.161 Carica papaya HOM05D000836 ORTHO05D000709 8.0e-06 53.9 53 54.7
Prupe.1G005700 Prunus persica HOM05D000836 ORTHO05D000709 8.0e-06 53.9 53 58.5


User provided reference genes

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