Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g04865_MAGBIO Magnolia biondii HOM05D000492 ORTHO05D243934 4.9e-76 287.7 145 100.0
Nitab4.5_0005244g0080 Nicotiana tabacum HOM05D000492 ORTHO05D000499 5.0e-12 75.1 180 35.0
Nitab4.5_0000635g0160 Nicotiana tabacum HOM05D000492 ORTHO05D000499 2.5e-11 72.8 199 32.7
Nitab4.5_0010085g0010 Nicotiana tabacum HOM05D000492 ORTHO05D000003 3.2e-11 72.4 200 32.5
MBI16_g18216_MAGBIO Magnolia biondii HOM05D000492 ORTHO05D000499 7.2e-11 71.2 234 33.3
Actinidia39299 Actinidia chinensis HOM05D000492 ORTHO05D000499 2.7e-10 69.3 224 31.7
Peaxi162Scf00608g00058 Petunia axillaris HOM05D000492 ORTHO05D000499 2.7e-10 69.3 213 32.9
Gohir.D12G140801 Gossypium hirsutum HOM05D000492 ORTHO05D000499 3.0e-09 65.9 231 30.3
Gorai.008G152200 Gossypium raimondii HOM05D000492 ORTHO05D000499 3.0e-09 65.9 231 30.3
CSS0046361 Camellia sinensis var. sinensis HOM05D000492 ORTHO05D000499 3.9e-09 65.5 231 30.7
FvH4_3g04130 Fragaria vesca HOM05D000492 ORTHO05D000499 3.9e-09 65.5 232 29.3
FAN11G2567 Fragaria x ananassa HOM05D000492 ORTHO05D000499 3.9e-09 65.5 232 29.3
FAN16G2324 Fragaria x ananassa HOM05D000492 ORTHO05D000499 3.9e-09 65.5 232 29.3
FAN21G2020 Fragaria x ananassa HOM05D000492 ORTHO05D000499 3.9e-09 65.5 232 29.3
FAN25G3045 Fragaria x ananassa HOM05D000492 ORTHO05D000499 3.9e-09 65.5 232 29.3
Thecc.02G172600 Theobroma cacao HOM05D000492 ORTHO05D000499 3.9e-09 65.5 231 30.7
GSVIVG01030578001 Vitis vinifera HOM05D000492 ORTHO05D000499 3.9e-09 65.5 220 30.0
Aqoxy1G02753 Aquilegia oxysepala HOM05D000492 ORTHO05D000499 6.7e-09 64.7 231 29.4
Cpa.g.sc27.114 Carica papaya HOM05D000492 ORTHO05D000499 6.7e-09 64.7 232 31.9
ClCG03G005560 Citrullus lanatus HOM05D000492 ORTHO05D000499 6.7e-09 64.7 232 30.6
Lj6g0026403 Lotus japonicus HOM05D000492 ORTHO05D000499 6.7e-09 64.7 231 31.2
Medtr4g090900 Medicago truncatula HOM05D000492 ORTHO05D000499 6.7e-09 64.7 231 29.9
Nn8g41279 Nelumbo nucifera HOM05D000492 ORTHO05D000499 6.7e-09 64.7 231 31.2
Prupe.4G036000 Prunus persica HOM05D000492 ORTHO05D000499 6.7e-09 64.7 232 29.7
ATR0057G107 Amborella trichopoda HOM05D000492 ORTHO05D000499 8.8e-09 64.3 235 30.2
RcHm_v2.0_Chr5g0006581 Rosa chinensis HOM05D000492 ORTHO05D000499 8.8e-09 64.3 232 30.2
Glyma.08G058300 Glycine max HOM05D000492 ORTHO05D000499 1.1e-08 63.9 231 30.7
Lj4g0006949 Lotus japonicus HOM05D000492 ORTHO05D000499 1.1e-08 63.9 231 31.2
Sed0012593 Sechium edule HOM05D000492 ORTHO05D000499 1.1e-08 63.9 233 27.9
COL.COLO4_31571 Corchorus olitorius HOM05D000492 ORTHO05D000499 1.5e-08 63.5 232 29.3
MELO3C002559.2 Cucumis melo HOM05D000492 ORTHO05D000499 1.5e-08 63.5 232 30.2
CsaV3_1G011820 Cucumis sativus L. HOM05D000492 ORTHO05D000499 1.5e-08 63.5 232 30.2
Lalb_Chr15g0090091 Lupinus albus HOM05D000492 ORTHO05D000499 1.5e-08 63.5 231 30.3
Potri.004G035400 Populus trichocarpa HOM05D000492 ORTHO05D000499 2.0e-08 63.2 232 29.3
PGR004G2450 Punica granatum HOM05D000492 ORTHO05D000499 2.0e-08 63.2 231 30.3
Sabra04G0021200 Salix brachista HOM05D000492 ORTHO05D000499 2.0e-08 63.2 232 29.3
