Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g14579_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.9e-31 137.5 69 100.0
MBI01_g03586_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.0e-28 127.5 66 97.0
MBI13_g41189_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.0e-28 127.5 66 97.0
MBI07_g38547_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.2e-27 125.9 66 95.5
MBI16_g19191_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.5e-27 125.6 66 95.5
MBI12_g02352_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 1.3e-10 69.3 35 94.3
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 2.9e-10 68.2 35 94.3
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 2.9e-10 68.2 35 94.3
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.9e-09 65.5 60 55.0
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 2.4e-09 65.1 60 55.0
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 3.2e-09 64.7 60 53.3
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 5.4e-09 63.9 61 54.1
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.2e-08 62.8 62 53.2
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.2e-08 62.8 62 48.4
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 4.6e-08 60.8 61 47.5
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 1.0e-07 59.7 60 48.3
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 1.0e-07 59.7 60 48.3
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 1.0e-07 59.7 61 52.5
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 3.0e-07 58.2 60 53.3
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 3.9e-07 57.8 60 48.3
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 3.9e-07 57.8 61 45.9
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 5.1e-07 57.4 61 50.8
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.1e-07 57.4 61 49.2
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 6.7e-07 57.0 61 52.5
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 8.7e-07 56.6 61 50.8
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 1.1e-06 56.2 60 43.3
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.5e-06 55.8 64 51.6
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 1.9e-06 55.5 61 50.8
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 2.5e-06 55.1 61 49.2
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.3e-06 54.7 61 47.5
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 3.3e-06 54.7 61 49.2
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 4.3e-06 54.3 61 47.5
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 9.6e-06 53.1 60 46.7
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 9.6e-06 53.1 60 48.3
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 9.6e-06 53.1 60 43.3
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 9.6e-06 53.1 61 45.9


User provided reference genes

Program Settings