Gene: Solyc10g008570.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g008570.3
  • Transcript Identifier Solyc10g008570.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 2556243-2559680 : negative

Gene Family Information

  • ID HOM05D000492
  • #Genes/#Species 1080/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g008570.3.1
  • uniprot A0A3Q7ICD1
  • gene_id Solyc10g008570

Descriptions

  • Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2VRV6_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048278
IBA
GOA Databasevesicle docking
GO:0006886
IBA
IEA
GOA Databaseintracellular protein transport
GO:0006887
IBA
GOA Databaseexocytosis
GO:0006906
IBA
GOA Databasevesicle fusion
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
GOA DatabaseSNARE binding
GO:0005484
IBA
IEA
GOA DatabaseSNAP receptor activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0012505
IBA
GOA Databaseendomembrane system
GO:0031201
IBA
GOA DatabaseSNARE complex
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0016021
IBA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000727 Target SNARE coiled-coil homology domain
IPR002885 Pentatricopeptide repeat
IPR006011 Syntaxin, N-terminal domain
IPR010989 SNARE
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
22.3.5.1.1.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP1-group component