Gene: AT2G45540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G45540
  • Transcript Identifier AT2G45540.1
  • Gene Type Coding gene
  • Location Chr2 : 18757881-18772229 : negative

Gene Family Information

  • ID HOM05D000921
  • #Genes/#Species 653/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G45540.1
  • Alias BCHC2,Beach-Domain Homolog C2
  • uniprot F4IG73

Descriptions

  • Description WD-40 repeat family protein / beige-like protein
  • Computational description WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1); Has 15175 Blast hits to 9236 proteins in 536 species: Archae - 8; Bacteria - 4185; Metazoa - 4754; Fungi - 2919; Plants - 1203; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036372 BEACH domain superfamily
IPR000409 BEACH domain
IPR023362 PH-BEACH domain
IPR036322 WD40-repeat-containing domain superfamily
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR031570 Domain of unknown function DUF4704
IPR011993 PH-like domain superfamily
IPR001680 WD40 repeat
Mapman id Description
35.1 not assigned.annotated