Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08218_MAGBIO Magnolia biondii HOM05D002880 ORTHO05D003450 3.7e-202 708.0 359 100.0
Nn5g30154 Nelumbo nucifera HOM05D002880 ORTHO05D003450 5.7e-150 534.6 357 79.0
SGA_v2.0_scaffold78G25389 Striga asiatica HOM05D002880 ORTHO05D003450 8.2e-149 530.8 362 77.1
SalBow3G1624 Salvia bowleyana HOM05D002880 ORTHO05D003450 1.8e-148 529.6 362 77.3
DCAR_025997 Daucus carota HOM05D002880 ORTHO05D003450 4.1e-148 528.5 359 76.9
Ciclev10024677m.g Citrus clementina HOM05D002880 ORTHO05D003450 5.3e-148 528.1 357 77.9
PSO541G3550 Papaver somniferum HOM05D002880 ORTHO05D003450 5.3e-148 528.1 373 75.3
Sc07g0000970 Simmondsia chinensis HOM05D002880 ORTHO05D003450 5.3e-148 528.1 356 78.7
TWI09G0522 Tripterygium wilfordii HOM05D002880 ORTHO05D003450 1.5e-147 526.6 357 78.4
Dinv40086 Davidia involucrata HOM05D002880 ORTHO05D003450 2.0e-147 526.2 360 76.9
Aqoxy5G01784 Aquilegia oxysepala HOM05D002880 ORTHO05D003450 2.6e-147 525.8 359 77.4
Peaxi162Scf00083g00425 Petunia axillaris HOM05D002880 ORTHO05D003450 5.9e-147 524.6 357 77.9
QL06p032715 Quercus lobata HOM05D002880 ORTHO05D003450 1.0e-146 523.9 357 77.0
PSO675G2090 Papaver somniferum HOM05D002880 ORTHO05D003450 1.3e-146 523.5 359 76.3
Gohir.A11G175612 Gossypium hirsutum HOM05D002880 ORTHO05D003450 2.2e-146 522.7 357 76.5
Manes.01G145600 Manihot esculenta HOM05D002880 ORTHO05D003450 2.2e-146 522.7 357 76.8
Thecc.01G019100 Theobroma cacao HOM05D002880 ORTHO05D003450 3.8e-146 521.9 358 76.8
Gohir.D11G183201 Gossypium hirsutum HOM05D002880 ORTHO05D003450 5.0e-146 521.5 357 76.5
Gorai.007G195100 Gossypium raimondii HOM05D002880 ORTHO05D003450 5.0e-146 521.5 357 76.5
Hund16489 Selenicereus undatus HOM05D002880 ORTHO05D003450 1.1e-145 520.4 357 77.6
Potri.005G114300 Populus trichocarpa HOM05D002880 ORTHO05D003450 2.5e-145 519.2 358 77.1
EL10Ac6g15479 Beta vulgaris HOM05D002880 ORTHO05D003450 3.2e-145 518.8 357 77.9
THA.LOC104804262 Tarenaya hassleriana HOM05D002880 ORTHO05D003450 3.2e-145 518.8 358 75.7
Cfa006971 Carpinus fangiana HOM05D002880 ORTHO05D003450 4.2e-145 518.5 358 76.5
Sabra05G0093500 Salix brachista HOM05D002880 ORTHO05D003450 9.4e-145 517.3 357 76.8
Migut.H01155 Erythranthe guttata HOM05D002880 ORTHO05D003450 1.6e-144 516.5 365 75.3
Gohir.D03G009500 Gossypium hirsutum HOM05D002880 ORTHO05D003450 1.6e-144 516.5 357 75.4
Gorai.003G009700 Gossypium raimondii HOM05D002880 ORTHO05D003450 1.6e-144 516.5 357 75.4
Duzib187G1438 Durio zibethinus HOM05D002880 ORTHO05D003450 2.7e-144 515.8 357 77.0
