Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g06890_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 5.0e-82 307.8 158 100.0
MBI14_g46625_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 1.1e-68 263.5 152 91.4
MBI17_g25803_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 6.7e-63 244.2 126 98.4
MBI15_g33601_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D015686 1.7e-58 229.6 131 92.4
MBI07_g31313_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 2.2e-37 159.5 87 95.4
PSO170G6221 Papaver somniferum HOM05D000836 ORTHO05D000709 3.5e-35 152.1 89 86.5
PSO674G0107 Papaver somniferum HOM05D000836 ORTHO05D000709 3.5e-35 152.1 89 86.5
MBI10_g18939_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 6.6e-34 147.9 87 88.5
TAR636G0232 Trochodendron aralioides HOM05D000836 ORTHO05D000709 1.2e-32 143.7 88 83.0
TAR365G0060 Trochodendron aralioides HOM05D000836 ORTHO05D000709 1.8e-31 139.8 88 84.1
Aqoxy5G00074 Aquilegia oxysepala HOM05D000836 ORTHO05D000709 3.0e-31 139.0 96 75.0
Actinidia09484 Actinidia chinensis HOM05D000836 ORTHO05D000709 1.3e-29 133.7 89 76.4
Lj2A1132G71 Lonicera japonica HOM05D000836 ORTHO05D000709 2.9e-29 132.5 91 74.7
CSS0023634 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 8.3e-29 131.0 87 75.9
CSS0049393 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 8.3e-29 131.0 87 75.9
GSVIVG01028646001 Vitis vinifera HOM05D000836 ORTHO05D000709 8.3e-29 131.0 90 75.6
ATR0736G039 Amborella trichopoda HOM05D000836 ORTHO05D000709 1.1e-28 130.6 87 74.7
Lj1C85G3 Lonicera japonica HOM05D000836 ORTHO05D000709 1.8e-28 129.8 89 73.0
Cc01_g17100 Coffea canephora HOM05D000836 ORTHO05D000709 5.4e-28 128.3 89 73.0
QL09p054646 Quercus lobata HOM05D000836 ORTHO05D000709 7.0e-28 127.9 87 73.6
Ca_07520_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 1.6e-27 126.7 89 71.9
Nn1g07846 Nelumbo nucifera HOM05D000836 ORTHO05D000709 2.0e-27 126.3 88 76.1
Zm00001eb258660 Zea mays HOM05D000836 ORTHO05D000709 2.0e-27 126.3 89 76.4
vmacro14755 Vaccinium macrocarpon HOM05D000836 ORTHO05D000709 2.7e-27 125.9 86 73.3
Psat3g144760 Pisum sativum HOM05D000836 ORTHO05D000709 4.6e-27 125.2 89 71.9
Actinidia37590 Actinidia chinensis HOM05D000836 ORTHO05D000709 5.9e-27 124.8 89 68.5
Glyma.18G171100 Glycine max HOM05D000836 ORTHO05D000709 7.8e-27 124.4 89 73.0
Nitab4.5_0006192g0020 Nicotiana tabacum HOM05D000836 ORTHO05D000709 1.3e-26 123.6 89 71.9
Thecc.04G205800 Theobroma cacao HOM05D000836 ORTHO05D000709 1.3e-26 123.6 86 76.7
Oeu022256.1 Olea europaea HOM05D000836 ORTHO05D000709 2.3e-26 122.9 89 71.9
Duzib268G1331 Durio zibethinus HOM05D000836 ORTHO05D000709 3.0e-26 122.5 86 75.6
Cpa.g.sc8.161 Carica papaya HOM05D000836 ORTHO05D000709 3.9e-26 122.1 89 67.4
Glyma.08G354500 Glycine max HOM05D000836 ORTHO05D000709 3.9e-26 122.1 89 71.9
Medtr7g058460 Medicago truncatula HOM05D000836 ORTHO05D000709 3.9e-26 122.1 92 67.4
Nitab4.5_0000045g0120 Nicotiana tabacum HOM05D000836 ORTHO05D000709 3.9e-26 122.1 89 70.8
Prupe.8G203500 Prunus persica HOM05D000836 ORTHO05D000709 3.9e-26 122.1 89 70.8
