Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g04926_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 3.9e-33 144.1 65 100.0
MBI12_g43206_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 5.1e-33 143.7 64 100.0
ATR1153G005 Amborella trichopoda HOM05D000144 ORTHO05D008375 1.9e-24 115.2 62 82.3
HanXRQChr15g0472631 Helianthus annuus HOM05D000144 ORTHO05D008375 1.3e-23 112.5 63 76.2
Solyc02g092380.4 Solanum lycopersicum HOM05D000144 ORTHO05D008375 1.6e-23 112.1 63 76.2
Sopen02g036930 Solanum pennellii HOM05D000144 ORTHO05D008375 1.6e-23 112.1 63 76.2
PGSC0003DMG400021445 Solanum tuberosum HOM05D000144 ORTHO05D008375 1.6e-23 112.1 63 76.2
CAN.G1075.36 Capsicum annuum HOM05D000144 ORTHO05D008375 2.1e-23 111.7 63 76.2
ECA246G5277 Erigeron canadensis HOM05D000144 ORTHO05D008375 2.8e-23 111.3 63 76.2
Lj7A97T18 Lonicera japonica HOM05D000144 ORTHO05D008375 2.8e-23 111.3 63 76.2
TAR381G1456 Trochodendron aralioides HOM05D000144 ORTHO05D008375 2.8e-23 111.3 63 76.2
Lsat_1_v5_gn_3_86200 Lactuca sativa HOM05D000144 ORTHO05D008375 3.7e-23 110.9 63 74.6
PSO541G5893 Papaver somniferum HOM05D000144 ORTHO05D008375 3.7e-23 110.9 63 76.2
PSO675G3797 Papaver somniferum HOM05D000144 ORTHO05D008375 3.7e-23 110.9 63 76.2
VMungo1215G0773 Vigna mungo HOM05D000144 ORTHO05D008375 3.7e-23 110.9 63 77.8
arahy.Tifrunner.gnm1.ann1.ZP9CR3 Arachis hypogaea HOM05D000144 ORTHO05D008375 4.8e-23 110.5 63 76.2
Cc07_g07080 Coffea canephora HOM05D000144 ORTHO05D008375 4.8e-23 110.5 63 73.0
Atru.chr3.1009 Acer truncatum HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 74.6
CSS0036973 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 74.6
Dinv26930 Davidia involucrata HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 74.6
Eucgr.I00705 Eucalyptus grandis HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 74.6
Nitab4.5_0000142g0040 Nicotiana tabacum HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 74.6
vmacro05409 Vaccinium macrocarpon HOM05D000144 ORTHO05D008375 6.2e-23 110.2 63 76.2
Ca_24694_v3 Cicer arietinum L. HOM05D000144 ORTHO05D008375 8.1e-23 109.8 63 76.2
Oeu014248.1 Olea europaea HOM05D000144 ORTHO05D008375 8.1e-23 109.8 63 76.2
Prupe.6G220900 Prunus persica HOM05D000144 ORTHO05D008375 8.1e-23 109.8 63 74.6
Potri.005G148900 Populus trichocarpa HOM05D000144 ORTHO05D008375 1.1e-22 109.4 63 76.2
Thecc.01G072500 Theobroma cacao HOM05D000144 ORTHO05D008375 1.1e-22 109.4 63 73.0
HPP92_024498 Vanilla planifolia HOM05D000144 ORTHO05D008375 1.1e-22 109.4 63 76.2
Actinidia11983 Actinidia chinensis HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Actinidia36432 Actinidia chinensis HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Cfa004131 Carpinus fangiana HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
COL.COLO4_11575 Corchorus olitorius HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Haze_15284 Corylus avellana HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Hma1.2p1_0852F.1_g228490 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Hma1.2p1_0852F.1_g228500 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Lalb_Chr16g0378861 Lupinus albus HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Mapoly0005s0265 Marchantia polymorpha HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 74.6