Lj2g0011330 Lotus japonicus HOM05D002880 ORTHO05D003450 3.6e-144 515.4 357 74.2
Solyc02g083900.3 Solanum lycopersicum HOM05D002880 ORTHO05D003450 6.1e-144 514.6 360 75.8
Sopen02g028690 Solanum pennellii HOM05D002880 ORTHO05D003450 6.1e-144 514.6 360 75.8
Potri.007G057900 Populus trichocarpa HOM05D002880 ORTHO05D003450 1.0e-143 513.8 359 75.8
THA.LOC104819750 Tarenaya hassleriana HOM05D002880 ORTHO05D003450 1.8e-143 513.1 358 74.9
ECA238G3174 Erigeron canadensis HOM05D002880 ORTHO05D003450 2.3e-143 512.7 362 75.1
Oeu005318.1 Olea europaea HOM05D002880 ORTHO05D003450 2.3e-143 512.7 362 74.9
HanXRQChr14g0441401 Helianthus annuus HOM05D002880 ORTHO05D003450 3.0e-143 512.3 361 74.8
Lalb_Chr09g0321751 Lupinus albus HOM05D002880 ORTHO05D003450 3.0e-143 512.3 357 74.5
CSS0038464 Camellia sinensis var. sinensis HOM05D002880 ORTHO05D003450 3.9e-143 511.9 376 71.8
CSS0040827 Camellia sinensis var. sinensis HOM05D002880 ORTHO05D003450 3.9e-143 511.9 376 71.8
CsaV3_6G047090 Cucumis sativus L. HOM05D002880 ORTHO05D003450 1.1e-142 510.4 357 74.2
CANSAT01G1381 Cannabis sativa HOM05D002880 ORTHO05D003450 2.5e-142 509.2 357 74.5
CiPaw.07G058400 Carya illinoinensis HOM05D002880 ORTHO05D003450 2.5e-142 509.2 358 76.0
Lsat_1_v5_gn_2_75940 Lactuca sativa HOM05D002880 ORTHO05D003450 2.5e-142 509.2 358 75.7
MELO3C007903.2 Cucumis melo HOM05D002880 ORTHO05D003450 3.3e-142 508.8 357 74.2
Actinidia17445 Actinidia chinensis HOM05D002880 ORTHO05D003450 4.3e-142 508.4 363 75.8
Lalb_Chr16g0377511 Lupinus albus HOM05D002880 ORTHO05D003450 7.4e-142 507.7 357 73.9
Glyma.01G166400 Glycine max HOM05D002880 ORTHO05D003450 9.7e-142 507.3 357 73.7
ClCG01G020300 Citrullus lanatus HOM05D002880 ORTHO05D003450 1.3e-141 506.9 357 74.2
HanXRQChr13g0414661 Helianthus annuus HOM05D002880 ORTHO05D003450 1.3e-141 506.9 360 75.6
Phvul.002G108900 Phaseolus vulgaris HOM05D002880 ORTHO05D003450 1.3e-141 506.9 357 73.9
GSVIVG01018783001 Vitis vinifera HOM05D002880 ORTHO05D003450 1.3e-141 506.9 357 75.1
Ca_25825_v3 Cicer arietinum L. HOM05D002880 ORTHO05D003450 2.2e-141 506.1 359 72.4
Eucgr.I02351 Eucalyptus grandis HOM05D002880 ORTHO05D003450 2.8e-141 505.8 356 75.0
MSTRG.2713 Avicennia marina HOM05D002880 ORTHO05D003450 4.8e-141 505.0 362 73.2
Prupe.7G168000 Prunus persica HOM05D002880 ORTHO05D003450 4.8e-141 505.0 357 73.7
Medtr5g022000 Medicago truncatula HOM05D002880 ORTHO05D003450 2.4e-140 502.7 358 72.3
arahy.Tifrunner.gnm1.ann1.E76U4D Arachis hypogaea HOM05D002880 ORTHO05D003450 3.1e-140 502.3 357 73.4