COL.COLO4_10279 Corchorus olitorius HOM05D000836 ORTHO05D000709 5.0e-26 121.7 86 75.6
Hma1.2p1_0351F.1_g132890 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 5.0e-26 121.7 89 67.4
MD10G1165100 Malus domestica HOM05D000836 ORTHO05D000709 5.0e-26 121.7 89 70.8
PGSC0003DMG400017653 Solanum tuberosum HOM05D000836 ORTHO05D000709 5.0e-26 121.7 89 71.9
Solyc09g061290.3 Solanum lycopersicum HOM05D000836 ORTHO05D000709 6.6e-26 121.3 89 71.9
CiPaw.01G122500 Carya illinoinensis HOM05D000836 ORTHO05D000709 8.6e-26 120.9 86 74.4
Gohir.D10G142600 Gossypium hirsutum HOM05D000836 ORTHO05D000709 8.6e-26 120.9 86 74.4
Gorai.011G159400 Gossypium raimondii HOM05D000836 ORTHO05D000709 8.6e-26 120.9 86 74.4
Lj1g0001170 Lotus japonicus HOM05D000836 ORTHO05D000709 1.1e-25 120.6 89 69.7
MD05G1176000 Malus domestica HOM05D000836 ORTHO05D000709 1.1e-25 120.6 88 71.6
VMungo1383G3499 Vigna mungo HOM05D000836 ORTHO05D000709 1.1e-25 120.6 89 69.7
Peaxi162Scf00517g00513 Petunia axillaris HOM05D000836 ORTHO05D000709 1.9e-25 119.8 89 73.0
Haze_11597 Corylus avellana HOM05D000836 ORTHO05D000709 2.5e-25 119.4 86 73.3
Peaxi162Scf00107g00176 Petunia axillaris HOM05D000836 ORTHO05D000709 2.5e-25 119.4 88 70.5
arahy.Tifrunner.gnm1.ann1.HW9H1V Arachis hypogaea HOM05D000836 ORTHO05D000709 5.6e-25 118.2 89 68.5
CiPaw.03G150200 Carya illinoinensis HOM05D000836 ORTHO05D000709 5.6e-25 118.2 89 66.3
Sopen09g024030 Solanum pennellii HOM05D000836 ORTHO05D000709 5.6e-25 118.2 89 73.0
CiPaw.02G067000 Carya illinoinensis HOM05D000836 ORTHO05D000709 9.5e-25 117.5 100 65.0
THA.LOC104801044 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 9.5e-25 117.5 86 72.1
CAN.G771.72 Capsicum annuum HOM05D000836 ORTHO05D000709 1.2e-24 117.1 89 70.8
Ciclev10023309m.g Citrus clementina HOM05D000836 ORTHO05D000709 1.2e-24 117.1 92 63.0
Sabra02G0184200 Salix brachista HOM05D000836 ORTHO05D000709 1.2e-24 117.1 92 62.0
Ca_26499_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 1.6e-24 116.7 101 64.4
Ca_29745_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 1.6e-24 116.7 101 64.4
Gohir.A03G093900 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.6e-24 116.7 86 73.3
Gohir.D02G123100 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.6e-24 116.7 86 73.3
Gorai.005G131200 Gossypium raimondii HOM05D000836 ORTHO05D000709 1.6e-24 116.7 86 73.3
Phvul.008G125400 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 1.6e-24 116.7 88 68.2
arahy.Tifrunner.gnm1.ann1.050HUA Arachis hypogaea HOM05D000836 ORTHO05D000709 2.1e-24 116.3 89 67.4
Cpa.g.sc59.128 Carica papaya HOM05D000836 ORTHO05D000709 2.1e-24 116.3 100 67.0
Lalb_Chr12g0209701 Lupinus albus HOM05D000836 ORTHO05D000709 2.1e-24 116.3 89 68.5
Duzib151G0556 Durio zibethinus HOM05D000836 ORTHO05D000709 4.7e-24 115.2 84 73.8
Lalb_Chr03g0036201 Lupinus albus HOM05D000836 ORTHO05D000709 6.2e-24 114.8 101 64.4
Duzib133G0531 Durio zibethinus HOM05D000836 ORTHO05D000709 8.0e-24 114.4 89 65.2
Hma1.2p1_1089F.1_g255650 Hydrangea macrophylla HOM05D000836 ORTHO05D015686 8.0e-24 114.4 89 65.2