Sabra05G0118600 Salix brachista HOM05D000144 ORTHO05D008375 1.4e-22 109.0 63 76.2
Hund16400 Selenicereus undatus HOM05D000144 ORTHO05D008375 1.4e-22 109.0 62 77.4
Nn5g30589 Nelumbo nucifera HOM05D000144 ORTHO05D008375 1.8e-22 108.6 63 74.6
MSTRG.23672 Avicennia marina HOM05D000144 ORTHO05D008375 2.4e-22 108.2 63 74.6
Ciclev10025214m.g Citrus clementina HOM05D000144 ORTHO05D008375 2.4e-22 108.2 63 73.0
Phvul.002G010800 Phaseolus vulgaris HOM05D000144 ORTHO05D008375 2.4e-22 108.2 63 77.8
GSVIVG01000108001 Vitis vinifera HOM05D000144 ORTHO05D008375 2.4e-22 108.2 63 74.6
Glyma.01G194100 Glycine max HOM05D000144 ORTHO05D008375 3.1e-22 107.8 62 77.4
Glyma.11G047800 Glycine max HOM05D000144 ORTHO05D008375 3.1e-22 107.8 62 77.4
MD15G1307700 Malus domestica HOM05D000144 ORTHO05D008375 3.1e-22 107.8 63 73.0
SalBow3G3765 Salvia bowleyana HOM05D000144 ORTHO05D008375 3.1e-22 107.8 63 74.6
TWI09G0055 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 3.1e-22 107.8 63 73.0
Ah.03g140560 Amaranthus hybridus HOM05D000144 ORTHO05D008375 4.0e-22 107.5 62 77.4
CiPaw.01G004600 Carya illinoinensis HOM05D000144 ORTHO05D008375 4.0e-22 107.5 63 73.0
CDE07G1536 Ceratophyllum demersum HOM05D000144 ORTHO05D008375 4.0e-22 107.5 63 74.6
Nitab4.5_0002119g0110 Nicotiana tabacum HOM05D000144 ORTHO05D008375 5.3e-22 107.1 63 71.4
TWI73G1111 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 5.3e-22 107.1 63 71.4
ClCG01G017550 Citrullus lanatus HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 71.4
Gohir.A12G077300 Gossypium hirsutum HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 74.6
Gohir.D12G075500 Gossypium hirsutum HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 74.6
Gorai.008G083600 Gossypium raimondii HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 74.6
Oeu013322.1 Olea europaea HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 73.0
THA.LOC104827618 Tarenaya hassleriana HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 74.6
Zm00001eb007780 Zea mays HOM05D000144 ORTHO05D008375 6.9e-22 106.7 63 73.0
Pp3c18_21660 Physcomitrium patens HOM05D000144 ORTHO05D008375 9.0e-22 106.3 63 69.8
RcHm_v2.0_Chr2g0108011 Rosa chinensis HOM05D000144 ORTHO05D008375 9.0e-22 106.3 63 71.4
Sed0012214 Sechium edule HOM05D000144 ORTHO05D008375 9.0e-22 106.3 63 71.4
SGA_v2.0_scaffold15G07454 Striga asiatica HOM05D000144 ORTHO05D008375 9.0e-22 106.3 63 74.6
GSVIVG01000117001 Vitis vinifera HOM05D000144 ORTHO05D008375 9.0e-22 106.3 63 73.0
Carub.0008s2694 Capsella rubella HOM05D000144 ORTHO05D008375 1.2e-21 105.9 64 71.9
Cpa.g.sc6.18 Carica papaya HOM05D000144 ORTHO05D008375 1.2e-21 105.9 63 71.4
MELO3C007631.2 Cucumis melo HOM05D000144 ORTHO05D008375 1.2e-21 105.9 63 71.4
CsaV3_6G044090 Cucumis sativus L. HOM05D000144 ORTHO05D008375 1.2e-21 105.9 63 71.4
Aqoxy6G02612 Aquilegia oxysepala HOM05D000144 ORTHO05D008375 1.5e-21 105.5 63 74.6
arahy.Tifrunner.gnm1.ann1.L6JH5D Arachis hypogaea HOM05D000144 ORTHO05D008375 1.5e-21 105.5 63 74.6