arahy.Tifrunner.gnm1.ann1.FN5NT6 Arachis hypogaea HOM05D002880 ORTHO05D003450 3.1e-140 502.3 357 73.4
Cc07_g10710 Coffea canephora HOM05D002880 ORTHO05D003450 5.3e-140 501.5 357 73.4
RcHm_v2.0_Chr2g0099461 Rosa chinensis HOM05D002880 ORTHO05D003450 6.9e-140 501.1 357 73.9
BcaB07g31700 Brassica carinata HOM05D002880 ORTHO05D003450 1.2e-139 500.4 358 74.0
C09p13660 Brassica napus HOM05D002880 ORTHO05D003450 1.2e-139 500.4 358 74.0
BolC9t54256H Brassica oleracea HOM05D002880 ORTHO05D003450 1.2e-139 500.4 358 74.0
A06p33500 Brassica napus HOM05D002880 ORTHO05D003450 1.5e-139 500.0 358 73.7
A09p11620 Brassica napus HOM05D002880 ORTHO05D003450 1.5e-139 500.0 359 74.1
BraA06t26284Z Brassica rapa HOM05D002880 ORTHO05D003450 1.5e-139 500.0 358 73.7
CARHR108410 Cardamine hirsuta HOM05D002880 ORTHO05D003450 2.0e-139 499.6 358 74.0
AL3G50950 Arabidopsis lyrata HOM05D002880 ORTHO05D003450 2.6e-139 499.2 358 73.5
Psat2g154720 Pisum sativum HOM05D002880 ORTHO05D003450 4.5e-139 498.4 358 71.8
PGR119G1290 Punica granatum HOM05D002880 ORTHO05D003450 4.5e-139 498.4 364 73.4
Sed0027366 Sechium edule HOM05D002880 ORTHO05D003450 7.7e-139 497.7 357 73.1
Carub.0003s3206 Capsella rubella HOM05D002880 ORTHO05D003450 1.0e-138 497.3 358 73.5
BcaB08g34776 Brassica carinata HOM05D002880 ORTHO05D003450 1.3e-138 496.9 358 73.5
C03p58840 Brassica napus HOM05D002880 ORTHO05D003450 1.3e-138 496.9 356 73.9
FvH4_1g11860 Fragaria vesca HOM05D002880 ORTHO05D003450 2.2e-138 496.1 359 73.0
FAN19G0100 Fragaria x ananassa HOM05D002880 ORTHO05D003450 2.9e-138 495.7 359 73.0
Sp3g31350 Schrenkiella parvula HOM05D002880 ORTHO05D003450 2.9e-138 495.7 358 73.7
Aa31LG8G15100 Aethionema arabicum HOM05D002880 ORTHO05D003450 3.8e-138 495.4 361 73.1
AT4G36080 Arabidopsis thaliana HOM05D002880 ORTHO05D003450 6.5e-138 494.6 357 72.8
AT2G17930 Arabidopsis thaliana HOM05D002880 ORTHO05D003450 8.5e-138 494.2 357 73.7
FAN23G1788 Fragaria x ananassa HOM05D002880 ORTHO05D003450 1.1e-137 493.8 357 73.1
FAN26G2624 Fragaria x ananassa HOM05D002880 ORTHO05D003450 1.9e-137 493.0 357 73.7
AL7G14960 Arabidopsis lyrata HOM05D002880 ORTHO05D003450 2.5e-137 492.7 357 72.8
BolC3t18143H Brassica oleracea HOM05D002880 ORTHO05D003450 3.2e-137 492.3 356 73.3
Thhalv10024177m.g Eutrema salsugineum HOM05D002880 ORTHO05D003450 3.2e-137 492.3 358 72.9
Atru.chr1.3786 Acer truncatum HOM05D002880 ORTHO05D003450 5.5e-137 491.5 331 78.5
CARHR244480 Cardamine hirsuta HOM05D002880 ORTHO05D003450 1.6e-136 490.0 357 71.4
FAN28G1007 Fragaria x ananassa HOM05D002880 ORTHO05D003450 1.6e-136 490.0 357 72.5