Hma1.2p1_1934F.1_g308115 Hydrangea macrophylla HOM05D000836 ORTHO05D015686 8.0e-24 114.4 89 65.2
Hma1.2p1_1934F.1_g308120 Hydrangea macrophylla HOM05D000836 ORTHO05D015686 8.0e-24 114.4 89 65.2
CAN.G122.3 Capsicum annuum HOM05D000836 ORTHO05D000709 1.0e-23 114.0 89 66.3
ECA248G0109 Erigeron canadensis HOM05D000836 ORTHO05D000709 1.0e-23 114.0 85 65.9
HPP92_014749 Vanilla planifolia HOM05D000836 ORTHO05D000709 1.0e-23 114.0 87 64.4
Manes.13G045500 Manihot esculenta HOM05D000836 ORTHO05D000709 1.8e-23 113.2 89 65.2
Nitab4.5_0003866g0030 Nicotiana tabacum HOM05D000836 ORTHO05D000709 2.3e-23 112.8 89 70.8
Potri.002G241800 Populus trichocarpa HOM05D000836 ORTHO05D000709 2.3e-23 112.8 92 60.9
Glyma.02G164700 Glycine max HOM05D000836 ORTHO05D000709 3.1e-23 112.5 86 69.8
Glyma.10G102400 Glycine max HOM05D000836 ORTHO05D000709 3.1e-23 112.5 86 69.8
Phvul.007G244700 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 3.1e-23 112.5 100 64.0
SalBow2G2753 Salvia bowleyana HOM05D000836 ORTHO05D000709 3.1e-23 112.5 88 67.0
VMungo0720G2087 Vigna mungo HOM05D000836 ORTHO05D000709 3.1e-23 112.5 86 69.8
AT2G32700 Arabidopsis thaliana HOM05D000836 ORTHO05D000709 4.0e-23 112.1 97 66.0
MSTRG.17552 Avicennia marina HOM05D000836 ORTHO05D000709 4.0e-23 112.1 89 67.4
Duzib138G1320 Durio zibethinus HOM05D000836 ORTHO05D000709 4.0e-23 112.1 92 62.0
Nitab4.5_0012093g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 5.2e-23 111.7 89 70.8
Prupe.1G005700 Prunus persica HOM05D000836 ORTHO05D000709 5.2e-23 111.7 86 69.8
Solyc06g083460.4 Solanum lycopersicum HOM05D000836 ORTHO05D000709 5.2e-23 111.7 90 70.0
Sopen06g034840 Solanum pennellii HOM05D000836 ORTHO05D000709 5.2e-23 111.7 90 70.0
PGSC0003DMG400020093 Solanum tuberosum HOM05D000836 ORTHO05D000709 5.2e-23 111.7 90 70.0
TWI73G0286 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 8.9e-23 110.9 86 67.4
Carub.0004s1406 Capsella rubella HOM05D000836 ORTHO05D000709 1.5e-22 110.2 97 63.9
Lalb_Chr01g0010231 Lupinus albus HOM05D000836 ORTHO05D000709 2.0e-22 109.8 100 60.0
Sp4g15040 Schrenkiella parvula HOM05D000836 ORTHO05D000709 2.0e-22 109.8 97 63.9
TWI36G1193 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 2.0e-22 109.8 88 63.6
HanXRQChr00c0028g0571141 Helianthus annuus HOM05D000836 ORTHO05D000709 2.6e-22 109.4 84 65.5
MD04G1005500 Malus domestica HOM05D000836 ORTHO05D000709 2.6e-22 109.4 86 67.4
Psat6g130000 Pisum sativum HOM05D000836 ORTHO05D000709 3.4e-22 109.0 97 62.9
Atru.chr4.1725 Acer truncatum HOM05D000836 ORTHO05D000709 4.4e-22 108.6 90 67.8
Migut.D00533 Erythranthe guttata HOM05D000836 ORTHO05D000709 4.4e-22 108.6 91 64.8
Thhalv10016303m.g Eutrema salsugineum HOM05D000836 ORTHO05D000709 7.5e-22 107.8 97 62.9
Thecc.01G226600 Theobroma cacao HOM05D000836 ORTHO05D000709 7.5e-22 107.8 88 61.4
AL4G28140 Arabidopsis lyrata HOM05D000836 ORTHO05D000709 9.8e-22 107.5 98 65.3
Gohir.A07G201400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 9.8e-22 107.5 89 61.8