Medtr2g012270 Medicago truncatula HOM05D000492 ORTHO05D000499 2.5e-08 62.8 231 29.4
Peaxi162Scf00485g00052 Petunia axillaris HOM05D000492 ORTHO05D000499 2.5e-08 62.8 231 29.9
Haze_06564 Corylus avellana HOM05D000492 ORTHO05D000499 3.3e-08 62.4 232 29.7
Lalb_Chr18g0059901 Lupinus albus HOM05D000492 ORTHO05D000499 3.3e-08 62.4 231 29.9
Oeu010940.1 Olea europaea HOM05D000492 ORTHO05D000499 3.3e-08 62.4 231 29.9
Cfa000361 Carpinus fangiana HOM05D000492 ORTHO05D000499 4.3e-08 62.0 232 29.7
Gohir.D06G211800 Gossypium hirsutum HOM05D000492 ORTHO05D000499 4.3e-08 62.0 231 30.7
Gorai.010G254400 Gossypium raimondii HOM05D000492 ORTHO05D000499 4.3e-08 62.0 231 30.7
Oeu041298.1 Olea europaea HOM05D000492 ORTHO05D000499 4.3e-08 62.0 231 29.9
Ca_00266_v3 Cicer arietinum L. HOM05D000492 ORTHO05D000499 5.7e-08 61.6 231 29.4
Gohir.A06G209200 Gossypium hirsutum HOM05D000492 ORTHO05D000499 5.7e-08 61.6 231 30.7
MD10G1302400 Malus domestica HOM05D000492 ORTHO05D000499 5.7e-08 61.6 232 29.7
PSO541G1577 Papaver somniferum HOM05D000492 ORTHO05D000499 5.7e-08 61.6 231 29.9
Psat1g208200 Pisum sativum HOM05D000492 ORTHO05D000499 5.7e-08 61.6 231 29.4
Potri.011G043700 Populus trichocarpa HOM05D000492 ORTHO05D000499 5.7e-08 61.6 232 28.9
AL2G15020 Arabidopsis lyrata HOM05D000492 ORTHO05D000499 7.4e-08 61.2 231 29.9
Gohir.A10G020400 Gossypium hirsutum HOM05D000492 ORTHO05D000499 7.4e-08 61.2 231 29.9
MD05G1324600 Malus domestica HOM05D000492 ORTHO05D000499 7.4e-08 61.2 232 29.3
Sopen12g001530 Solanum pennellii HOM05D000492 ORTHO05D000499 7.4e-08 61.2 231 28.1
Gohir.D10G021200 Gossypium hirsutum HOM05D000492 ORTHO05D000499 9.7e-08 60.8 231 29.9
Lalb_Chr20g0122241 Lupinus albus HOM05D000492 ORTHO05D000499 9.7e-08 60.8 231 30.3
PSO675G3574 Papaver somniferum HOM05D000492 ORTHO05D000499 9.7e-08 60.8 231 29.4
QL12p027171 Quercus lobata HOM05D000492 ORTHO05D000499 9.7e-08 60.8 232 30.2
TPR.G36774 Trifolium pratense HOM05D000492 ORTHO05D000499 1.3e-07 60.5 231 29.4
Phvul.002G222900 Phaseolus vulgaris HOM05D000492 ORTHO05D000499 1.7e-07 60.1 231 30.3
CAN.G980.15 Capsicum annuum HOM05D000492 ORTHO05D000499 2.2e-07 59.7 231 28.6
CiPaw.10G119200 Carya illinoinensis HOM05D000492 ORTHO05D000499 2.2e-07 59.7 232 28.0
Ciclev10017913m.g Citrus clementina HOM05D000492 ORTHO05D000499 2.2e-07 59.7 221 29.9
Duzib235G0920 Durio zibethinus HOM05D000492 ORTHO05D000499 2.2e-07 59.7 232 29.7
THA.LOC104809548 Tarenaya hassleriana HOM05D000492 ORTHO05D000499 2.2e-07 59.7 231 29.9
CANSAT56G1978 Cannabis sativa HOM05D000492 ORTHO05D000499 2.8e-07 59.3 232 28.0
Psat0s1616g0120 Pisum sativum HOM05D000492 ORTHO05D000499 2.8e-07 59.3 231 29.0
GSVIVG01006716001 Vitis vinifera HOM05D000492 ORTHO05D000499 3.7e-07 58.9 231 30.3
CAN.G168.23 Capsicum annuum HOM05D000492 ORTHO05D000499 4.8e-07 58.5 233 29.2
Glyma.15G068000 Glycine max HOM05D000492 ORTHO05D000499 4.8e-07 58.5 231 29.0
Gorai.011G022300 Gossypium raimondii HOM05D000492 ORTHO05D000499 4.8e-07 58.5 232 30.6
Solyc10g008570.3 Solanum lycopersicum HOM05D000492 ORTHO05D000003 4.8e-07 58.5 233 28.3
Solyc12g005580.2 Solanum lycopersicum HOM05D000492 ORTHO05D000499 4.8e-07 58.5 231 27.7
