Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g04231_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 3.1e-84 315.1 156 100.0
MBI04_g43159_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 7.0e-12 74.7 37 97.3
ATR0757G137 Amborella trichopoda HOM05D000921 ORTHO05D002852 9.1e-12 74.3 37 94.6
Aqoxy7G00539 Aquilegia oxysepala HOM05D000921 ORTHO05D002852 9.1e-12 74.3 37 94.6
TAR629G2419 Trochodendron aralioides HOM05D000921 ORTHO05D002852 9.1e-12 74.3 37 94.6
Nn1g01159 Nelumbo nucifera HOM05D000921 ORTHO05D002852 7.7e-11 71.2 37 91.9
Nn6g32827 Nelumbo nucifera HOM05D000921 ORTHO05D002852 7.7e-11 71.2 37 89.2
Nn6g34350 Nelumbo nucifera HOM05D000921 ORTHO05D002852 7.7e-11 71.2 37 89.2
TAR636G1827 Trochodendron aralioides HOM05D000921 ORTHO05D002852 7.7e-11 71.2 37 89.2
CiPaw.02G165500 Carya illinoinensis HOM05D000921 ORTHO05D002852 1.3e-10 70.5 53 66.0
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 1.7e-10 70.1 37 86.5
A04p01340 Brassica napus HOM05D000921 ORTHO05D002852 1.7e-10 70.1 37 86.5
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 1.7e-10 70.1 37 86.5
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 1.7e-10 70.1 37 86.5
BraA04t15853Z Brassica rapa HOM05D000921 ORTHO05D002852 1.7e-10 70.1 37 86.5
Ah.05g175310 Amaranthus hybridus HOM05D000921 ORTHO05D002852 2.2e-10 69.7 37 86.5
Dinv43732 Davidia involucrata HOM05D000921 ORTHO05D002852 2.2e-10 69.7 37 86.5
Potri.014G072600 Populus trichocarpa HOM05D000921 ORTHO05D002852 2.2e-10 69.7 37 86.5
Actinidia09569 Actinidia chinensis HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
EL10Ac1g00924 Beta vulgaris HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
CSS0003914 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
Dinv32396 Davidia involucrata HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 83.8
MBI11_g24763_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.9e-10 69.3 42 85.7
QL08p051741 Quercus lobata HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 83.8
Sp5g02330 Schrenkiella parvula HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
TWI14G1087 Tripterygium wilfordii HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
GSVIVG01027547001 Vitis vinifera HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 83.8
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 2.9e-10 69.3 37 86.5
Eucgr.E01352 Eucalyptus grandis HOM05D000921 ORTHO05D002852 3.8e-10 68.9 37 83.8
Peaxi162Scf00416g00310 Petunia axillaris HOM05D000921 ORTHO05D002852 3.8e-10 68.9 37 86.5
Thecc.01G372900 Theobroma cacao HOM05D000921 ORTHO05D002852 3.8e-10 68.9 37 86.5
AL4G44720 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
AT2G45540 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
Carub.0004s2816 Capsella rubella HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
CARHR140720 Cardamine hirsuta HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
AUR62013603 Chenopodium quinoa HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
Thhalv10001277m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
SGA_v2.0_scaffold303G47875 Striga asiatica HOM05D000921 ORTHO05D002852 5.0e-10 68.6 37 83.8
ClCG05G002030 Citrullus lanatus HOM05D000921 ORTHO05D002852 6.5e-10 68.2 37 83.8
Manes.05G043300 Manihot esculenta HOM05D000921 ORTHO05D002852 6.5e-10 68.2 37 83.8
Sp4g27560 Schrenkiella parvula HOM05D000921 ORTHO05D002852 6.5e-10 68.2 37 81.1
CARHR171310 Cardamine hirsuta HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 83.8
Ciclev10018468m.g Citrus clementina HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 81.1
CsaV3_3G009490 Cucumis sativus L. HOM05D000921 ORTHO05D002852 8.5e-10 67.8 41 75.6
Thhalv10005733m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 83.8
Gohir.A11G082900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 86.5
Gohir.D11G087000 Gossypium hirsutum HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 86.5
Gorai.007G092900 Gossypium raimondii HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 86.5
