Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.0e-56 221.1 104 100.0
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.9e-38 161.0 101 78.2
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 9.0e-32 140.2 103 68.0
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 5.8e-31 137.5 102 65.7
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.7e-30 136.0 99 66.7
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 2.2e-30 135.6 101 67.3
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.2e-30 135.6 103 63.1
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 3.8e-30 134.8 101 67.3
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.4e-30 133.7 103 61.2
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.5e-29 132.1 101 64.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.5e-29 132.1 102 62.7
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.2e-28 129.8 99 63.6
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.6e-28 129.4 99 63.6
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.1e-28 129.0 101 65.3
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.5e-28 128.3 99 60.6
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 6.0e-28 127.5 101 64.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 7.9e-28 127.1 103 60.2
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.0e-27 126.7 103 60.2
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.3e-27 126.3 99 63.6
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.3e-27 126.3 99 63.6
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.3e-27 126.3 98 63.3
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.8e-27 125.9 100 63.0
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.3e-27 125.6 103 59.2
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.0e-27 125.2 98 64.3
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 3.0e-27 125.2 99 64.6
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.0e-27 125.2 101 61.4
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.0e-27 125.2 101 61.4
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 3.9e-27 124.8 103 58.3
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.9e-27 124.8 99 64.6
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 3.9e-27 124.8 98 63.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 5.1e-27 124.4 101 61.4
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 5.1e-27 124.4 98 63.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 5.1e-27 124.4 99 62.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.1e-27 124.4 101 61.4
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 5.1e-27 124.4 98 61.2
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 6.7e-27 124.0 103 58.3
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 6.7e-27 124.0 99 63.6
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 6.7e-27 124.0 98 61.2
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 6.7e-27 124.0 101 60.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 6.7e-27 124.0 99 60.6
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 8.7e-27 123.6 102 57.8
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.1e-26 123.2 99 64.6
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.5e-26 122.9 98 61.2
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.9e-26 122.5 98 61.2
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 1.9e-26 122.5 98 62.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 2.5e-26 122.1 103 57.3
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.5e-26 122.1 98 61.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 3.3e-26 121.7 103 57.3
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 3.3e-26 121.7 103 57.3
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 3.3e-26 121.7 99 62.6
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 3.3e-26 121.7 98 60.2
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.3e-26 121.7 101 58.4
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 3.3e-26 121.7 98 61.2
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 4.3e-26 121.3 101 59.4
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.3e-26 121.3 98 60.2
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 5.7e-26 120.9 101 59.4
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 5.7e-26 120.9 100 59.0
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.7e-26 120.9 98 62.2
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 7.4e-26 120.6 103 56.3
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 7.4e-26 120.6 97 60.8
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 9.6e-26 120.2 103 56.3
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 9.6e-26 120.2 103 56.3
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.3e-25 119.8 98 61.2
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.6e-25 119.4 103 56.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.6e-25 119.4 101 58.4
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.6e-25 119.4 103 58.3
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.8e-25 117.9 101 57.4
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 4.8e-25 117.9 99 56.6
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 4.8e-25 117.9 99 55.6
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 4.8e-25 117.9 99 60.6
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 6.2e-25 117.5 98 58.2
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 6.2e-25 117.5 99 57.6
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 8.2e-25 117.1 99 56.6
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 8.2e-25 117.1 98 59.2
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.1e-24 116.7 118 54.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.1e-24 116.7 101 57.4
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.1e-24 116.7 96 63.5
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.4e-24 116.3 97 59.8
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-24 116.3 91 67.0
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.8e-24 115.9 99 56.6
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.4e-24 115.5 101 55.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 2.4e-24 115.5 96 62.5
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.1e-24 115.2 99 58.6
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 4.1e-24 114.8 101 55.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 5.3e-24 114.4 101 54.5
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.3e-24 114.4 102 58.8
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 6.9e-24 114.0 101 55.4
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 9.0e-24 113.6 104 54.8
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.2e-23 113.2 99 58.6
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.5e-23 112.8 99 56.6
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.0e-23 112.5 100 56.0
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.0e-23 112.5 100 56.0
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.0e-23 112.5 101 53.5
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.6e-23 112.1 101 55.4
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.4e-23 111.7 98 55.1
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.5e-23 111.3 101 55.4
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 5.8e-23 110.9 99 52.5
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.0e-22 110.2 101 54.5
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.3e-22 109.8 96 57.3
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.3e-22 109.8 96 57.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.7e-22 109.4 101 55.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.7e-22 109.4 101 53.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.7e-22 109.4 96 57.3
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.7e-22 109.4 96 57.3
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.7e-22 109.4 101 54.5
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.9e-22 108.6 98 55.1
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.8e-22 108.2 90 60.0
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 5.0e-22 107.8 99 53.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.5e-22 107.5 96 57.3
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.5e-21 105.5 99 52.5
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 4.2e-21 104.8 101 50.5
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 7.2e-21 104.0 135 46.7
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 2.7e-20 102.1 81 59.3
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 2.7e-20 102.1 104 51.0
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.3e-18 94.7 80 57.5
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.1e-16 90.1 101 46.5
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.8e-16 89.4 101 46.5
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.7e-14 82.8 72 59.7
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.5e-14 80.9 60 66.7
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 7.2e-13 77.4 61 59.0
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-12 76.6 61 60.7
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.3e-09 64.3 45 66.7


User provided reference genes

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