VMungo0251G3594 Vigna mungo HOM05D000492 ORTHO05D000499 4.8e-07 58.5 231 29.9
Rhsim13G0173700 Rhododendron simsii HOM05D000492 ORTHO05D000499 6.3e-07 58.2 232 30.6
EL10Ac8g20001 Beta vulgaris HOM05D000492 ORTHO05D000499 8.2e-07 57.8 193 31.1
Glyma.13G245800 Glycine max HOM05D000492 ORTHO05D000499 8.2e-07 57.8 231 29.0
CSS0019476 Camellia sinensis var. sinensis HOM05D000492 ORTHO05D000499 1.1e-06 57.4 200 30.5
Duzib192G0812 Durio zibethinus HOM05D000492 ORTHO05D000499 1.1e-06 57.4 232 29.3
AT1G61290 Arabidopsis thaliana HOM05D000492 ORTHO05D000499 1.4e-06 57.0 231 29.4
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 1.4e-06 57.0 155 30.3
Phvul.006G191600 Phaseolus vulgaris HOM05D000492 ORTHO05D000499 1.4e-06 57.0 219 28.3
Sp2g03190 Schrenkiella parvula HOM05D000492 ORTHO05D000499 1.4e-06 57.0 231 29.9
Sed0012645 Sechium edule HOM05D000492 ORTHO05D000499 1.4e-06 57.0 232 28.4
PGSC0003DMG400013748 Solanum tuberosum HOM05D000492 ORTHO05D000499 1.4e-06 57.0 231 28.6
PGSC0003DMG401021662 Solanum tuberosum HOM05D000492 ORTHO05D000499 1.8e-06 56.6 233 27.5
TPR.G32402 Trifolium pratense HOM05D000492 ORTHO05D000499 1.8e-06 56.6 231 29.4
TAR629G1445 Trochodendron aralioides HOM05D000492 ORTHO05D000499 1.8e-06 56.6 231 29.0
BcaC07g38646 Brassica carinata HOM05D000492 ORTHO05D000499 2.4e-06 56.2 214 29.4
BolC8t49056H Brassica oleracea HOM05D000492 ORTHO05D000499 2.4e-06 56.2 214 29.4
BraA08t35274Z Brassica rapa HOM05D000492 ORTHO05D000499 2.4e-06 56.2 214 29.4
Eucgr.D00709 Eucalyptus grandis HOM05D000492 ORTHO05D000499 2.4e-06 56.2 232 30.2
Thhalv10023607m.g Eutrema salsugineum HOM05D000492 ORTHO05D000499 2.4e-06 56.2 231 29.4
Rhsim04G0065700 Rhododendron simsii HOM05D000492 ORTHO05D000499 2.4e-06 56.2 242 28.5
AUR62012655 Chenopodium quinoa HOM05D000492 ORTHO05D000499 3.1e-06 55.8 229 28.8
vmacro09264 Vaccinium macrocarpon HOM05D000492 ORTHO05D000499 3.1e-06 55.8 95 38.9
C08p14180 Brassica napus HOM05D000492 ORTHO05D000499 4.1e-06 55.5 214 29.4
Duzib160G0861 Durio zibethinus HOM05D000492 ORTHO05D000499 4.1e-06 55.5 230 27.4
Thhalv10008327m.g Eutrema salsugineum HOM05D000492 ORTHO05D000499 4.1e-06 55.5 214 29.4
Sabra11G0030300 Salix brachista HOM05D000492 ORTHO05D000499 4.1e-06 55.5 232 27.6
CARHR051320 Cardamine hirsuta HOM05D000492 ORTHO05D000499 5.3e-06 55.1 231 29.9
AUR62021997 Chenopodium quinoa HOM05D000492 ORTHO05D000499 5.3e-06 55.1 221 29.0
AT1G11250 Arabidopsis thaliana HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 28.0
BcaB03g13268 Brassica carinata HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 29.4
A08p33580 Brassica napus HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 29.4
BraA09t41799Z Brassica rapa HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 29.4
Sp1g09910 Schrenkiella parvula HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 29.9
VMungo0540G0567 Vigna mungo HOM05D000492 ORTHO05D000499 6.9e-06 54.7 214 29.0
Eucgr.E03461 Eucalyptus grandis HOM05D000492 ORTHO05D000499 9.1e-06 54.3 232 27.6


User provided reference genes

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