Gohir.D07G207700 Gossypium hirsutum HOM05D000836 ORTHO05D000709 9.8e-22 107.5 89 61.8
Os04g0510200 Oryza sativa ssp. japonica HOM05D000836 ORTHO05D000709 9.8e-22 107.5 90 66.7
CARHR126590 Cardamine hirsuta HOM05D000836 ORTHO05D000709 1.3e-21 107.1 82 70.7
Potri.001G049400 Populus trichocarpa HOM05D000836 ORTHO05D000709 1.3e-21 107.1 98 61.2
Sabra03G0130900 Salix brachista HOM05D000836 ORTHO05D000709 1.3e-21 107.1 90 62.2
Lsat_1_v5_gn_5_179300 Lactuca sativa HOM05D000836 ORTHO05D000709 1.7e-21 106.7 87 63.2
TPR.G7604 Trifolium pratense HOM05D000836 ORTHO05D000709 1.7e-21 106.7 104 57.7
Manes.15G052600 Manihot esculenta HOM05D000836 ORTHO05D000709 2.2e-21 106.3 86 65.1
RcHm_v2.0_Chr4g0385971 Rosa chinensis HOM05D000836 ORTHO05D000709 3.7e-21 105.5 86 67.4
Gorai.001G234100 Gossypium raimondii HOM05D000836 ORTHO05D000709 4.9e-21 105.1 89 60.7
Lj1g0022487 Lotus japonicus HOM05D000836 ORTHO05D000709 6.4e-21 104.8 84 67.9
Manes.03G148800 Manihot esculenta HOM05D000836 ORTHO05D000709 1.4e-20 103.6 86 64.0
Oeu009725.1 Olea europaea HOM05D000836 ORTHO05D000709 1.4e-20 103.6 82 64.6
Potri.003G178600 Populus trichocarpa HOM05D000836 ORTHO05D000709 1.4e-20 103.6 90 63.3
Aa31LG5G4350 Aethionema arabicum HOM05D000836 ORTHO05D000709 3.2e-20 102.4 94 59.6
MSTRG.21421 Avicennia marina HOM05D000836 ORTHO05D000709 3.2e-20 102.4 89 64.0
FAN17G0254 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.2e-20 102.4 98 60.2
PGR083G2075 Punica granatum HOM05D000836 ORTHO05D000709 3.2e-20 102.4 85 60.0
SGA_v2.0_scaffold1G00745 Striga asiatica HOM05D000836 ORTHO05D000709 3.2e-20 102.4 89 61.8
Sabra01G0034200 Salix brachista HOM05D000836 ORTHO05D000709 4.1e-20 102.1 98 58.2
Ciclev10004358m.g Citrus clementina HOM05D000836 ORTHO05D000709 7.0e-20 101.3 103 61.2
Medtr7g058440 Medicago truncatula HOM05D000836 ORTHO05D000709 7.0e-20 101.3 92 59.8
RcHm_v2.0_Chr6g0284941 Rosa chinensis HOM05D000836 ORTHO05D000709 9.2e-20 100.9 87 64.4
ClCG05G003390 Citrullus lanatus HOM05D000836 ORTHO05D000709 1.2e-19 100.5 86 67.4
FvH4_4g00520 Fragaria vesca HOM05D000836 ORTHO05D000709 1.2e-19 100.5 98 58.2
SGA_v2.0_scaffold8G04645 Striga asiatica HOM05D000836 ORTHO05D000709 1.2e-19 100.5 88 61.4
Medtr1g050340 Medicago truncatula HOM05D000836 ORTHO05D000709 1.6e-19 100.1 85 64.7
FAN12G4032 Fragaria x ananassa HOM05D000836 ORTHO05D000709 2.0e-19 99.8 98 57.1
Oeu023090.1 Olea europaea HOM05D000836 ORTHO05D000709 2.0e-19 99.8 85 64.7
FAN22G1004 Fragaria x ananassa HOM05D000836 ORTHO05D000709 4.6e-19 98.6 98 58.2
CDE02G2853 Ceratophyllum demersum HOM05D000836 ORTHO05D000709 6.0e-19 98.2 80 66.2
Eucgr.H00801 Eucalyptus grandis HOM05D000836 ORTHO05D000709 7.8e-19 97.8 86 58.1
FAN15G3190 Fragaria x ananassa HOM05D000836 ORTHO05D000709 7.8e-19 97.8 86 65.1
FAN27G2627 Fragaria x ananassa HOM05D000836 ORTHO05D000709 7.8e-19 97.8 86 65.1
TWI53G1423 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 7.8e-19 97.8 96 57.3
Sed0000820 Sechium edule HOM05D000836 ORTHO05D000709 1.0e-18 97.4 101 57.4
Sed0006740 Sechium edule HOM05D000836 ORTHO05D000709 1.0e-18 97.4 81 65.4
