Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.0e-48 194.1 99 100.0
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 8.6e-40 166.8 95 90.5
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 9.8e-36 153.3 97 84.5
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.3e-31 138.3 91 74.7
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.6e-30 136.0 84 85.7
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.6e-30 136.0 95 71.6
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 6.1e-30 134.0 95 71.6
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.0e-29 133.3 95 73.7
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.3e-29 132.1 100 69.0
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 4.4e-28 127.9 94 67.0
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 3.7e-27 124.8 94 69.1
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 8.3e-27 123.6 92 66.3
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 89 68.5
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 89 68.5
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 89 68.5
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 1.4e-26 122.9 89 67.4
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.4e-26 122.9 90 68.9
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 2.4e-26 122.1 95 66.3
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 3.2e-26 121.7 90 64.4
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 3.2e-26 121.7 86 68.6
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.1e-26 121.3 93 65.6
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 4.1e-26 121.3 92 66.3
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 7.0e-26 120.6 95 65.3
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 7.0e-26 120.6 90 64.4
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 7.0e-26 120.6 90 67.8
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 9.2e-26 120.2 93 65.6
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 9.2e-26 120.2 93 65.6
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 9.2e-26 120.2 90 65.6
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 9.2e-26 120.2 90 65.6
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 1.2e-25 119.8 94 64.9
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 1.2e-25 119.8 90 64.4
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 1.6e-25 119.4 90 64.4
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.6e-25 119.4 91 65.9
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.6e-25 119.4 91 64.8
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 2.0e-25 119.0 91 69.2
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 2.0e-25 119.0 92 66.3
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.0e-25 119.0 90 65.6
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 2.7e-25 118.6 93 65.6
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 2.7e-25 118.6 92 64.1
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 2.7e-25 118.6 93 65.6
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.7e-25 118.6 90 65.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.7e-25 118.6 90 65.6
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 2.7e-25 118.6 91 63.7
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 2.7e-25 118.6 90 66.7
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.5e-25 118.2 93 62.4
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 3.5e-25 118.2 93 65.6
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.5e-25 118.2 92 60.9
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.5e-25 118.2 92 60.9
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 4.6e-25 117.9 89 65.2
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 4.6e-25 117.9 91 67.0
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 4.6e-25 117.9 93 65.6
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 4.6e-25 117.9 93 65.6
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.6e-25 117.9 90 61.1
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.6e-25 117.9 90 62.2
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 5.9e-25 117.5 93 65.6
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 5.9e-25 117.5 93 63.4
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 5.9e-25 117.5 92 67.4
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 5.9e-25 117.5 93 64.5
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 5.9e-25 117.5 90 64.4
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 7.8e-25 117.1 93 64.5
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.8e-25 117.1 90 64.4
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 7.8e-25 117.1 91 67.0
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.0e-24 116.7 92 66.3
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 1.0e-24 116.7 95 65.3
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 1.0e-24 116.7 94 63.8
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 1.3e-24 116.3 90 64.4
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 1.3e-24 116.3 90 64.4
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 1.3e-24 116.3 89 65.2
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 1.3e-24 116.3 93 61.3
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.3e-24 116.3 93 62.4
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.7e-24 115.9 90 63.3
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.7e-24 115.9 94 63.8
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.7e-24 115.9 92 65.2
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.7e-24 115.9 90 61.1
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.3e-24 115.5 93 60.2
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 2.3e-24 115.5 89 65.2
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 2.3e-24 115.5 98 58.2
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 2.3e-24 115.5 90 64.4
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.3e-24 115.5 93 63.4
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 2.3e-24 115.5 89 66.3
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 3.0e-24 115.2 90 64.4
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 3.0e-24 115.2 89 67.4
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 3.0e-24 115.2 95 62.1
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 3.0e-24 115.2 95 66.3
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 3.9e-24 114.8 92 65.2
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 3.9e-24 114.8 89 64.0