Sopen01g037870 Solanum pennellii HOM05D000921 ORTHO05D002852 8.5e-10 67.8 37 83.8
Cpa.g.sc18.151 Carica papaya HOM05D000921 ORTHO05D002852 1.1e-09 67.4 37 83.8
Oeu003495.3 Olea europaea HOM05D000921 ORTHO05D002852 1.1e-09 67.4 37 81.1
THA.LOC104827617 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 1.1e-09 67.4 37 83.8
Aa31LG1G27030 Aethionema arabicum HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
A05p05550 Brassica napus HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
BolC4t22272H Brassica oleracea HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
BraA05t19525Z Brassica rapa HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
CANSAT56G4522 Cannabis sativa HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
AUR62004245 Chenopodium quinoa HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 81.1
Sed0009254 Sechium edule HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 83.8
vmacro13368 Vaccinium macrocarpon HOM05D000921 ORTHO05D002852 1.5e-09 67.0 37 83.8
AL5G43240 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 83.8
arahy.Tifrunner.gnm1.ann1.P2FPY5 Arachis hypogaea HOM05D000921 ORTHO05D002852 1.9e-09 66.6 38 76.3
BcaC07g40611 Brassica carinata HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 81.1
C08p35860 Brassica napus HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 81.1
BolC8t51174H Brassica oleracea HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 81.1
COL.COLO4_12586 Corchorus olitorius HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 83.8
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 81.1
Lalb_Chr01g0021281 Lupinus albus HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 78.4
Nitab4.5_0002436g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 83.8
Nitab4.5_0005340g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 83.8
Potri.002G150000 Populus trichocarpa HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 83.8
Rhsim07G0024100 Rhododendron simsii HOM05D000921 ORTHO05D002852 1.9e-09 66.6 37 81.1
Carub.0005s2767 Capsella rubella HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 81.1
Lj9A573G74 Lonicera japonica HOM05D000921 ORTHO05D002852 2.5e-09 66.2 38 81.6
LjContig00136g0027596 Lotus japonicus HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 78.4
MBI12_g38016_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 81.1
Oeu029683.1 Olea europaea HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 78.4
RcHm_v2.0_Chr1g0351141 Rosa chinensis HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 78.4
unitig_22.g5373 Utricularia gibba HOM05D000921 ORTHO05D002852 2.5e-09 66.2 37 75.7
AT3G60920 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 3.2e-09 65.9 37 81.1
Lj7C526G8 Lonicera japonica HOM05D000921 ORTHO05D002852 3.2e-09 65.9 40 80.0
PSO478G4503 Papaver somniferum HOM05D000921 ORTHO05D002852 3.2e-09 65.9 37 83.8
MELO3C006169.2 Cucumis melo HOM05D000921 ORTHO05D002852 4.2e-09 65.5 41 73.2
Sc02g0002400 Simmondsia chinensis HOM05D000921 ORTHO05D002852 4.2e-09 65.5 37 81.1
Ca_07837_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 5.5e-09 65.1 37 78.4
DCAR_025120 Daucus carota HOM05D000921 ORTHO05D002852 5.5e-09 65.1 37 81.1
FAN10G3046 Fragaria x ananassa HOM05D000921 ORTHO05D002852 5.5e-09 65.1 38 76.3
FAN10G3969 Fragaria x ananassa HOM05D000921 ORTHO05D002852 5.5e-09 65.1 38 76.3
MD02G1199600 Malus domestica HOM05D000921 ORTHO05D002852 5.5e-09 65.1 37 78.4
Aa31LG10G15130 Aethionema arabicum HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 75.7
Cc02_g36420 Coffea canephora HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
FvH4_7g12350 Fragaria vesca HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
FAN03G0226 Fragaria x ananassa HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
FAN06G2098 Fragaria x ananassa HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
FAN06G4917 Fragaria x ananassa HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
