Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g43495_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 8.9e-54 213.4 111 100.0
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 9.6e-32 140.2 79 91.1
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 2.8e-31 138.7 79 88.6
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 3.7e-31 138.3 79 89.9
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 3.7e-31 138.3 79 87.3
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 3.7e-31 138.3 79 87.3
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 3.7e-31 138.3 79 88.6
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 3.7e-31 138.3 79 87.3
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 88.6
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 89.9
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 89.9
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 87.3
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 88.6
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 6.2e-31 137.5 79 89.9
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 8.1e-31 137.1 79 87.3
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 8.1e-31 137.1 79 87.3
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 8.1e-31 137.1 79 88.6
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 8.1e-31 137.1 79 89.9
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 1.1e-30 136.7 79 88.6
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 1.1e-30 136.7 79 88.6
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 1.1e-30 136.7 79 89.9
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 84.8
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 88.6
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 88.6
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 87.3
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 87.3
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 86.1
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 86.1
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 88.6
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 1.4e-30 136.3 79 88.6
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 1.8e-30 136.0 79 86.1
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 1.8e-30 136.0 79 86.1
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 2.4e-30 135.6 79 87.3
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 2.4e-30 135.6 79 83.5
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 3.1e-30 135.2 79 86.1
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.1e-30 135.2 79 87.3
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.1e-30 135.2 79 88.6
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 3.1e-30 135.2 79 87.3
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 3.1e-30 135.2 92 76.1
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 4.0e-30 134.8 79 84.8
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 5.3e-30 134.4 79 86.1
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 6.9e-30 134.0 79 86.1
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 6.9e-30 134.0 79 84.8
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 6.9e-30 134.0 79 86.1
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 6.9e-30 134.0 79 84.8
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 6.9e-30 134.0 79 86.1
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 9.0e-30 133.7 79 84.8
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 9.0e-30 133.7 79 84.8
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 9.0e-30 133.7 79 84.8
MBI09_g22510_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 9.0e-30 133.7 78 87.2
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 9.0e-30 133.7 79 86.1
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 9.0e-30 133.7 79 86.1
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 87.3
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 87.3
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 86.1
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 86.1
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 84.8
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 86.1
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 1.2e-29 133.3 80 82.5
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 1.2e-29 133.3 79 86.1
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 1.5e-29 132.9 79 86.1
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.5e-29 132.9 79 83.5
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 2.0e-29 132.5 79 84.8
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 2.0e-29 132.5 79 83.5
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 2.0e-29 132.5 79 83.5
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 2.6e-29 132.1 79 83.5
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 3.4e-29 131.7 79 83.5
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 4.5e-29 131.3 79 86.1
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 4.5e-29 131.3 79 82.3
MBI16_g03604_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 4.5e-29 131.3 79 84.8
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 5.8e-29 131.0 79 82.3
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 5.8e-29 131.0 79 82.3
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 5.8e-29 131.0 79 83.5
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 7.6e-29 130.6 79 83.5
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 9.9e-29 130.2 79 82.3
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 9.9e-29 130.2 79 82.3
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 9.9e-29 130.2 79 82.3
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 9.9e-29 130.2 79 84.8
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 1.3e-28 129.8 79 82.3
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 1.3e-28 129.8 79 84.8
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 1.3e-28 129.8 79 84.8
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.3e-28 129.8 79 84.8
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 2.9e-28 128.6 79 82.3
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 2.9e-28 128.6 79 82.3
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.9e-28 128.6 79 83.5
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.8e-28 128.3 79 81.0
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.8e-28 128.3 79 81.0
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 4.9e-28 127.9 79 83.5
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
BcaC08g43619 Brassica carinata HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.4e-27 126.3 79 83.5
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 1.9e-27 125.9 79 82.3
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 1.9e-27 125.9 79 82.3
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 1.9e-27 125.9 79 82.3
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 1.9e-27 125.9 79 81.0
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 2.4e-27 125.6 79 81.0
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 2.4e-27 125.6 99 71.7
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 3.2e-27 125.2 79 79.7
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 7.1e-27 124.0 79 82.3
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 1.2e-26 123.2 79 75.9
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.6e-26 122.9 79 78.5
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.6e-26 122.9 79 78.5
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 4.6e-26 121.3 79 79.7
MBI09_g27980_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 6.0e-26 120.9 74 81.1
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 7.9e-26 120.6 79 75.9
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 1.8e-25 119.4 79 78.5
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 6.7e-25 117.5 79 75.9
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 8.7e-25 117.1 79 74.7
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 2.5e-24 115.5 79 77.2
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 5.6e-24 114.4 79 72.2
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 2.1e-23 112.5 111 59.5
AUR62040902 Chenopodium quinoa HOM05D002496 ORTHO05D002787 2.3e-17 92.4 56 80.4
C03p92650 Brassica napus HOM05D002496 ORTHO05D002787 1.7e-12 76.3 48 77.1
Aqoxy1G02997 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 5.5e-11 71.2 104 46.2
CAN.G792.4 Capsicum annuum HOM05D002496 ORTHO05D002787 1.8e-06 56.2 33 78.8


User provided reference genes

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