CARHR280050 Cardamine hirsuta HOM05D000144 ORTHO05D008375 1.5e-21 105.5 64 71.9
Thhalv10003864m.g Eutrema salsugineum HOM05D000144 ORTHO05D008375 2.0e-21 105.1 64 71.9
Sp2g29120 Schrenkiella parvula HOM05D000144 ORTHO05D008375 2.0e-21 105.1 64 71.9
EL10Ac6g15620 Beta vulgaris HOM05D000144 ORTHO05D008375 2.6e-21 104.8 62 75.8
Os03g0201100 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D008375 3.4e-21 104.4 63 69.8
PGR004G0927 Punica granatum HOM05D000144 ORTHO05D008375 3.4e-21 104.4 63 73.0
A06p32890 Brassica napus HOM05D000144 ORTHO05D008375 4.5e-21 104.0 64 70.3
C03p59580 Brassica napus HOM05D000144 ORTHO05D008375 4.5e-21 104.0 64 70.3
BolC3t18222H Brassica oleracea HOM05D000144 ORTHO05D008375 4.5e-21 104.0 64 70.3
BraA06t26220Z Brassica rapa HOM05D000144 ORTHO05D008375 4.5e-21 104.0 64 70.3
Lj2g0027160 Lotus japonicus HOM05D000144 ORTHO05D008375 5.8e-21 103.6 63 74.6
Migut.H00349 Erythranthe guttata HOM05D000144 ORTHO05D008375 7.6e-21 103.2 63 73.0
BcaB02g09915 Brassica carinata HOM05D000144 ORTHO05D008375 1.0e-20 102.8 64 70.3
AL8G43770 Arabidopsis lyrata HOM05D000144 ORTHO05D008375 1.3e-20 102.4 64 68.8
AT5G67530 Arabidopsis thaliana HOM05D000144 ORTHO05D008375 1.3e-20 102.4 64 68.8
Psat2g171520 Pisum sativum HOM05D000144 ORTHO05D008375 1.3e-20 102.4 63 73.0
MD02G1185800 Malus domestica HOM05D000144 ORTHO05D008375 1.7e-20 102.1 61 73.8
TPR.G34857 Trifolium pratense HOM05D000144 ORTHO05D008375 1.7e-20 102.1 63 73.0
Medtr5g015500 Medicago truncatula HOM05D000144 ORTHO05D008375 2.9e-20 101.3 63 71.4
unitig_699.g19438 Utricularia gibba HOM05D000144 ORTHO05D008375 2.9e-20 101.3 72 66.7
FvH4_1g17680 Fragaria vesca HOM05D000144 ORTHO05D008375 3.8e-20 100.9 63 69.8
FAN19G2025 Fragaria x ananassa HOM05D000144 ORTHO05D008375 3.8e-20 100.9 63 69.8
FAN26G3316 Fragaria x ananassa HOM05D000144 ORTHO05D008375 3.8e-20 100.9 63 69.8
FAN28G1584 Fragaria x ananassa HOM05D000144 ORTHO05D008375 3.8e-20 100.9 63 69.8
AagrBONN_evm.TU.Sc2ySwM_368.588 Anthoceros agrestis HOM05D000144 ORTHO05D008375 1.4e-19 99.0 63 65.1
SMO356G0468 Selaginella moellendorffii HOM05D000144 ORTHO05D008375 2.5e-19 98.2 63 61.9
Aa31LG1G16080 Aethionema arabicum HOM05D000144 ORTHO05D008375 3.2e-19 97.8 64 68.8
Manes.12G114000 Manihot esculenta HOM05D000144 ORTHO05D008375 7.1e-19 96.7 63 71.4
EL10As2g23225 Beta vulgaris HOM05D000144 ORTHO05D008375 1.2e-18 95.9 62 72.6
Cre10.g457000 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D008375 1.5e-16 89.0 63 58.7
CBR_g31965 Chara braunii HOM05D000144 ORTHO05D008375 3.3e-16 87.8 53 67.9
AUR62040239 Chenopodium quinoa HOM05D000144 ORTHO05D008375 5.3e-14 80.5 43 81.4
Rhsim10G0099600 Rhododendron simsii HOM05D000144 ORTHO05D008375 6.9e-14 80.1 45 75.6
Peaxi162Scf00548g00659 Petunia axillaris HOM05D000144 ORTHO05D008375 2.0e-13 78.6 43 76.7
MCO14G312 Micromonas commoda HOM05D000144 ORTHO05D008375 7.6e-13 76.6 63 55.6
Lsat_1_v5_gn_8_75860 Lactuca sativa HOM05D000144 ORTHO05D008375 2.9e-12 74.7 43 74.4
Lj3g0021449 Lotus japonicus HOM05D000144 ORTHO05D008375 1.0e-09 66.2 41 70.7
AUR62004008 Chenopodium quinoa HOM05D000144 ORTHO05D008375 3.0e-09 64.7 84 47.6


User provided reference genes

Program Settings