Lj3g0001885 Lotus japonicus HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 75.7
Medtr7g075660 Medicago truncatula HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
Psat3g104040 Pisum sativum HOM05D000921 ORTHO05D002852 7.2e-09 64.7 37 78.4
CDE11G1134 Ceratophyllum demersum HOM05D000921 ORTHO05D002852 9.4e-09 64.3 37 75.7
Glyma.09G267100 Glycine max HOM05D000921 ORTHO05D002852 9.4e-09 64.3 37 75.7
Glyma.18G223300 Glycine max HOM05D000921 ORTHO05D002852 9.4e-09 64.3 37 75.7
TPR.G37773 Trifolium pratense HOM05D000921 ORTHO05D002852 9.4e-09 64.3 37 78.4
Phvul.008G074600 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 1.2e-08 63.9 40 70.0
Atru.chr5.339 Acer truncatum HOM05D000921 ORTHO05D002852 1.6e-08 63.5 37 81.1
A09p53140 Brassica napus HOM05D000921 ORTHO05D002852 1.6e-08 63.5 37 78.4
BraA09t40739Z Brassica rapa HOM05D000921 ORTHO05D002852 1.6e-08 63.5 37 78.4
Lsat_1_v5_gn_7_7601 Lactuca sativa HOM05D000921 ORTHO05D002852 1.6e-08 63.5 37 78.4
BcaC07g42649 Brassica carinata HOM05D000921 ORTHO05D002852 2.1e-08 63.2 37 78.4
PSO782G1119 Papaver somniferum HOM05D000921 ORTHO05D002852 2.1e-08 63.2 37 78.4
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 2.1e-08 63.2 37 78.4
THA.LOC104801996 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 2.1e-08 63.2 37 78.4
MBI09_g39943_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.7e-08 62.8 37 78.4
Sed0001143 Sechium edule HOM05D000921 ORTHO05D002852 2.7e-08 62.8 37 75.7
VMungo1383G3171 Vigna mungo HOM05D000921 ORTHO05D002852 2.7e-08 62.8 37 73.0
arahy.Tifrunner.gnm1.ann1.JZMQ8V Arachis hypogaea HOM05D000921 ORTHO05D002852 3.6e-08 62.4 37 75.7
ECA236G3038 Erigeron canadensis HOM05D000921 ORTHO05D002852 3.6e-08 62.4 37 73.0
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 4.7e-08 62.0 37 81.1
arahy.Tifrunner.gnm1.ann1.4FT79Q Arachis hypogaea HOM05D000921 ORTHO05D002852 6.1e-08 61.6 37 73.0
HanXRQChr04g0122231 Helianthus annuus HOM05D000921 ORTHO05D002852 6.1e-08 61.6 37 75.7
MBI12_g31452_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.0e-07 60.8 35 82.9
AagrBONN_evm.TU.Sc2ySwM_117.767 Anthoceros agrestis HOM05D000921 ORTHO05D002852 1.4e-07 60.5 37 70.3
AagrBONN_evm.TU.Sc2ySwM_368.3442 Anthoceros agrestis HOM05D000921 ORTHO05D002852 1.4e-07 60.5 37 70.3
Gohir.A08G128400 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.0e-07 59.3 37 73.0
Gohir.D08G149700 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.0e-07 59.3 37 73.0
Gorai.004G155500 Gossypium raimondii HOM05D000921 ORTHO05D002852 3.0e-07 59.3 37 73.0
Lalb_Chr07g0189601 Lupinus albus HOM05D000921 ORTHO05D002852 3.0e-07 59.3 37 70.3
Os02g0663300 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 6.7e-07 58.2 37 75.7
HPP92_009978 Vanilla planifolia HOM05D000921 ORTHO05D002852 6.7e-07 58.2 37 73.0
Gohir.D08G042866 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.2e-06 57.4 37 73.0
Gohir.D08G042932 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.2e-06 57.4 37 73.0
Gorai.004G041500 Gossypium raimondii HOM05D000921 ORTHO05D002852 1.2e-06 57.4 37 73.0
Medtr8g035750 Medicago truncatula HOM05D000921 ORTHO05D002852 2.0e-06 56.6 37 67.6
HPP92_003358 Vanilla planifolia HOM05D000921 ORTHO05D002852 2.0e-06 56.6 38 68.4
Psat4g150320 Pisum sativum HOM05D000921 ORTHO05D002852 2.6e-06 56.2 37 67.6
SMO347G0262 Selaginella moellendorffii HOM05D000921 ORTHO05D002852 2.6e-06 56.2 37 62.2
DCAR_006882 Daucus carota HOM05D000921 ORTHO05D002852 3.3e-06 55.8 37 67.6
Gohir.A08G031900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.3e-06 55.8 37 70.3
Ca_23830_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 4.4e-06 55.5 37 62.2
Haze_16736 Corylus avellana HOM05D000921 ORTHO05D002852 4.4e-06 55.5 49 63.3
Pp3c25_6190 Physcomitrium patens HOM05D000921 ORTHO05D002852 7.5e-06 54.7 37 67.6
Pp3c8_11180 Physcomitrium patens HOM05D000921 ORTHO05D002852 9.7e-06 54.3 37 64.9


User provided reference genes

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