Sabra07G0049600 Salix brachista HOM05D002880 ORTHO05D003450 1.6e-136 490.0 402 67.7
Lj2C468G7 Lonicera japonica HOM05D002880 ORTHO05D003450 8.8e-135 484.2 337 76.0
Rhsim10G0212500 Rhododendron simsii HOM05D002880 ORTHO05D003450 3.3e-134 482.3 342 76.0
Haze_03765 Corylus avellana HOM05D002880 ORTHO05D003450 5.7e-134 481.5 358 72.9
COL.COLO4_21911 Corchorus olitorius HOM05D002880 ORTHO05D003450 8.2e-133 477.6 331 76.7
AUR62003370 Chenopodium quinoa HOM05D002880 ORTHO05D003450 1.4e-132 476.9 339 75.5
AUR62029462 Chenopodium quinoa HOM05D002880 ORTHO05D003450 1.4e-132 476.9 339 75.5
Glyma.11G077000 Glycine max HOM05D002880 ORTHO05D003450 3.1e-132 475.7 337 75.1
BraA01t00252Z Brassica rapa HOM05D002880 ORTHO05D003450 7.0e-132 474.6 358 70.4
BraA09t36808Z Brassica rapa HOM05D002880 ORTHO05D003450 2.0e-131 473.0 370 70.0
Carub.0007s0415 Capsella rubella HOM05D002880 ORTHO05D003450 2.0e-131 473.0 357 70.0
A01p02660 Brassica napus HOM05D002880 ORTHO05D003450 3.5e-131 472.2 358 69.8
Ah.03g148750 Amaranthus hybridus HOM05D002880 ORTHO05D003450 7.7e-131 471.1 331 76.4
HPP92_000448 Vanilla planifolia HOM05D002880 ORTHO05D003450 1.7e-130 469.9 360 68.3
C01p02960 Brassica napus HOM05D002880 ORTHO05D003450 6.5e-130 468.0 363 68.3
BolC1t00282H Brassica oleracea HOM05D002880 ORTHO05D003450 6.5e-130 468.0 363 68.3
Cpa.g.sc6.247 Carica papaya HOM05D002880 ORTHO05D003450 2.3e-127 459.5 356 71.3
Thhalv10022516m.g Eutrema salsugineum HOM05D002880 ORTHO05D003450 2.3e-127 459.5 331 73.7
TPR.G18175 Trifolium pratense HOM05D002880 ORTHO05D003450 2.9e-122 442.6 358 65.1
AagrBONN_evm.TU.Sc2ySwM_368.861 Anthoceros agrestis HOM05D002880 ORTHO05D003450 4.2e-121 438.7 357 65.0
CAN.G1671.12 Capsicum annuum HOM05D002880 ORTHO05D003450 8.0e-120 434.5 454 57.5
Mapoly0010s0094 Marchantia polymorpha HOM05D002880 ORTHO05D003450 8.0e-120 434.5 357 64.4
Pp3c17_20000 Physcomitrium patens HOM05D002880 ORTHO05D003450 2.3e-119 433.0 358 64.2
Duzib147G0886 Durio zibethinus HOM05D002880 ORTHO05D003450 1.4e-116 423.7 357 63.6
Lj6g0023005 Lotus japonicus HOM05D002880 ORTHO05D003450 7.7e-115 417.9 357 63.0
CBR_g31691 Chara braunii HOM05D002880 ORTHO05D003450 5.7e-110 401.7 360 60.3
Actinidia22981 Actinidia chinensis HOM05D002880 ORTHO05D003450 8.0e-104 381.3 297 70.7
Aa31LG6G13030 Aethionema arabicum HOM05D002880 ORTHO05D003450 3.9e-98 362.5 332 62.7
SHI08554 Sapria himalayana HOM05D002880 ORTHO05D003450 3.3e-97 359.4 287 66.6
Gohir.A02G170550 Gossypium hirsutum HOM05D002880 ORTHO05D003450 7.3e-97 358.2 271 69.7