Eucgr.H00067 Eucalyptus grandis HOM05D000836 ORTHO05D000709 1.7e-18 96.7 86 65.1
HPP92_020753 Vanilla planifolia HOM05D000836 ORTHO05D000709 1.7e-18 96.7 83 55.4
BcaB01g03965 Brassica carinata HOM05D000836 ORTHO05D000709 2.3e-18 96.3 98 59.2
FvH4_2g19160 Fragaria vesca HOM05D000836 ORTHO05D000709 2.3e-18 96.3 86 64.0
FAN24G1148 Fragaria x ananassa HOM05D000836 ORTHO05D000709 2.3e-18 96.3 86 64.0
BcaB02g10491 Brassica carinata HOM05D000836 ORTHO05D000709 3.0e-18 95.9 82 67.1
MELO3C006318.2 Cucumis melo HOM05D000836 ORTHO05D000709 5.0e-18 95.1 86 64.0
Aa31LG1G20090 Aethionema arabicum HOM05D002511 ORTHO05D000709 6.6e-18 94.7 91 62.6
CAN.G587.65 Capsicum annuum HOM05D000836 ORTHO05D000709 8.6e-18 94.4 83 60.2
THA.LOC104808783 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 1.1e-17 94.0 90 56.7
BcaC01g05896 Brassica carinata HOM05D000836 ORTHO05D000709 3.3e-17 92.4 98 58.2
BolC3t14513H Brassica oleracea HOM05D000836 ORTHO05D000709 3.3e-17 92.4 98 58.2
Gohir.D11G143800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 4.3e-17 92.0 87 56.3
Gorai.007G154000 Gossypium raimondii HOM05D000836 ORTHO05D000709 4.3e-17 92.0 87 56.3
BcaC02g11353 Brassica carinata HOM05D000836 ORTHO05D000709 5.6e-17 91.7 97 56.7
C04p16930 Brassica napus HOM05D000836 ORTHO05D000709 5.6e-17 91.7 97 56.7
BraA05t20231Z Brassica rapa HOM05D000836 ORTHO05D000709 7.3e-17 91.3 97 56.7
CsaV3_3G011040 Cucumis sativus L. HOM05D000836 ORTHO05D000709 9.5e-17 90.9 78 64.1
BolC4t23252H Brassica oleracea HOM05D000836 ORTHO05D000709 1.6e-16 90.1 97 55.7
C03p21310 Brassica napus HOM05D000836 ORTHO05D000709 3.6e-16 89.0 98 56.1
PGR142G1073 Punica granatum HOM05D000836 ORTHO05D000709 3.6e-16 89.0 86 60.5
A05p12910 Brassica napus HOM05D000836 ORTHO05D000709 4.7e-16 88.6 80 62.5
Gohir.A11G137400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.2e-16 88.2 88 53.4
A03p18260 Brassica napus HOM05D000836 ORTHO05D000709 1.4e-15 87.0 94 54.3
BraA03t11086Z Brassica rapa HOM05D000836 ORTHO05D000709 1.4e-15 87.0 94 54.3
unitig_8.g3756 Utricularia gibba HOM05D000836 ORTHO05D000709 4.0e-15 85.5 89 51.7
CANSAT78G1202 Cannabis sativa HOM05D000836 ORTHO05D000709 5.2e-15 85.1 63 74.6
ECA247G1726 Erigeron canadensis HOM05D000836 ORTHO05D000709 6.8e-15 84.7 84 51.2
BcaB06g28627 Brassica carinata HOM05D000836 ORTHO05D000709 1.7e-13 80.1 137 43.8
Lsat_1_v5_gn_9_12200 Lactuca sativa HOM05D000836 ORTHO05D000709 1.7e-13 80.1 95 49.5
CAN.G625.42 Capsicum annuum HOM05D000836 ORTHO05D000709 3.5e-11 72.4 60 60.0
Migut.N02267 Erythranthe guttata HOM05D000836 ORTHO05D000709 1.3e-10 70.5 89 50.6
C04p62300 Brassica napus HOM05D000836 ORTHO05D000709 3.0e-10 69.3 64 60.9
GSVIVG01026712001 Vitis vinifera HOM05D000836 ORTHO05D015686 5.1e-10 68.6 47 72.3
Os03g0860900 Oryza sativa ssp. japonica HOM05D000836 ORTHO05D000709 6.6e-10 68.2 83 48.2
HanXRQChr10g0279751 Helianthus annuus HOM05D000836 ORTHO05D000709 1.5e-09 67.0 91 42.9
Nn3g19956 Nelumbo nucifera HOM05D000836 ORTHO05D000709 2.5e-09 66.2 46 76.1


User provided reference genes

Program Settings