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.9e-24 114.8 92 64.1
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 5.0e-24 114.4 93 62.4
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 5.0e-24 114.4 93 62.4
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 5.0e-24 114.4 93 64.5
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 6.6e-24 114.0 89 65.2
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 6.6e-24 114.0 93 63.4
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 8.6e-24 113.6 93 62.4
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 8.6e-24 113.6 88 64.8
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 8.6e-24 113.6 88 60.2
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 1.1e-23 113.2 89 65.2
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 1.5e-23 112.8 80 63.8
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.5e-23 112.8 95 63.2
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 1.5e-23 112.8 93 62.4
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.9e-23 112.5 91 58.2
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.9e-23 112.5 90 57.8
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 1.9e-23 112.5 89 66.3
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 2.5e-23 112.1 93 60.2
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.3e-23 111.7 90 63.3
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 3.3e-23 111.7 92 64.1
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 3.3e-23 111.7 90 63.3
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 3.3e-23 111.7 79 65.8
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.3e-23 111.7 92 64.1
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 3.3e-23 111.7 88 58.0
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.3e-23 111.7 92 63.0
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 4.3e-23 111.3 90 62.2
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 4.3e-23 111.3 79 69.6
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 4.3e-23 111.3 92 63.0
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 4.3e-23 111.3 90 62.2
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 5.6e-23 110.9 92 62.0
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 5.6e-23 110.9 79 64.6
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 7.3e-23 110.5 92 64.1
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 9.5e-23 110.2 89 62.9
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 9.5e-23 110.2 88 61.4
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 9.5e-23 110.2 92 60.9
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.2e-22 109.8 90 63.3
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 1.2e-22 109.8 92 65.2
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 1.6e-22 109.4 91 65.9
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 2.1e-22 109.0 92 64.1
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 2.1e-22 109.0 96 57.3
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 2.1e-22 109.0 92 60.9
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.8e-22 108.6 91 63.7
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 2.8e-22 108.6 90 61.1
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 2.8e-22 108.6 90 62.2
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 2.8e-22 108.6 85 58.8
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.6e-22 108.2 93 61.3
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 4.7e-22 107.8 90 62.2
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 8.0e-22 107.1 92 63.0
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.1e-21 106.7 92 56.5
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.4e-21 106.3 93 59.1
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 1.8e-21 105.9 93 57.0
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.3e-21 105.5 90 62.2
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.3e-21 105.5 79 60.8
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 2.3e-21 105.5 78 66.7
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 4.0e-21 104.8 90 61.1
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 4.0e-21 104.8 90 61.1
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 4.0e-21 104.8 91 59.3
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 4.0e-21 104.8 92 60.9
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 4.0e-21 104.8 95 56.8
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 5.2e-21 104.4 94 54.3
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 5.2e-21 104.4 95 60.0
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 6.8e-21 104.0 92 58.7
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 4.4e-20 101.3 95 55.8
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 1.7e-19 99.4 77 64.9
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 1.4e-18 96.3 90 56.7
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.4e-18 95.5 95 58.9
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 3.2e-18 95.1 81 59.3
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 4.6e-17 91.3 92 53.3
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.3e-16 89.0 78 57.7
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 3.9e-16 88.2 83 59.0
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 3.9e-16 88.2 90 50.0
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 3.3e-15 85.1 80 57.5
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 1.8e-13 79.3 64 62.5
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 2.3e-13 79.0 94 43.6
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.1e-13 78.6 66 53.0
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 6.8e-13 77.4 72 54.2
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 6.8e-13 77.4 61 57.4
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 1.5e-12 76.3 66 54.5
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.2e-10 68.6 52 73.1
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 3.2e-10 68.6 52 73.1
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 4.6e-09 64.7 69 40.6
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.3e-08 62.4 73 37.0
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 3.0e-08 62.0 87 35.6
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 5.1e-08 61.2 71 39.4
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 3.3e-07 58.5 39 64.1
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 4.7e-06 54.7 47 53.2


User provided reference genes

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