MD15G1245900 Malus domestica HOM05D002880 ORTHO05D003450 7.3e-97 358.2 267 73.0
MD02G1132600 Malus domestica HOM05D002880 ORTHO05D003450 4.0e-95 352.4 261 73.6
vmacro21921 Vaccinium macrocarpon HOM05D002880 ORTHO05D003450 8.9e-95 351.3 278 70.1
SMO147G0347 Selaginella moellendorffii HOM05D002880 ORTHO05D003450 2.8e-88 329.7 359 51.8
Nitab4.5_0003382g0080 Nicotiana tabacum HOM05D002880 ORTHO05D003450 2.8e-80 303.1 334 54.5
Nitab4.5_0005660g0030 Nicotiana tabacum HOM05D002880 ORTHO05D003450 9.9e-70 268.1 269 57.2
MCO16G028 Micromonas commoda HOM05D002880 ORTHO05D003450 3.8e-69 266.2 307 47.9
PRCOL_00005144 Prasinoderma coloniale HOM05D002880 ORTHO05D003450 1.1e-63 248.1 476 35.5
ATR0259G001 Amborella trichopoda HOM05D002880 ORTHO05D003450 2.4e-63 246.9 213 64.3
TAR381G0408 Trochodendron aralioides HOM05D002880 ORTHO05D003450 1.3e-56 224.6 133 85.7
ATR0560G004 Amborella trichopoda HOM05D002880 ORTHO05D003450 5.3e-55 219.2 126 84.1
ATR0633G003 Amborella trichopoda HOM05D002880 ORTHO05D003450 5.3e-55 219.2 126 84.1
Hma1.2p1_0258F.1_g104160 Hydrangea macrophylla HOM05D002880 ORTHO05D003450 7.4e-49 198.7 270 47.4
TAR625G0893 Trochodendron aralioides HOM05D002880 ORTHO05D003450 1.5e-46 191.0 101 93.1
Cre02.g088750 Chlamydomonas reinhardtii HOM05D002880 ORTHO05D003450 3.3e-41 173.3 379 30.3
MELO3C027087.2 Cucumis melo HOM05D002880 ORTHO05D003450 3.7e-32 143.3 164 53.0
vmacro21922 Vaccinium macrocarpon HOM05D002880 ORTHO05D003450 4.1e-31 139.8 73 93.2
COL.COLO4_21196 Corchorus olitorius HOM05D002880 ORTHO05D003450 9.0e-31 138.7 101 71.3
Cfa023980 Carpinus fangiana HOM05D002880 ORTHO05D003450 7.7e-30 135.6 359 30.1
COL.COLO4_21736 Corchorus olitorius HOM05D002880 ORTHO05D003450 2.2e-29 134.0 101 69.3
BcaC04g22939 Brassica carinata HOM05D002880 ORTHO05D003450 5.0e-29 132.9 71 91.5
COL.COLO4_11117 Corchorus olitorius HOM05D002880 ORTHO05D003450 1.6e-27 127.9 81 75.3
Actinidia00882 Actinidia chinensis HOM05D002880 ORTHO05D003450 1.1e-25 121.7 67 89.6
MELO3C000137.2 Cucumis melo HOM05D002880 ORTHO05D003450 1.1e-23 115.2 72 83.3
SHI08553 Sapria himalayana HOM05D002880 ORTHO05D003450 9.1e-23 112.1 67 83.6
Lsat_1_v5_gn_9_110060 Lactuca sativa HOM05D002880 ORTHO05D002254 2.4e-15 87.4 53 81.1
Lsat_1_v5_gn_4_55920 Lactuca sativa HOM05D002880 ORTHO05D003450 1.1e-12 78.6 45 82.2
AL5G13110 Arabidopsis lyrata HOM05D002880 ORTHO05D003450 1.0e-10 72.0 101 46.5
Zm00001eb044690 Zea mays HOM05D000173 ORTHO05D000316 4.1e-07 60.1 41 68.3


User provided reference genes

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